Help:

• Tutorials
• Example 1; functional estimation of a gene. (ACTR3)
• Example 2; making gene lists for a particular biological function. (virus response)
• Presentation documents (PDF, English)
• 2010-03-10: Effectiveness of MR (AYRCOB, Tainan)
• 2009-07-29: COXPRESdb_Introduction.pdf (IUPS2009, Kyoto)
• 2009-07-29: COXPRESdb_Tutorial.pdf (IUPS2009, Kyoto)
• Presentation documents (PDF, Japanese)
• 2009-08-26: COXPRESdb_ver4-0.pdf (Japanese) (Transportsome meeting, Kumamoto)
• Methods
• Coexpression (ver.2)
• Source of gene expression data
• Human (GPL570); 123 experiments released by NCBI GEO
• Mouse (GPL1261); 154 experiments released by NCBI GEO
• Rat (GPL1355); 154 experiments released by NCBI GEO
• Calculation
• Coexpressed gene network
• Rank and Mutual Rank
• Selection of genes to draw
• Coexpressed gene network
• Coexpressed gene search from multi-gene query
• Terms
• terms in COXPRESdb
  
  
• Browser environments
• Properly operated
• Windows XP; Internet Explorer 6.0, Firefox 2.0
• Mac OX 10.4; Firefox 2.0
• Something wrong
• Mac OX 10.4; Safari 2.0 (clickable map of expression viewer and coexpression viewer)
• Mac OX 10.4; Opera 9.10 (clickable map of expression viewer and coexpression viewer, window size of Google Maps)