KEGG 03015 mRNA surveillance pathway
[list]

Species hsa(Human) mmu(Mouse) rno(Rat) gga(Chicken) dre(Zebrafish) dme(Fly) cel(Nematoda) mcc(Monkey) cfa(Dog) sce(Budding yeast) spo(Fission yeast) fca(Domestic cat)
UMAP
Representative coexpressed gene network LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hsa03015 mRNA surveillance pathway 30
hsa03013 Nucleocytoplasmic transport 10
hsa04530 Tight junction 7
hsa05165 Human papillomavirus infection 6
hsa04261 Adrenergic signaling in cardiomyocytes 6
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mmu03015 mRNA surveillance pathway 43
mmu03013 Nucleocytoplasmic transport 16
mmu03040 Spliceosome 12
mmu04071 Sphingolipid signaling pathway 7
mmu04151 PI3K-Akt signaling pathway 7
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
rno03015 mRNA surveillance pathway 45
rno03013 Nucleocytoplasmic transport 16
rno03040 Spliceosome 9
rno04071 Sphingolipid signaling pathway 6
rno04151 PI3K-Akt signaling pathway 6
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gga03015 mRNA surveillance pathway 34
gga03013 Nucleocytoplasmic transport 15
gga03040 Spliceosome 11
gga03008 Ribosome biogenesis in eukaryotes 4
gga05164 Influenza A 4
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
dre03015 mRNA surveillance pathway 61
dre03013 Nucleocytoplasmic transport 20
dre03040 Spliceosome 16
dre04261 Adrenergic signaling in cardiomyocytes 12
dre04114 Oocyte meiosis 10
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
dme03015 mRNA surveillance pathway 49
dme03040 Spliceosome 18
dme03013 Nucleocytoplasmic transport 18
dme04120 Ubiquitin mediated proteolysis 2
dme04013 MAPK signaling pathway - fly 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cel03015 mRNA surveillance pathway 40
cel03013 Nucleocytoplasmic transport 13
cel03040 Spliceosome 9
cel04350 TGF-beta signaling pathway 3
cel04310 Wnt signaling pathway 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mcc03015 mRNA surveillance pathway 43
mcc03013 Nucleocytoplasmic transport 16
mcc03040 Spliceosome 13
mcc04261 Adrenergic signaling in cardiomyocytes 5
mcc04728 Dopaminergic synapse 5
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cfa03015 mRNA surveillance pathway 33
cfa03013 Nucleocytoplasmic transport 15
cfa03040 Spliceosome 6
cfa04114 Oocyte meiosis 4
cfa04261 Adrenergic signaling in cardiomyocytes 4
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sce03015 mRNA surveillance pathway 22
sce04111 Cell cycle - yeast 5
sce04113 Meiosis - yeast 5
sce04136 Autophagy - other 2
sce04138 Autophagy - yeast 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
spo03015 mRNA surveillance pathway 18
spo04113 Meiosis - yeast 5
spo03013 Nucleocytoplasmic transport 5
spo04111 Cell cycle - yeast 3
spo03018 RNA degradation 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
fca03015 mRNA surveillance pathway 40
fca03013 Nucleocytoplasmic transport 16
fca03040 Spliceosome 10
fca04261 Adrenergic signaling in cardiomyocytes 6
fca04728 Dopaminergic synapse 6
Gene list in the network
Symbol Function*
CDK11B cyclin dependent kinase 11B
CSNK1A1 casein kinase 1 alpha 1
ETF1 eukaryotic translation termination factor 1
GTF2E2 general transcription factor IIE subunit 2
HSPA4 heat shock protein family A (Hsp70) member 4
ILF2 interleukin enhancer binding factor 2
PPP1CB protein phosphatase 1 catalytic subunit beta
PPP2CA protein phosphatase 2 catalytic subunit alpha
PPP2CB protein phosphatase 2 catalytic subunit beta
PPP2R1A protein phosphatase 2 scaffold subunit Aalpha
PPP2R2A protein phosphatase 2 regulatory subunit Balpha
UPF1 UPF1 RNA helicase and ATPase
SRSF1 serine and arginine rich splicing factor 1
SF1 splicing factor 1
SYMPK symplekin
RNGTT RNA guanylyltransferase and 5'-phosphatase
PABPC4 poly(A) binding protein cytoplasmic 4
EIF4A3 eukaryotic translation initiation factor 4A3
SMG7 SMG7 nonsense mediated mRNA decay factor
RBM8A RNA binding motif protein 8A
RBM12 RNA binding motif protein 12
TRIM28 tripartite motif containing 28
ALYREF Aly/REF export factor
SRRM1 serine and arginine repetitive matrix 1
SMNDC1 survival motor neuron domain containing 1
NXF1 nuclear RNA export factor 1
HBS1L HBS1 like translational GTPase
CPSF6 cleavage and polyadenylation specific factor 6
DDX19B DEAD-box helicase 19B
CASC3 CASC3 exon junction complex subunit
ACIN1 apoptotic chromatin condensation inducer 1
CSTF2T cleavage stimulation factor subunit 2 tau variant
SMG5 SMG5 nonsense mediated mRNA decay factor
TARDBP TAR DNA binding protein
PABPC1 poly(A) binding protein cytoplasmic 1
PCF11 PCF11 cleavage and polyadenylation factor subunit
DDX19A DEAD-box helicase 19A
PPP2R2D protein phosphatase 2 regulatory subunit Bdelta
CPSF7 cleavage and polyadenylation specific factor 7
FIP1L1 factor interacting with PAPOLA and CPSF1
YTHDC1 YTH domain containing 1
PATL1 PAT1 homolog 1, processing body mRNA decay factor
Symbol Function*
Ddx19a DEAD box helicase 19a
Gspt1 G1 to S phase transition 1
Hnrnpab heterogeneous nuclear ribonucleoprotein A/B
Magoh mago homolog, exon junction complex core component
Pabpc1 poly(A) binding protein, cytoplasmic 1
Pabpc2 poly(A) binding protein, cytoplasmic 2
Papola poly (A) polymerase alpha
Pnn pinin
Ppp2ca protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
Upf1 UPF1 regulator of nonsense transcripts homolog (yeast)
Dpf2 D4, zinc and double PHD fingers family 2
Rnps1 RNA binding protein with serine rich domain 1
Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
Snrnp70 small nuclear ribonucleoprotein 70 (U1)
Snrpd1 small nuclear ribonucleoprotein D1
Alyref Aly/REF export factor
Ppp2r5e protein phosphatase 2, regulatory subunit B', epsilon
Cpsf2 cleavage and polyadenylation specific factor 2
Ppp2r1a protein phosphatase 2, regulatory subunit A, alpha
Fubp1 far upstream element (FUSE) binding protein 1
Ppp2r2d protein phosphatase 2, regulatory subunit B, delta
Nxf1 nuclear RNA export factor 1
Ddx39b DEAD box helicase 39b
Caprin1 cell cycle associated protein 1
Pabpn1 poly(A) binding protein, nuclear 1
Acin1 apoptotic chromatin condensation inducer 1
Akap8 A kinase (PRKA) anchor protein 8
Papolb poly (A) polymerase beta (testis specific)
Ppp2r3c protein phosphatase 2, regulatory subunit B'', gamma
Rbm8a RNA binding motif protein 8a
Sarnp SAP domain containing ribonucleoprotein
Magohb mago homolog B, exon junction complex core component
Rbm22 RNA binding motif protein 22
Fip1l1 FIP1 like 1 (S. cerevisiae)
Upf3a UPF3 regulator of nonsense transcripts homolog A (yeast)
Rbm25 RNA binding motif protein 25
Pabpc6 poly(A) binding protein, cytoplasmic 6
Luc7l3 LUC7-like 3 (S. cerevisiae)
Upf3b UPF3 regulator of nonsense transcripts homolog B (yeast)
Sympk symplekin
Nudt21 nudix (nucleoside diphosphate linked moiety X)-type motif 21
Ints1 integrator complex subunit 1
Trir telomerase RNA component interacting RNase
Gtf3c2 general transcription factor IIIC, polypeptide 2, beta
Ppp2r2a protein phosphatase 2, regulatory subunit B, alpha
Ppp2r1b protein phosphatase 2, regulatory subunit A, beta
Wdr33 WD repeat domain 33
Gle1 GLE1 RNA export mediator (yeast)
Naa15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit
Srrt serrate RNA effector molecule homolog (Arabidopsis)
Mrpl1 mitochondrial ribosomal protein L1
Cpsf1 cleavage and polyadenylation specific factor 1
Smg6 SMG6 nonsense mediated mRNA decay factor
Cbll1 Casitas B-lineage lymphoma-like 1
Pfdn4 prefoldin 4
Srsf1 serine and arginine-rich splicing factor 1
D1Pas1 DNA segment, Chr 1, Pasteur Institute 1
Casc3 cancer susceptibility candidate 3
Eif4a3 eukaryotic translation initiation factor 4A3
Smg7 SMG7 nonsense mediated mRNA decay factor
Kansl3 KAT8 regulatory NSL complex subunit 3
Smg5 SMG5 nonsense mediated mRNA decay factor
Pabpc4 poly(A) binding protein, cytoplasmic 4
Tardbp TAR DNA binding protein
Fsip2 fibrous sheath-interacting protein 2
Cpsf7 cleavage and polyadenylation specific factor 7
Cpsf6 cleavage and polyadenylation specific factor 6
Symbol Function*
Gspt1 G1 to S phase transition 1
Ppp2ca protein phosphatase 2 catalytic subunit alpha
Ppp2cb protein phosphatase 2 catalytic subunit beta
Zranb2 zinc finger RANBP2-type containing 2
Vapa VAMP associated protein A
Nxf1 nuclear RNA export factor 1
Amd1 adenosylmethionine decarboxylase 1
Ddx39b DExD-box helicase 39B
Pabpn1 poly(A) binding protein, nuclear 1
Ppp2r2a protein phosphatase 2, regulatory subunit B, alpha
Cand1 cullin-associated and neddylation-dissociated 1
Ppp2r1a protein phosphatase 2 scaffold subunit A alpha
Prdm4 PR/SET domain 4
Hdgfl1 HDGF like 1
Pabpc1 poly(A) binding protein, cytoplasmic 1
Ppp2r2d protein phosphatase 2, regulatory subunit B, delta
Casc3 CASC3 exon junction complex subunit
Rnps1 RNA binding protein with serine rich domain 1
Eif4h eukaryotic translation initiation factor 4H
Fip1l1 factor interacting with PAPOLA and CPSF1
Pabpc2 poly(A) binding protein, cytoplasmic 2
Nudt21 nudix hydrolase 21
Ddx19a DEAD-box helicase 19A
Pabpc6 poly(A) binding protein, cytoplasmic 6
Sympk symplekin
Skiv2l Ski2 like RNA helicase
Brd2 bromodomain containing 2
Pelo pelota mRNA surveillance and ribosome rescue factor
Akirin2 akirin 2
Ncbp1 nuclear cap binding protein subunit 1
Magoh mago homolog, exon junction complex subunit
Pabpc4 poly(A) binding protein, cytoplasmic 4
Tardbp TAR DNA binding protein
Ppp2r5e protein phosphatase 2 regulatory subunit B', epsilon
Cpsf2 cleavage and polyadenylation specific factor 2
Pabpc1l2a poly(A) binding protein, cytoplasmic 1-like 2A
Rhot1 ras homolog family member T1
Papolb poly(A) polymerase beta
Acin1 apoptotic chromatin condensation inducer 1
Pinx1 PIN2/TERF1 interacting, telomerase inhibitor 1
Tcerg1 transcription elongation regulator 1
Etf1 eukaryotic translation termination factor 1
Nxf2 nuclear RNA export factor 2
Cstf2t cleavage stimulation factor subunit 2, tau variant
Clp1 cleavage factor polyribonucleotide kinase subunit 1
Dcaf12l1 DDB1 and CUL4 associated factor 12-like 1
Upf3b UPF3B, regulator of nonsense mediated mRNA decay
Srrm1 serine and arginine repetitive matrix 1
Papola poly (A) polymerase alpha
Luc7l3 LUC7-like 3 pre-mRNA splicing factor
Abce1 ATP binding cassette subfamily E member 1
Snrnp70 small nuclear ribonucleoprotein U1 subunit 70
Cstf3 cleavage stimulation factor subunit 3
Snrpb2 small nuclear ribonucleoprotein polypeptide B2
Srsf6 serine and arginine rich splicing factor 6
Pym1 PYM homolog 1, exon junction complex associated factor
Cpsf1 cleavage and polyadenylation specific factor 1
Pnn pinin, desmosome associated protein
Gspt2 G1 to S phase transition 2
Nxf7 nuclear RNA export factor 7
Smg5 SMG5 nonsense mediated mRNA decay factor
Upf1 UPF1, RNA helicase and ATPase
Wdr82 WD repeat domain 82
Srrt serrate, RNA effector molecule
Magohb mago homolog B, exon junction complex subunit
Mageb2 MAGE family member B2
Symbol Function*
CFDP1 craniofacial development protein 1
SAP18 Sin3A associated protein 18
MAGOH mago homolog, exon junction complex core component
EIF2S2 eukaryotic translation initiation factor 2 subunit beta
SNRPN small nuclear ribonucleoprotein polypeptide N
PAPOLB poly(A) polymerase beta
FUS FUS RNA binding protein
SEC11A SEC11 homolog A, signal peptidase complex subunit
ETF1 eukaryotic translation termination factor 1
TCOF1 treacle ribosome biogenesis factor 1
RBMXL3 RNA binding motif protein, X-linked like 3
CPSF4 cleavage and polyadenylation specific factor 4
RBBP6 RB binding protein 6, ubiquitin ligase
EIF4A3 eukaryotic translation initiation factor 4A3
GLE1 GLE1, RNA export mediator
NSRP1 nuclear speckle splicing regulatory protein 1
CPSF6 cleavage and polyadenylation specific factor 6
PCID2 PCI domain containing 2
MPHOSPH8 M-phase phosphoprotein 8
PCF11 PCF11 cleavage and polyadenylation factor subunit
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast)
CSTF1 cleavage stimulation factor subunit 1
PPIH peptidylprolyl isomerase H
PPP2R2A protein phosphatase 2 regulatory subunit Balpha
TAF12 TATA-box binding protein associated factor 12
SNRPC small nuclear ribonucleoprotein polypeptide C
HBS1L HBS1 like translational GTPase
PNISR PNN interacting serine and arginine rich protein
LOC422214 nuclear cap binding protein subunit 2, 20kDa
CSTF2 cleavage stimulation factor subunit 2
EPFIP1L re-mRNA 3'-end-processing factor FIP1-like
NXT2 nuclear transport factor 2 like export factor 2
NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit
FIP1L1 factor interacting with PAPOLA and CPSF1
PNN pinin, desmosome associated protein
CPSF2 cleavage and polyadenylation specific factor 2
PPP2R5C protein phosphatase 2 regulatory subunit B'gamma
CCDC173 coiled-coil domain containing 173
PPIG peptidylprolyl isomerase G
NCBP2 nuclear cap binding protein subunit 2, 20kDa
CPSF7 cleavage and polyadenylation specific factor 7
CASC3 cancer susceptibility candidate 3
DDX19 DEAD-box helicase 19
DAZAP1 DAZ associated protein 1
NUDCD1 NudC domain containing 1
NONO non-POU domain containing, octamer-binding
RPUSD2 RNA pseudouridylate synthase domain containing 2
GSPT2 G1 to S phase transition 2
ALYREF Aly/REF export factor
PRPF38A pre-mRNA processing factor 38A
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1
IMP4 IMP4 homolog, U3 small nucleolar ribonucleoprotein
PHF10 PHD finger protein 10
CSNK1G2 casein kinase 1 gamma 2
UPF3B UPF3B regulator of nonsense mediated mRNA decay
PYM1 PYM homolog 1, exon junction complex associated factor
NUDT21 nudix hydrolase 21
RBM8A RNA binding motif protein 8A
PWP2 PWP2 small subunit processome component
LOC112531447 polyadenylate-binding protein 2
Symbol Function*
rab2a RAB2A, member RAS oncogene family
ncbp2 nuclear cap binding protein subunit 2
ddx19b DEAD-box helicase 19b
wdr82 WD repeat domain 82
srsf11 serine and arginine rich splicing factor 11
safb scaffold attachment factor B
prpf6 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)
nxf1b nuclear RNA export factor 1b
cstf1 cleavage stimulation factor, 3' pre-RNA, subunit 1
hbs1l HBS1-like translational GTPase
cpsf3 cleavage and polyadenylation specific factor 3
actr6 actin related protein 6
tardbpb TAR DNA binding protein b
gspt1l G1 to S phase transition 1, like
snrpd3l small nuclear ribonucleoprotein D3 polypeptide, like
rnps1 RNA binding protein S1, serine-rich domain
cpsf6 cleavage and polyadenylation specific factor 6
ppp2r2ab protein phosphatase 2, regulatory subunit B, alpha b
ppp1cab protein phosphatase 1, catalytic subunit, alpha isozyme b
ankrd11 ankyrin repeat domain 11
rsf1b.1 remodeling and spacing factor 1b, tandem duplicate 1
mapre1b microtubule-associated protein, RP/EB family, member 1b
fbxo42 F-box protein 42
acin1a apoptotic chromatin condensation inducer 1a
ppp2r5eb protein phosphatase 2, regulatory subunit B', epsilon isoform b
ppp2r5ea protein phosphatase 2, regulatory subunit B', epsilon isoform a
tardbpa TAR DNA binding protein a
cstf2 cleavage stimulation factor, 3' pre-RNA, subunit 2
hnrnpa1a heterogeneous nuclear ribonucleoprotein A1a
pym1 PYM homolog 1, exon junction complex associated factor
sap18 Sin3A-associated protein
ssu72 SSU72 homolog, RNA polymerase II CTD phosphatase
pabpc1b poly A binding protein, cytoplasmic 1 b
ppp2cab protein phosphatase 2 catalytic subunit alpha b
ddx39b DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
upf3b UPF3B regulator of nonsense mediated mRNA decay
eif4a3 eukaryotic translation initiation factor 4A3
fus FUS RNA binding protein
msi2b musashi RNA-binding protein 2b
nudt21 nudix hydrolase 21
pelo pelota mRNA surveillance and ribosome rescue factor
eif4h eukaryotic translation initiation factor 4h
papola poly(A) polymerase alpha
ppp2r2d protein phosphatase 2, regulatory subunit B, delta
srsf9 serine and arginine rich splicing factor 9
ddx39ab DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab
rbm39a RNA binding motif protein 39a
abce1 ATP-binding cassette, sub-family E (OABP), member 1
cstf3 cleavage stimulation factor, 3' pre-RNA, subunit 3
pabpn1 poly(A) binding protein, nuclear 1
ppp2cb protein phosphatase 2, catalytic subunit, beta isozyme
ppp2r5d protein phosphatase 2, regulatory subunit B', delta
ppp2r1ba protein phosphatase 2, regulatory subunit A, beta a
srrm1 serine/arginine repetitive matrix 1
upf1 UPF1 RNA helicase and ATPase
pnn pinin, desmosome associated protein
cpsf1 cleavage and polyadenylation specific factor 1
cpsf2 cleavage and polyadenylation specific factor 2
supt4h1 SPT4 homolog, DSIF elongation factor subunit
yeats4 YEATS domain containing 4
itsn2b intersectin 2b
nup205 nucleoporin 205
bud31 BUD31 homolog
wdr33 WD repeat domain 33
ppp2r1bb protein phosphatase 2, regulatory subunit A, beta b
pcf11 PCF11 cleavage and polyadenylation factor subunit
rbm8a RNA binding motif protein 8A
si:ch73-138n13.1 si:ch73-138n13.1
smg5 SMG5 nonsense mediated mRNA decay factor
hnrnpm heterogeneous nuclear ribonucleoprotein M
ppp2r5cb protein phosphatase 2, regulatory subunit B', gamma b
kdm1a lysine (K)-specific demethylase 1a
taf15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor
alyref Aly/REF export factor
vps35 VPS35 retromer complex component
csnk1g2b casein kinase 1, gamma 2b
rnmt RNA (guanine-7-) methyltransferase
ddx19a DEAD-box helicase 19a
adad1 adenosine deaminase domain containing 1 (testis-specific)
smg7 SMG7 nonsense mediated mRNA decay factor
u2surp U2 snRNP-associated SURP domain containing
upf2 UPF2 regulator of nonsense mediated mRNA decay
sympk symplekin
pabpc1a poly(A) binding protein, cytoplasmic 1a
srp14 signal recognition particle 14
cbx3a chromobox homolog 3a (HP1 gamma homolog, Drosophila)
nxf1a nuclear RNA export factor 1a
pphln1 periphilin 1
tia1 TIA1 cytotoxic granule-associated RNA binding protein
msi2a musashi RNA-binding protein 2a
ppp1cb protein phosphatase 1, catalytic subunit, beta isozyme
magoh mago homolog, exon junction complex subunit
polr2b RNA polymerase II subunit B
arfgap1 ADP-ribosylation factor GTPase activating protein 1
smg6 SMG6 nonsense mediated mRNA decay factor
Symbol Function*
Spx Spliceosomal protein on the X
nonC no-on-and-no-off transient C
Upf1 Upf1 RNA helicase
Chrac-16 Chromatin accessibility complex 16kD protein
CkIalpha Casein kinase Ialpha
mRNA-cap mRNA-capping-enzyme
HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1
DENR Density regulated protein
ari-1 ariadne 1
CG17078 uncharacterized protein
U2af38 U2 small nuclear riboprotein auxiliary factor 38
Clp Clipper
CG3515 uncharacterized protein
Sf3b2 Splicing factor 3b subunit 2
Hel25E Helicase at 25E
chic chickadee
Hrb27C Heterogeneous nuclear ribonucleoprotein at 27C
snRNP-U1-70K small ribonucleoprotein particle U1 subunit 70K
SmE Small ribonucleoprotein particle protein SmE
pelo pelota
CG6700 uncharacterized protein
eRF3 eukaryotic translation release factor 3
Pk34A Pk34A
CG16812 uncharacterized protein
Smg5 Smg5 nonsense mediated mRNA decay factor
Rnmt RNA guanine-7 methyltransferase
Acn Acinus
Pabp2 Pabp2
Gle1 Gle1 RNA export mediator
tsu tsunagi
cbc crowded by cid
Pcf11 Pcf11 cleavage and polyadenylation factor subunit
pAbp poly(A) binding protein
Prp19 Pre-RNA processing factor 19
mago mago nashi
Nxt1 NTF2-related export protein 1
Pym Partner of Y14 and Mago
TBPH TAR DNA-binding protein-43 homolog
Upf3 Upf3
Mfap1 Microfibril-associated protein 1
HDAC1 Histone deacetylase 1
CG10576 uncharacterized protein
akirin akirin
Cpsf6 Cleavage and polyadenylation specific factor 6
Cpsf5 Cleavage and polyadenylation specific factor 5
Srrm1 Serine-arginine repetitive matrix 1
ATPsynbetaL ATP synthase, beta subunit-like
Zn72D Zinc-finger protein at 72D
Mo25 Mo25
not non-stop
eRF1 eukaryotic translation release factor 1
pzg putzig
CG14641 uncharacterized protein
lost lost
Fip1 Factor interacting with poly(A) polymerase 1
Wdr33 WD repeat domain 33
SmD2 Small ribonucleoprotein particle protein SmD2
CG7483 uncharacterized protein
RnpS1 RNA-binding protein S1
ohgt ohgata
sqd squid
Rbp4 RNA-binding protein 4
B52 B52
mor moira
Bin1 Bicoid interacting protein 1
Cbp20 cap binding protein 20
CstF64 Cleavage stimulation factor 64 kD subunit
Cpsf73 Cleavage and polyadenylation specificity factor 73
CG7907 uncharacterized protein
Pp1alpha-96A Protein phosphatase 1alpha at 96A
Smg6 Smg6
wdb widerborst
CG1646 uncharacterized protein
Cpsf100 Cleavage and polyadenylation specificity factor 100
CstF50 Cleavage stimulation factor 50 kD subunit
sbr small bristles
Ref1 RNA and export factor binding protein 1
Cbp80 cap binding protein 80
mts microtubule star
tws twins
Pp1-87B Protein phosphatase 1 at 87B
su(f) suppressor of forked
Symbol Function*
gsp-4 Serine/threonine-protein phosphatase PP1-delta
gsp-3 Serine/threonine-protein phosphatase PP1-gamma
mes-3 Polycomb protein mes-3
ncbp-1 Nuclear cap-binding protein subunit 1
goa-1 Guanine nucleotide-binding protein G(o) subunit alpha
R05D11.9 Uncharacterized protein
cfim-1 Cleavage and polyadenylation specificity factor subunit 5
tlf-1 TATA box-binding protein-like 1
lmn-1 Lamin-1
pabp-2 RRM domain-containing protein
cel-1 mRNA guanylyltransferase
sur-6 Serine/threonine-protein phosphatase 2A regulatory subunit sur-6
prp-17 WD_REPEATS_REGION domain-containing protein
mag-1 Protein mago nashi homolog
EEED8.4 Putative RNA-binding protein EEED8.4
EEED8.12 Putative RNA-binding protein EEED8.12
hel-1 Spliceosome RNA helicase DDX39B homolog
suf-1 Suf domain-containing protein
tdp-1 Tar DNA-binding protein homolog 1
pap-2 Poly(A) polymerase
F52H3.6 Serine/threonine-protein phosphatase
pap-3 Poly(A) polymerase
Y46G5A.28 Uncharacterized protein
rnp-5 RRM domain-containing protein
bra-2 MYND-type domain-containing protein
smr-1 SMN (Survival of Motor Neuron protein) Related
kin-19 Casein kinase I isoform alpha
C16C10.4 putative histone deacetylase complex subunit SAP18
rnp-4 RNA-binding protein 8A
T23F11.2 Uncharacterized protein
paa-1 putative serine/threonine-protein phosphatase PP2A regulatory subunit
ran-1 GTP-binding nuclear protein ran-1
cpf-2 RRM domain-containing protein
sgnh-1 RRM domain-containing protein
C09B9.4 Protein kinase domain-containing protein
C02B10.4 RRM domain-containing protein
smg-3 Suppressor with Morphological effect on Genitalia
ima-3 Importin subunit alpha-3
cfim-2 Cleavage Factor IM (CFIm) homolog
C04G2.9 Uncharacterized protein
let-92 Serine/threonine-protein phosphatase 2A catalytic subunit
aly-3 FoP_duplication domain-containing protein
cpsf-3 Cleavage and Polyadenylation Specificity Factor
fipp-1 Fip1 domain-containing protein
erfa-1 Eukaryotic peptide chain release factor subunit 1
cpsf-2 putative cleavage and polyadenylation specificity factor subunit 2
rbx-1 RING-box protein 1
pap-1 Poly(A) polymerase
gsp-1 Serine/threonine-protein phosphatase PP1-alpha
erfa-3 GTP_EFTU_D3 domain-containing protein;Tr-type G domain-containing protein
pqn-70 Prion-like-(Q/N-rich)-domain-bearing protein
dpy-30 Dosage compensation protein dpy-30
pnn-1 Pinin_SDK_memA domain-containing protein
hda-1 Histone deacetylase 1
pptr-1 Serine/threonine-protein phosphatase 2A regulatory subunit pptr-1
C09H5.7 Serine/threonine-protein phosphatase
T16G12.7 Serine/threonine-protein phosphatase
ZK938.1 Serine/threonine-protein phosphatase
smo-1 Small ubiquitin-related modifier
gsp-2 Serine/threonine-protein phosphatase PP1-beta
gip-2 Gamma-tubulin interacting protein 2
F38A5.2 Uncharacterized protein
ZC239.20 Uncharacterized protein
eif-3.L Eukaryotic translation initiation factor 3 subunit L
prp-19 Pre-mRNA-processing factor 19
Symbol Function*
PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1
PAPOLA poly(A) polymerase alpha
DDX5 DEAD-box helicase 5
CPSF7 cleavage and polyadenylation specific factor 7
UPF2 UPF2 regulator of nonsense mediated mRNA decay
CSTF3 cleavage stimulation factor subunit 3
UPF3B UPF3B regulator of nonsense mediated mRNA decay
MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like
WDR82 WD repeat domain 82
FIP1L1 factor interacting with PAPOLA and CPSF1
SNRPD1 small nuclear ribonucleoprotein D1 polypeptide
PPP2R2D protein phosphatase 2 regulatory subunit Bdelta
WDR33 WD repeat domain 33
CASC3 CASC3 exon junction complex subunit
PNN pinin, desmosome associated protein
EIF3H eukaryotic translation initiation factor 3 subunit H
CSTF2 cleavage stimulation factor subunit 2
SLTM SAFB like transcription modulator
CPSF1 cleavage and polyadenylation specific factor 1
RNGTT RNA guanylyltransferase and 5'-phosphatase
CSTF2T cleavage stimulation factor subunit 2 tau variant
LUC7L3 LUC7 like 3 pre-mRNA splicing factor
PCF11 PCF11 cleavage and polyadenylation factor subunit
SNRNP40 small nuclear ribonucleoprotein U5 subunit 40
CLP1 cleavage factor polyribonucleotide kinase subunit 1
LSM14A LSM14A mRNA processing body assembly factor
SUMO2 small ubiquitin like modifier 2
PABPC1 poly(A) binding protein cytoplasmic 1
CSTF1 cleavage stimulation factor subunit 1
ABI1 abl interactor 1
NUDT21 nudix hydrolase 21
HNRNPK heterogeneous nuclear ribonucleoprotein K
PARG poly(ADP-ribose) glycohydrolase
PPP1CC protein phosphatase 1 catalytic subunit gamma
PPP2CA protein phosphatase 2 catalytic subunit alpha
SMG8 SMG8 nonsense mediated mRNA decay factor
PPP2R2A protein phosphatase 2 regulatory subunit Balpha
EIF4A3 eukaryotic translation initiation factor 4A3
SRRM1 serine and arginine repetitive matrix 1
CSNK2A2 casein kinase 2 alpha 2
ACIN1 apoptotic chromatin condensation inducer 1
SRSF1 serine and arginine rich splicing factor 1
MAGOH mago homolog, exon junction complex subunit
ETF1 eukaryotic translation termination factor 1
DDX39B DExD-box helicase 39B
SF3A1 splicing factor 3a subunit 1
PABPC4 poly(A) binding protein cytoplasmic 4
DNAJA2 DnaJ heat shock protein family (Hsp40) member A2
CCNK cyclin K
UPF3A UPF3A regulator of nonsense mediated mRNA decay
CDC27 cell division cycle 27
SF1 splicing factor 1
SMG7 SMG7 nonsense mediated mRNA decay factor
PAPOLG poly(A) polymerase gamma
MAGOHB mago homolog B, exon junction complex subunit
SMPD4 sphingomyelin phosphodiesterase 4
CPSF6 cleavage and polyadenylation specific factor 6
NXF1 nuclear RNA export factor 1
PPP2R5C protein phosphatase 2 regulatory subunit B'gamma
SNRNP70 small nuclear ribonucleoprotein U1 subunit 70
UPF1 UPF1 RNA helicase and ATPase
SMG6 SMG6 nonsense mediated mRNA decay factor
NUP214 nucleoporin 214
SYMPK symplekin
TARDBP TAR DNA binding protein
PELO pelota mRNA surveillance and ribosome rescue factor
RBM8A RNA binding motif protein 8A
LOC114675500 uncharacterized LOC114675500
Symbol Function*
PPP1CB protein phosphatase 1 catalytic subunit beta
PPP1CA protein phosphatase 1 catalytic subunit alpha
TRIM28 tripartite motif containing 28
PNN pinin, desmosome associated protein
DDX39B DExD-box helicase 39B
CPSF1 cleavage and polyadenylation specific factor 1
EIF4A3 eukaryotic translation initiation factor 4A3
SYMPK symplekin
USP4 ubiquitin specific peptidase 4
UPF1 UPF1 RNA helicase and ATPase
PCF11 PCF11 cleavage and polyadenylation factor subunit
NXT1 nuclear transport factor 2 like export factor 1
TCERG1 transcription elongation regulator 1
NUDT21 nudix hydrolase 21
SRRM1 serine and arginine repetitive matrix 1
PELO pelota mRNA surveillance and ribosome rescue factor
ZNF622 zinc finger protein 622
PPP2R1B protein phosphatase 2 scaffold subunit Abeta
SSU72 SSU72 homolog, RNA polymerase II CTD phosphatase
AARS1 alanyl-tRNA synthetase 1
DDX19B DEAD-box helicase 19B
DDX19A DEAD-box helicase 19A
RNPS1 RNA binding protein with serine rich domain 1
ACIN1 apoptotic chromatin condensation inducer 1
UPF3B UPF3B regulator of nonsense mediated mRNA decay
PAPOLG poly(A) polymerase gamma
SCFD2 sec1 family domain containing 2
API5 apoptosis inhibitor 5
PPP2R5B protein phosphatase 2 regulatory subunit B'beta
NXF1 nuclear RNA export factor 1
WDR82 WD repeat domain 82
SNRPB small nuclear ribonucleoprotein polypeptides B and B1
UPF2 UPF2 regulator of nonsense mediated mRNA decay
ZBTB11 zinc finger and BTB domain containing 11
SMG5 SMG5 nonsense mediated mRNA decay factor
ALYREF Aly/REF export factor
ETF1 eukaryotic translation termination factor 1
SAP18 Sin3A associated protein 18
OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1
FIP1L1 factor interacting with PAPOLA and CPSF1
PABPN1 poly(A) binding protein nuclear 1
DAZAP1 DAZ associated protein 1
LOC100684233 cleavage and polyadenylation specificity factor subunit 5-like
CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component
RBM15B RNA binding motif protein 15B
LUC7L3 LUC7 like 3 pre-mRNA splicing factor
HSBP1 heat shock factor binding protein 1
PRPF40A pre-mRNA processing factor 40 homolog A
SNRNP70 small nuclear ribonucleoprotein U1 subunit 70
Symbol Function*
IES1 Ies1p
CFT2 cleavage polyadenylation factor subunit CFT2
YSH1 cleavage polyadenylation factor subunit YSH1
BUD6 Bud6p
TPD3 protein phosphatase 2A structural subunit TPD3
PPH22 phosphoprotein phosphatase 2A catalytic subunit PPH22
PPH21 phosphoprotein phosphatase 2A catalytic subunit PPH21
SUP35 translation termination factor GTPase eRF3
REF2 RNA-processing protein REF2
PCF11 Pcf11p
PTC4 type 2C protein phosphatase PTC4
CDC55 protein phosphatase 2A regulatory subunit CDC55
RNA15 Rna15p
PTI1 cleavage polyadenylation factor subunit PTI1
PAP1 polynucleotide adenylyltransferase PAP1
HRP1 Hrp1p
TSR3 ribosome biogenesis protein TSR3
CLP1 cleavage polyadenylation factor subunit CLP1
SGN1 Sgn1p
RNA14 cleavage polyadenylation factor subunit RNA14
STO1 Sto1p
NIP1 translation initiation factor eIF3 core subunit c
PFS2 cleavage polyadenylation factor subunit PFS2
NRD1 Nrd1 complex RNA-binding subunit
SSU72 RNA polymerase II subunit A C-terminal domain phosphatase
DOM34 ribosome dissociation factor DOM34
PPQ1 protein-serine/threonine phosphatase
CBC2 nuclear cap-binding protein subunit CBC2
VAC8 protein anchor VAC8
GAL83 Gal83p
RSP5 NEDD4 family E3 ubiquitin-protein ligase
RAD24 Rad24p
Symbol Function*
sds21 serine/threonine protein phosphatase Sds21
pcm1 P-TEFb-cap methyltransferase Pcm1
par1 protein phosphatase regulatory subunit Par1
saf1 splicing-associated factor Saf1
rpt3 putative proteasome regulatory subunit Rpt3
SPBC12C2.06 putative ATP-dependent RNA helicase Dbp5
ppb1 calcium-dependent serine/threonine protein phosphatase calcineurin catalytic subunit Ppb1
ppa2 serine/threonine protein phosphatase Ppa2
SPBC337.03 putative RNA polymerase II transcription termination factor
smi1 hypothetical protein
gle1 nucleoporin Gle1
mni1 protein mni1
rvb2 AAA family ATPase Rvb2
pla1 poly(A) polymerase Pla1
dis2 serine/threonine protein phosphatase PP1
alp5 actin-like protein Arp4
SPBP8B7.15c putative RBBP6 family ubiquitin-protein ligase E3
pabp mRNA export shuttling protein
pab1 protein phosphatase regulatory subunit Pab1
rna14 putative cleavage and polyadenylation specificity factor complex subunit Rna14
seb1 RNA-binding protein Seb1
mot2 putative CCR4-Not complex subunit Mot2
uap56 ATP-dependent RNA helicase Uap56
upf3 protein upf3
SPAC4G9.04c putative cleavage and polyadenylation specificity factor
paa1 protein phosphatase regulatory subunit Paa1
pfs2 WD repeat protein Pfs2
spo20 sec14 cytosolic factor family Sec14
Symbol Function*
RNPS1 RNA binding protein with serine rich domain 1
EFTUD2 elongation factor Tu GTP binding domain containing 2
PPP2R1B protein phosphatase 2 scaffold subunit Abeta
API5 apoptosis inhibitor 5
CPSF7 cleavage and polyadenylation specific factor 7
NCBP1 nuclear cap binding protein subunit 1
PAPOLG poly(A) polymerase gamma
ZNF384 zinc finger protein 384
PPP2R5D protein phosphatase 2 regulatory subunit B'delta
PAPOLA poly(A) polymerase alpha
NCBP2 nuclear cap binding protein subunit 2
PPP2R1A protein phosphatase 2 scaffold subunit Aalpha
DDX39B DExD-box helicase 39B
TBCA tubulin folding cofactor A
MLF2 myeloid leukemia factor 2
UPF3B UPF3B regulator of nonsense mediated mRNA decay
MARCHF5 membrane associated ring-CH-type finger 5
INTS8 integrator complex subunit 8
NXT1 nuclear transport factor 2 like export factor 1
ADSL adenylosuccinate lyase
UBE2I ubiquitin conjugating enzyme E2 I
UPF2 UPF2 regulator of nonsense mediated mRNA decay
CSTF2 cleavage stimulation factor subunit 2
ITCH itchy E3 ubiquitin protein ligase
PNN pinin, desmosome associated protein
FUS FUS RNA binding protein
EXOC2 exocyst complex component 2
CPSF3 cleavage and polyadenylation specific factor 3
PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D
CSTF3 cleavage stimulation factor subunit 3
CSTF1 cleavage stimulation factor subunit 1
HNRNPD heterogeneous nuclear ribonucleoprotein D
RNF126 ring finger protein 126
DDX39A DExD-box helicase 39A
SAFB scaffold attachment factor B
ACIN1 apoptotic chromatin condensation inducer 1
WDR33 WD repeat domain 33
SYMPK symplekin
RNMT RNA guanine-7 methyltransferase
EIF4A3 eukaryotic translation initiation factor 4A3
PABPC4 poly(A) binding protein cytoplasmic 4
CASC3 CASC3 exon junction complex subunit
LOC101095921 serine/arginine repetitive matrix protein 1-like
TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase
RNGTT RNA guanylyltransferase and 5'-phosphatase
DAZAP1 DAZ associated protein 1
DCAF1 DDB1 and CUL4 associated factor 1
SUPT16H SPT16 homolog, facilitates chromatin remodeling subunit
TARDBP TAR DNA binding protein
PPP2R3B protein phosphatase 2 regulatory subunit B''beta
CPSF2 cleavage and polyadenylation specific factor 2
SRRM1 serine and arginine repetitive matrix 1
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3
E2F4 E2F transcription factor 4
PHF20 PHD finger protein 20
PPP2R2A protein phosphatase 2 regulatory subunit Balpha
PCF11 PCF11 cleavage and polyadenylation factor subunit
ALYREF Aly/REF export factor
PPP1CC protein phosphatase 1 catalytic subunit gamma
RANBP1 RAN binding protein 1
MAGOHB mago homolog B, exon junction complex subunit
CPSF6 cleavage and polyadenylation specific factor 6
PABPN1 poly(A) binding protein nuclear 1


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