COXPRESdb: Home

last update: 2021.12.24

Target species

	Human (Hsa)
	e.g. [gene page] [gene list]

	Mouse (Mmu)
	e.g. [gene page] [gene list]

	Rat (Rno)
	e.g. [gene page] [gene list]

	Chicken (Gga)
	e.g. [gene list]

	Zebrafish (Dre)
	e.g. [gene list]

	Fly (Dme)
	e.g. [gene list]

	Nematoda (Cel)
	e.g. [gene list]

	Monkey (Mcc)
	e.g. [gene list]

	Dog (Cfa)
	e.g. [gene list]

	Budding yeast (Sce)
	e.g. [gene list]

	Fission yeast (Spo)
	e.g. [gene list]

statistics

Citation

Obayashi et al. (2019) COXPRESdb v7: a gene coexpression database for 11 animal species supported by 23 coexpression platforms for technical evaluation and evolutionary inference. Nucleic Acids Res, 47: D55-D62.

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What's new

2021.12.27: When the coexpressed gene list page is distorted, please perform a hard refresh in your browser (Ctrl+F5 in Chrome for Windows, Shift+Command+R in Chrome for Mac) or clear the cache.; COXPRESdb ver. 8.0 is released. The updated coexpression data are available for 34 platforms of 11 species. As the coexpression index, we introduced a LS (Logit Score) value, which is a monotonic transformation (negative logit) of the MR index, but more intuitive. Larger LS indicates stronger coexpression, and LS=0 indicates no coexpression. The LS value is provided as a z-score so that the range of values will be comparable even when changing calculation parameters in the future.

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Target species

Human (Hsa)

Mouse (Mmu)

Rat (Rno)

Chicken (Gga)

Zebrafish (Dre)

Fly (Dme)

Nematoda (Cel)

Monkey (Mcc)

Dog (Cfa)

Budding yeast (Sce)

Fission yeast (Spo)