[←][→] dre  pabpc1a Gene
functional annotation
Function   poly(A) binding protein, cytoplasmic 1a  
GO BP
GO:0006417 [list] [network] regulation of translation  (168 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (309 genes)  IEA  
GO:0006412 [list] [network] translation  (311 genes)  IEA  
GO:0007507 [list] [network] heart development  (543 genes)  IMP  
GO CC
GO:0010494 [list] [network] cytoplasmic stress granule  (27 genes)  IBA  
GO:1990904 [list] [network] ribonucleoprotein complex  (488 genes)  IBA  
GO:0005829 [list] [network] cytosol  (1015 genes)  IBA  
GO:0005634 [list] [network] nucleus  (4679 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (7473 genes)  IEA  
GO MF
GO:0008266 [list] [network] poly(U) RNA binding  (8 genes)  IBA  
GO:0008143 [list] [network] poly(A) binding  (12 genes)  IBA  
GO:0003730 [list] [network] mRNA 3'-UTR binding  (67 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (934 genes)  IBA IEA  
GO:0003676 [list] [network] nucleic acid binding  (3107 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3679 genes)  IPI  
KEGG dre03015 [list] [network] mRNA surveillance pathway (99 genes)
dre03018 [list] [network] RNA degradation (86 genes)
Protein NP_001026846.1  XP_005169828.1 
BLAST NP_001026846.1  XP_005169828.1 
Orthologous [Ortholog page] PABPC3 (hsa)  PABPC4 (hsa)  Pabpc1 (mmu)  Pabpc2 (mmu)  PABPC1 (hsa)  pAbp (dme)  Pabpc6 (mmu)  PABPC1L (hsa)  PABPC4L (hsa)  Pabpc1 (rno)  pab-1 (cel)  pab-2 (cel)  Pabpc4 (mmu)  Pabpc4l (mmu)  Pabpc2 (rno)  Pabpc6 (rno)  Pabpc4l (rno)  Pabpc1l (rno)  Pabpc4 (rno)  pabpc4 (dre)  pabpc1l (dre)  Pabpc1l (mmu)  pabpc1b (dre)  PABPC1L (gga)  PABPC4 (gga)  PABPC1 (gga)  PABPC1L (cfa)  PABPC4 (cfa)  PABPC4L (cfa)  PABPC1 (cfa)  PABPC4L (mcc)  PABPC1 (mcc)  LOC708443 (mcc)  PABPC3 (mcc)  PABPC1L (mcc)  PABPC4 (mcc)  PAB1 (sce)  pkl1 (spo)  klp2 (spo)  PABPC4L (fca)  PABPC1 (fca)  PABPC1L (fca)  PABPC4 (fca)  LOC114675563 (mcc) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001026846.1)
nucl 10  (predict for XP_005169828.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
dre03010 Ribosome 5
dre03015 mRNA surveillance pathway 3
dre03018 RNA degradation 2
dre03013 Nucleocytoplasmic transport 2
dre04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with pabpc1a on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.5 eef2b eukaryotic translation elongation factor 2b [detail] 326929
9.7 ybx1 Y box binding protein 1 [detail] 795398
9.5 eef1a1l1 eukaryotic translation elongation factor 1 alpha 1, like 1 [detail] 30516
5.7 pabpc1b poly A binding protein, cytoplasmic 1 b [detail] 393856
Coexpressed
gene list		 [Coexpressed gene list for pabpc1a]
Gene expression
All samples [Expression pattern for all samples]
Tissue specificity*
Link to other DBs
Entrez Gene ID 606498      
Refseq ID (protein) NP_001026846.1 
XP_005169828.1 


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