KEGG 03018 RNA degradation

79  hsa genes in this database.
84  mmu genes in this database.
82  rno genes in this database.
69  gga genes in this database.
86  dre genes in this database.
58  dme genes in this database.
49  cel genes in this database.
86  mcc genes in this database.
83  cfa genes in this database.
64  sce genes in this database.
51  spo genes in this database.
79  fca genes in this database.

List of genes in hsa


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
694 , S BTG1 BTG anti-proliferation factor 1
1656 , N DDX6 DEAD-box helicase 6
2023 , M ENO1 enolase 1
2026 , Y ENO2 enolase 2
2027 , Y ENO3 enolase 3
3313 , M HSPA9 heat shock protein family A (Hsp70) member 9
3329 , M HSPD1 heat shock protein family D (Hsp60) member 1
4848 , N CNOT2 CCR4-NOT transcription complex subunit 2
4849 , N CNOT3 CCR4-NOT transcription complex subunit 3
4850 , N CNOT4 CCR4-NOT transcription complex subunit 4
5042 , N PABPC3 poly(A) binding protein cytoplasmic 3
5073 , N PARN poly(A)-specific ribonuclease
5211 , M PFKL phosphofructokinase, liver type
5213 , Y PFKM phosphofructokinase, muscle
5214 , Y PFKP phosphofructokinase, platelet
5393 , Y EXOSC9 exosome component 9
5394 , N EXOSC10 exosome component 10
6499 , Y SKIV2L Ski2 like RNA helicase
7832 , S BTG2 BTG anti-proliferation factor 2
8761 , N PABPC4 poly(A) binding protein cytoplasmic 4
9125 , S CNOT9 CCR4-NOT transcription complex subunit 9
9337 , K CNOT8 CCR4-NOT transcription complex subunit 8
9652 , Y TTC37 tetratricopeptide repeat domain 37
9924 , N PAN2 poly(A) specific ribonuclease subunit PAN2
10140 , N TOB1 transducer of ERBB2, 1
10200 , N MPHOSPH6 M-phase phosphoprotein 6
10438 , Y C1D C1D nuclear receptor corepressor
10766 , N TOB2 transducer of ERBB2, 2
10950 , S BTG3 BTG anti-proliferation factor 3
11044 , N TENT4A terminal nucleotidyltransferase 4A
11157 , Y LSM6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
11340 , Y EXOSC8 exosome component 8
22803 , N XRN2 5'-3' exoribonuclease 2
22894 , N DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
23016 , N EXOSC7 exosome component 7
23019 , Y_M CNOT1 CCR4-NOT transcription complex subunit 1
23404 , Y EXOSC2 exosome component 2
23517 , Y MTREX Mtr4 exosome RNA helicase
23644 , N EDC4 enhancer of mRNA decapping 4
23658 , Y LSM5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
25804 , Y LSM4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
25904 , Y CNOT10 CCR4-NOT transcription complex subunit 10
26986 , N PABPC1 poly(A) binding protein cytoplasmic 1
27257 , Y LSM1 LSM1 homolog, mRNA degradation associated
27258 , K LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
28960 , Y_N DCPS decapping enzyme, scavenger
29883 , Y CNOT7 CCR4-NOT transcription complex subunit 7
51010 , Y EXOSC3 exosome component 3
51013 , Y_N EXOSC1 exosome component 1
51690 , M LSM7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
51691 , Y LSM8 LSM8 homolog, U6 small nuclear RNA associated
54464 , N XRN1 5'-3' exoribonuclease 1
54512 , Y_N EXOSC4 exosome component 4
54766 , Y BTG4 BTG anti-proliferation factor 4
55802 , N DCP1A decapping mRNA 1A
56915 , P EXOSC5 exosome component 5
57472 , Y CNOT6 CCR4-NOT transcription complex subunit 6
57819 , Y LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
64282 , N TENT4B terminal nucleotidyltransferase 4B
80153 , Y_N EDC3 enhancer of mRNA decapping 3
80336 , N PABPC1L poly(A) binding protein cytoplasmic 1 like
80349 , Y WDR61 WD repeat domain 61
84186 , N ZCCHC7 zinc finger CCHC-type containing 7
87178 , M PNPT1 polyribonucleotide nucleotidyltransferase 1
115752 , M DIS3L DIS3 like exosome 3'-5' exoribonuclease
118460 , Y EXOSC6 exosome component 6
131870 , S NUDT16 nudix hydrolase 16
132430 , N PABPC4L poly(A) binding protein cytoplasmic 4 like
140886 , N PABPC5 poly(A) binding protein cytoplasmic 5
154197 , Y PNLDC1 PARN like ribonuclease domain containing exonuclease 1
167227 , N DCP2 decapping mRNA 2
170506 , N DHX36 DEAH-box helicase 36
196513 , M DCP1B decapping mRNA 1B
219988 , N PATL1 PAT1 homolog 1, processing body mRNA decay factor
246175 , Y CNOT6L CCR4-NOT transcription complex subunit 6 like
255967 , N PAN3 poly(A) specific ribonuclease subunit PAN3
340529 , N PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A
387712 , Y ENO4 enolase 4
645974 , N PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B


List of genes in mmu


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
12226 , S Btg1 BTG anti-proliferation factor 1
12227 , S Btg2 BTG anti-proliferation factor 2
12228 , S Btg3 BTG anti-proliferation factor 3
13209 , N Ddx6 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
13806 , Y Eno1 enolase 1, alpha non-neuron
13807 , Y Eno2 enolase 2, gamma neuronal
13808 , Y Eno3 enolase 3, beta muscle
15510 , M Hspd1 heat shock protein 1 (chaperonin)
15526 , M Hspa9 heat shock protein 9
18458 , N Pabpc1 poly(A) binding protein, cytoplasmic 1
18459 , N Pabpc2 poly(A) binding protein, cytoplasmic 2
18641 , Y Pfkl phosphofructokinase, liver, B-type
18642 , Y Pfkm phosphofructokinase, muscle
18983 , Y Cnot7 CCR4-NOT transcription complex, subunit 7
22057 , N Tob1 transducer of ErbB-2.1
24127 , N Xrn1 5'-3' exoribonuclease 1
24128 , Y Xrn2 5'-3' exoribonuclease 2
27756 , Y Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
27998 , P Exosc5 exosome component 5
50783 , Y Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
50911 , Y Exosc9 exosome component 9
50912 , M Exosc10 exosome component 10
53621 , N Cnot4 CCR4-NOT transcription complex, subunit 4
56057 , S Btg4 BTG anti-proliferation factor 4
56421 , Y Pfkp phosphofructokinase, platelet
57259 , N Tob2 transducer of ERBB2, 2
57316 , Y C1d C1D nuclear receptor co-repressor
58184 , S Cnot9 CCR4-NOT transcription complex, subunit 9
66094 , M Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
66317 , Y Wdr61 WD repeat domain 61
66362 , Y Exosc3 exosome component 3
66373 , Y_N Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
66446 , N Exosc7 exosome component 7
66583 , N Exosc1 exosome component 1
67207 , Y Lsm1 LSM1 homolog, mRNA degradation associated
67543 , N Pabpc6 poly(A) binding protein, cytoplasmic 6
67678 , K Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
68533 , N Mphosph6 M phase phosphoprotein 6
69125 , K Cnot8 CCR4-NOT transcription complex, subunit 8
69305 , Y Dcps decapping enzyme, scavenger
69639 , Y Exosc8 exosome component 8
70640 , N Dcp2 decapping mRNA 2
71701 , M Pnpt1 polyribonucleotide nucleotidyltransferase 1
72068 , N Cnot2 CCR4-NOT transcription complex, subunit 2
72162 , N Dhx36 DEAH (Asp-Glu-Ala-His) box polypeptide 36
72198 , Y Mtrex Mtr4 exosome RNA helicase
72544 , Y Exosc6 exosome component 6
72587 , Y Pan3 PAN3 poly(A) specific ribonuclease subunit
72662 , N Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
73532 , Y Nudt16l2 nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 2
74108 , N Parn poly(A)-specific ribonuclease (deadenylation nuclease)
75686 , Y Nudt16 nudix (nucleoside diphosphate linked moiety X)-type motif 16
75901 , N Dcp1a decapping mRNA 1A
76522 , Y Lsm8 LSM8 homolog, U6 small nuclear RNA associated
78651 , Y Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
78893 , Y Cnot10 CCR4-NOT transcription complex, subunit 10
93728 , N Pabpc5 poly(A) binding protein, cytoplasmic 5
103135 , N Pan2 PAN2 poly(A) specific ribonuclease subunit
104625 , Y Cnot6 CCR4-NOT transcription complex, subunit 6
108077 , Y Skiv2l superkiller viralicidic activity 2-like (S. cerevisiae)
109075 , Y_N Exosc4 exosome component 4
194735 , S Btg1c BTG anti-proliferation factor 1C
210106 , N Tent4a terminal nucleotidyltransferase 4A
213550 , M Dis3l DIS3 like exosome 3'-5' exoribonuclease
214627 , N Tent4b terminal nucleotidyltransferase 4B
218343 , P Ttc37 tetratricopeptide repeat domain 37
225929 , N Patl1 protein associated with topoisomerase II homolog 1 (yeast)
226265 , Y_N Eno4 enolase 4
227715 , Y_N Exosc2 exosome component 2
230721 , N Pabpc4 poly(A) binding protein, cytoplasmic 4
231464 , Y Cnot6l CCR4-NOT transcription complex, subunit 6-like
232791 , N Cnot3 CCR4-NOT transcription complex, subunit 3
234594 , Y Cnot1 CCR4-NOT transcription complex, subunit 1
234699 , N Edc4 enhancer of mRNA decapping 4
240023 , Y Pnldc1 poly(A)-specific ribonuclease (PARN)-like domain containing 1
241989 , N Pabpc4l poly(A) binding protein, cytoplasmic 4-like
245545 , N Pabpc1l2a poly(A) binding protein, cytoplasmic 1-like 2A
319618 , Y Dcp1b decapping mRNA 1B
319885 , N Zcchc7 zinc finger, CCHC domain containing 7
353190 , N Edc3 enhancer of mRNA decapping 3
381404 , N Pabpc1l poly(A) binding protein, cytoplasmic 1-like
433182 , Y Eno1b enolase 1B, retrotransposed
436199 , S Btg1b BTG anti-proliferation factor 1B
668382 , N Pabpc1l2b poly(A) binding protein, cytoplasmic 1-like 2B


List of genes in rno


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
24333 , Y Eno1 enolase 1
24334 , Y Eno2 enolase 2
25438 , Y Eno3 enolase 3
25741 , Y Pfkl phosphofructokinase, liver type
29618 , S Btg1 BTG anti-proliferation factor 1
29619 , S Btg2 BTG anti-proliferation factor 2
54230 , S Btg3 BTG anti-proliferation factor 3
60416 , Y Pfkp phosphofructokinase, platelet
63868 , M Hspd1 heat shock protein family D (Hsp60) member 1
65152 , Y Pfkm phosphofructokinase, muscle
170842 , N Tob1 transducer of ErbB-2.1
171350 , N Pabpc1 poly(A) binding protein, cytoplasmic 1
266605 , Y Dcps decapping enzyme, scavenger
287249 , Y Cnot6 CCR4-NOT transcription complex, subunit 6
289810 , Y C1d C1D nuclear receptor corepressor
290647 , Y Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
291604 , N Dcp2 decapping mRNA 2
291615 , N Pabpc2 poly(A) binding protein, cytoplasmic 2
291671 , M Hspa9 heat shock protein family A (Hsp70) member 9
291841 , Y Cnot1 CCR4-NOT transcription complex, subunit 1
292138 , Y_N Eno4 enolase 4
292295 , N Pabpc6 poly(A) binding protein, cytoplasmic 6
294260 , Y Skiv2l Ski2 like RNA helicase
294595 , P Ttc37 tetratricopeptide repeat domain 37
294975 , Y Exosc9 exosome component 9
295010 , N Pabpc4l poly(A) binding protein, cytoplasmic 4-like
295050 , S Exosc8 exosome component 8
296351 , N Pabpc1l poly(A) binding protein, cytoplasmic 1-like
296913 , Y Lsm8 LSM8 homolog, U6 small nuclear RNA associated
297455 , K Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
298086 , N Zcchc7 zinc finger CCHC-type containing 7
298510 , N Pabpc4 poly(A) binding protein, cytoplasmic 4
299805 , N Cnot2 CCR4-NOT transcription complex, subunit 2
300045 , Y_N Exosc4 exosome component 4
300944 , N Xrn1 5'-3' exoribonuclease 1
301513 , S Cnot9 CCR4-NOT transcription complex subunit 9
302405 , N Pabpc1l2a poly(A) binding protein, cytoplasmic 1-like 2A
306103 , Y Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
306222 , Y_N Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
306492 , Y Cnot7 CCR4-NOT transcription complex, subunit 7
306672 , N Tent4a terminal nucleotidyltransferase 4A
307745 , N Tent4b terminal nucleotidyltransferase 4B
307850 , M Exosc6 exosome component 6
308311 , N Cnot3 CCR4-NOT transcription complex, subunit 3
308441 , P Exosc5 exosome component 5
310461 , N Dhx36 DEAH-box helicase 36
312227 , N Cnot4 CCR4-NOT transcription complex, subunit 4
313243 , Y Exosc3 exosome component 3
313707 , Y Exosc10 exosome component 10
315159 , N Tob2 transducer of ERBB2, 2
315650 , S Btg4 BTG anti-proliferation factor 4
315708 , Y Edc3 enhancer of mRNA decapping 3
316034 , N Cnot10 CCR4-NOT transcription complex, subunit 10
316098 , N Exosc7 exosome component 7
360464 , N Parn poly(A)-specific ribonuclease
360760 , S Pan3 poly(A) specific ribonuclease subunit PAN3
360917 , Y Cnot6l CCR4-NOT transcription complex, subunit 6-like
360992 , M Pnpt1 polyribonucleotide nucleotidyltransferase 1
361109 , N Dcp1a decapping mRNA 1A
361399 , N Edc4 enhancer of mRNA decapping 4
361478 , K Pnldc1 PARN like ribonuclease domain containing exonuclease 1
361736 , N Patl1 PAT1 homolog 1, processing body mRNA decay factor
362229 , N Xrn2 5'-3' exoribonuclease 2
362829 , M Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
363064 , Y Wdr61 WD repeat domain 61
363077 , M Dis3l DIS3-like exosome 3'-5' exoribonuclease
363129 , Y Nudt16 nudix hydrolase 16
363603 , K Cnot8 CCR4-NOT transcription complex, subunit 8
364624 , Y Lsm1 LSM1 homolog, mRNA degradation associated
365668 , Y Mtrex Mtr4 exosome RNA helicase
366017 , Y Exosc2 exosome component 2
367975 , S LOC367975 similar to B-cell translocation gene 1
408200 , N Pan2 poly(A) specific ribonuclease subunit PAN2
498934 , Y Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
500305 , Y Dcp1b decapping mRNA 1B
500988 , N Ddx6 DEAD-box helicase 6
679140 , Y_N Exosc1 exosome component 1
684148 , Y Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
686999 , N Mphosph6 M phase phosphoprotein 6
688518 , N Pabpc5 poly A binding protein, cytoplasmic 5
688828 , Y LOC688828 similar to Nucleoside diphosphate-linked moiety X motif 16 (Nudix motif 16)
100360750 , Y LOC100360750 Sm protein F-like


List of genes in gga


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
374064 , Y PFKM phosphofructokinase, muscle
395225 , N TOB1 transducer of ERBB2, 1
395689 , Y ENO2 enolase 2
396017 , Y ENO1 enolase 1, (alpha)
396295 , S BTG1 BTG anti-proliferation factor 1
415294 , Y EDC3 enhancer of mRNA decapping 3
415359 , Y WDR61 WD repeat domain 61
415656 , Y_N EDC4 enhancer of mRNA decapping 4
415733 , N PAPD5 poly(A) RNA polymerase D5, non-canonical
415811 , N MPHOSPH6 M-phase phosphoprotein 6
415950 , S BTG1L protein BTG1-like
415992 , N DCP1A decapping mRNA 1A
416040 , K LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
416183 , M HSPA9 heat shock protein family A (Hsp70) member 9
416255 , K CNOT8 CCR4-NOT transcription complex subunit 8
416293 , Y CNOT6 CCR4-NOT transcription complex subunit 6
416423 , Y_N PARN poly(A)-specific ribonuclease
417182 , Y EXOSC2 exosome component 2
417765 , Y LSM8 LSM8 homolog, U6 small nuclear RNA associated
417851 , N CNOT2 CCR4-NOT transcription complex subunit 2
417936 , N CNOT4 CCR4-NOT transcription complex subunit 4
417992 , N TOB2 transducer of ERBB2, 2
418821 , Y DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
418926 , N PAN3 PAN3 poly(A) specific ribonuclease subunit
419189 , N PABPC1L poly(A) binding protein cytoplasmic 1 like
419454 , N EXOSC10 exosome component 10
419674 , N PABPC4 poly(A) binding protein cytoplasmic 4
419716 , N DCPS decapping enzyme, scavenger
419781 , Y BTG4 BTG anti-proliferation factor 4
419783 , N DDX6 DEAD-box helicase 6
419932 , S BTG2 BTG anti-proliferation factor 2
420055 , M LSM7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
420128 , Y LSM4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
420669 , Y CNOT10 CCR4-NOT transcription complex subunit 10
420704 , K EXOSC7 exosome component 7
420751 , Y_N LSM5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
421171 , S SKIV2L Ski2 like RNA helicase
421206 , M PNPT1 polyribonucleotide nucleotidyltransferase 1
421236 , N XRN2 5'-3' exoribonuclease 2
421267 , Y_N C1D C1D nuclear receptor corepressor
422466 , M LSM6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
422508 , Y CNOT6L CCR4-NOT transcription complex subunit 6 like
422733 , Y CNOT7 CCR4-NOT transcription complex subunit 7
423626 , Y EXOSC3 exosome component 3
423844 , S EXOSC1 exosome component 1
423918 , Y ENO4 enolase family member 4
424059 , M HSPD1 heat shock protein family D (Hsp60) member 1
424215 , S CNOT9 CCR4-NOT transcription complex subunit 9
424778 , N XRN1 5'-3' exoribonuclease 1
425032 , N DHX36 DEAH-box helicase 36
426566 , Y_N PATL1 PAT1 homolog 1, processing body mRNA decay factor
426775 , Y LSM1 LSM1 homolog, mRNA degradation associated
426807 , N ZCCHC7 zinc finger CCHC-type containing 7
427114 , Y TTC37 tetratricopeptide repeat domain 37
427137 , Y SKIV2L2 Ski2 like RNA helicase 2
428411 , Y PFKP phosphofructokinase, platelet
428595 , N PNLDC1 PARN like, ribonuclease domain containing 1
429172 , N PAN2 PAN2 poly(A) specific ribonuclease subunit
430997 , N PABPC1 poly(A) binding protein cytoplasmic 1
619530 , Y_N EXOSC9 exosome component 9
769850 , Y PFKL phosphofructokinase, liver type
769972 , N DCP2 decapping mRNA 2
770425 , N PAPD7 poly(A) RNA polymerase D7, non-canonical
772197 , Y DCP1B decapping mRNA 1B
100857630 , N DIS3L DIS3 like exosome 3'-5' exoribonuclease
100858397 , Y CNOT1 CCR4-NOT transcription complex subunit 1
100858560 , Y EXOSC8 exosome component 8
100858931 , Y EXOSC5 exosome component 5
107052160 , Y EXOSC6 exosome component 6


List of genes in dre


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
30079 , S btg2 B-cell translocation gene 2
57924 , Y smx5 smx5
114432 , M btg1 B-cell translocation gene 1, anti-proliferative
282676 , M hspd1 heat shock 60 protein 1
317641 , N zcchc7 zinc finger, CCHC domain containing 7
321035 , N pabpc4 poly(A) binding protein, cytoplasmic 4 (inducible form)
321940 , N xrn2 5'-3' exoribonuclease 2
323016 , Y exosc8 exosome component 8
324048 , Y cnot6a CCR4-NOT transcription complex, subunit 6a
324574 , S wu:fc33b09 wu:fc33b09
326786 , Y_N exosc6 exosome component 6
327625 , N pabpc1l poly(A) binding protein, cytoplasmic 1-like
327627 , N cnot3b CCR4-NOT transcription complex, subunit 3b
334116 , Y eno1a enolase 1a, (alpha)
360153 , N dcp1a decapping mRNA 1A
373085 , M hspa9 heat shock protein 9
378946 , N btg4 B-cell translocation gene 4
378963 , Y eno3 enolase 3, (beta, muscle)
386629 , N tob1a transducer of ERBB2, 1a
393121 , N dcp2 decapping mRNA 2
393668 , K eno1b enolase 1b, (alpha)
393669 , Y lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
393712 , N exosc4 exosome component 4
393827 , Y wdr61 WD repeat domain 61
393856 , N pabpc1b poly A binding protein, cytoplasmic 1 b
394008 , N xrn1 5'-3' exoribonuclease 1
394064 , N exosc10 exosome component 10
394144 , N cnot4b CCR4-NOT transcription complex, subunit 4b
402850 , Y dcps decapping enzyme, scavenger
402874 , K eno2 enolase 2
406245 , N tob1b transducer of ERBB2, 1b
406632 , Y_N cnot9 CCR4-NOT transcription complex subunit 9
406788 , K cnot8 CCR4-NOT transcription complex, subunit 8
406795 , Y mtrex Mtr4 exosome RNA helicase
415167 , Y lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
445157 , Y lsm1 LSM1, U6 small nuclear RNA associated
445224 , N mphosph6 M-phase phosphoprotein 6
447836 , Y pfkma phosphofructokinase, muscle a
448949 , Y_N cnot1 CCR4-NOT transcription complex, subunit 1
449540 , N cnot3a CCR4-NOT transcription complex, subunit 3a
449918 , N cnot10 CCR4-NOT transcription complex, subunit 10
449987 , Y_N zgc:103759 zgc:103759
450057 , Y exosc9 exosome component 9
474329 , N c1d C1D nuclear receptor corepressor
492479 , S btg3 B-cell translocation gene 3
492503 , S si:dkey-42i9.4 si:dkey-42i9.4
504054 , Y_N edc3 enhancer of mRNA decapping 3 homolog (S. cerevisiae)
550234 , N exosc2 exosome component 2
550247 , Y exosc7 exosome component 7
550259 , Y pfklb phosphofructokinase, liver b
553665 , Y cnot6l CCR4-NOT transcription complex, subunit 6-like
557829 , N tent4a terminal nucleotidyltransferase 4A
558487 , Y eno4 enolase 4
558857 , S exosc1 exosome component 1
559653 , Y skiv2l SKI2 homolog, superkiller viralicidic activity 2-like
560362 , N dis3l DIS3 like exosome 3'-5' exoribonuclease
560386 , N cnot6b CCR4-NOT transcription complex, subunit 6b
560944 , Y pfkpa phosphofructokinase, platelet a
561416 , Y pfkpb phosphofructokinase, platelet b
563948 , Y lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
564633 , N ddx6 DEAD (Asp-Glu-Ala-Asp) box helicase 6
565000 , S exosc3 exosome component 3
565659 , N edc4 enhancer of mRNA decapping 4
566017 , Y lsm8 LSM8 homolog, U6 small nuclear RNA associated
568001 , E_M pfkmb phosphofructokinase, muscle b
568176 , M dcp1b decapping mRNA 1B
568678 , N tent4b terminal nucleotidyltransferase 4B
569055 , N cnot4a CCR4-NOT transcription complex, subunit 4a
569072 , N dhx36 DEAH (Asp-Glu-Ala-His) box polypeptide 36
570106 , M pfkla phosphofructokinase, liver a
573047 , Y lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
606498 , N pabpc1a poly(A) binding protein, cytoplasmic 1a
751632 , N exosc5 exosome component 5
768119 , Y cnot7 CCR4-NOT transcription complex, subunit 7
791461 , N parn poly(A)-specific ribonuclease (deadenylation nuclease)
792831 , N pan2 poly(A) specific ribonuclease subunit PAN2
100003553 , Y dis3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease
100007313 , N ddx61 DEAD (Asp-Glu-Ala-Asp) box helicase 61
100007655 , M LOC100007655 protein Tob2
100009659 , N patl1 PAT1 homolog 1, processing body mRNA decay factor
100037372 , N cnot2 CCR4-NOT transcription complex, subunit 2
100126012 , N pan3 poly(A) specific ribonuclease subunit PAN3
100332172 , Y ttc37 tetratricopeptide repeat domain 37
100535720 , K lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
100538016 , N si:dkey-79d12.5 si:dkey-79d12.5
100750260 , M pnpt1 polyribonucleotide nucleotidyltransferase 1


List of genes in dme


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
31795 , N Trf4-1 Topoisomerase related function 4-1
32045 , M Hsp60A Heat shock protein 60A
32558 , Y Rrp47 Ribosomal RNA processing 47
32574 , N Tob Transducer of ERBB2
32665 , N Rrp45 Rrp45
32935 , N pcm pacman
32966 , Y Rcd-1 Required for cell differentiation 1
33351 , Y Eno Enolase
33796 , M Hsp60C Heat shock protein 60C
33964 , Y Rat1 Rat1 5'-3' exoribonuclease
34229 , K Rcd-1r Rcd-1 related
34364 , N me31B maternal expression at 31B
34416 , N Cnot4 CCR4-NOT transcription complex subunit 4
34541 , P Ge-1 Ge-1
34548 , Y Csl4 Csl4
34721 , Y Ski6 Ski6
34763 , M Hsp60D Heat shock protein 60D
34901 , Y_N CG15262 uncharacterized protein
35003 , Y LSm7 Like Sm 7
35339 , N Rhau RHAU helicase
35382 , N Mpp6 M-phase phosphoprotein 6
35501 , N Not3 CCR4-NOT transcription complex subunit 3
35893 , N PAN2 Poly(A)-binding protein-dependent poly(A) ribonuclease 2
35921 , Y CG8777 uncharacterized protein
36060 , Y Pfk Phosphofructokinase
36583 , M Hsc70-5 Heat shock protein cognate 5
36766 , Y Rrp42 Rrp42
37070 , N pAbp poly(A) binding protein
37372 , S CG9344 uncharacterized protein
37413 , Y LSm1 Like Sm 1
37731 , K Rrp4 Rrp4
37790 , N DCP1 Decapping protein 1
38229 , K CG2021 uncharacterized protein
38369 , E_M PAN3 Poly(A) specific ribonuclease subunit PAN3
38693 , Y_N CG6610 uncharacterized protein
39366 , Y_N Pop2 Pop2
39408 , Y CG10418 uncharacterized protein
39722 , N DCP2 Decapping protein 2
39957 , Y Edc3 Enhancer of decapping 3
40173 , Y Mtr3 Mtr3
40683 , Y Rga Regena
40711 , Y CG2091 uncharacterized protein
41226 , Y CG3909 uncharacterized protein
41270 , Y Rrp46 Rrp46
41552 , N Not10 CCR4-NOT transcription complex subunit 10
41798 , N Rrp6 Rrp6
42058 , Y Patr-1 Protein associated with topo II related - 1
42813 , Y tst twister
42842 , Y LSm3 Like Sm 3
42880 , Y twin twin
42900 , N Dis3 Dis3
42983 , K Trf4-2 Topoisomerase related function 4-2
43710 , M PNPase Polynucleotide phosphorylase
48572 , M Hsp60B Heat shock protein 60B
48782 , Y Mtr4 Mtr4 helicase
319033 , K Rrp40 Ribosomal RNA processing 40
3772012 , Y CG17768 uncharacterized protein
5740252 , Y_N Not1 Not1


List of genes in cel


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
172735 , N gld-4 Poly(A) RNA polymerase gld-4
172863 , N fog-3 Anti_prolifrtn domain-containing protein
172920 , N pab-1 Polyadenylate-binding protein
173517 , Y Y51H7C.7 Uncharacterized protein
173618 , N F29A7.6 Protein F29A7.6
173773 , N ntl-2 NOT2_3_5 domain-containing protein
174193 , Y lsm-4 putative U6 snRNA-associated Sm-like protein LSm4
174423 , M enol-1 Enolase
174634 , Y_N crn-5 RNase_PH domain-containing protein
174700 , Y lsm-1 U6 snRNA-associated Sm-like protein LSm1
174808 , N patr-1 Protein PAT1 homolog 1
175059 , N xrn-1 5'-3' exoribonuclease 1
175071 , N xrn-2 5'-3' exoribonuclease 2 homolog
175269 , N BE0003N10.1 Polyribonucleotide nucleotidyltransferase
175316 , M hsp-60 Chaperonin homolog Hsp-60, mitochondrial
175669 , Y ntl-9 CCR4-NOT transcription complex subunit 9
175971 , Y let-711 Not1 domain-containing protein
175974 , N panl-2 PAN (PolyA-specific riboNucLease) subunit
176012 , S exos-9 Exosome complex component RRP45
176061 , N cgh-1 ATP-dependent RNA helicase cgh-1
176391 , Y_N panl-3 PAN2-PAN3 deadenylation complex subunit PAN3
176532 , Y exos-1 ECR1_N domain-containing protein
176614 , N ntl-3 NOT2_3_5 domain-containing protein
176625 , Y ccf-1 CCR4-NOT transcription complex subunit 7
176924 , Y dcap-1 mRNA_decap_C domain-containing protein
177393 , Y lsm-8 U6 snRNA-associated Sm-like protein LSm8
177403 , K exos-2 Ribosomal RNA-processing protein 4
177580 , N ntl-4 uncharacterized protein
177824 , Y mtr-4 mRNA transport homolog 4
177875 , N dis-3 putative exosome complex exonuclease RRP44
177988 , Y_N lsm-7 Sm domain-containing protein
178017 , Y skih-2 uncharacterized protein
178184 , Y ccr-4 Endo/exonuclease/phosphatase domain-containing protein;Poly(A)-specific ribonuclease
178303 , Y lsm-3 U6 snRNA-associated Sm-like protein LSm3
178321 , N dcap-2 Nudix hydrolase domain-containing protein;mRNA-decapping enzyme 2
178873 , M hsp-6 Heat shock protein hsp-6
179335 , Y pfk-1.2 ATP-dependent 6-phosphofructokinase 2
179833 , S gut-2 U6 snRNA-associated Sm-like protein LSm2
180047 , Y_N lsm-5 U6 snRNA-associated Sm-like protein LSm5
180315 , Y dcs-1 m7GpppX diphosphatase
180369 , K exos-7 RNase_PH domain-containing protein
180583 , Y pfk-1.1 ATP-dependent 6-phosphofructokinase 1
181473 , N pab-2 Polyadenylate-binding protein
186604 , K exos-3 Ribosomal RNA-processing protein 40
187256 , Y parn-1 3'-5' exoribonuclease parn-1
190601 , Y lsm-6 Sm domain-containing protein
259488 , M exos-4.2 RNase_PH domain-containing protein
3565889 , N crn-3 HRDC domain-containing protein
24105309 , Y exos-4.1 Putative exosome complex component RRP41


List of genes in mcc


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
693292 , N CNOT3 CCR4-NOT transcription complex subunit 3
693438 , M LOC693438 heat shock 60kDa protein 1 (chaperonin)-like
693550 , Y_N LSM5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
694048 , Y_N DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
694198 , N DCP1A decapping mRNA 1A
694225 , N DCP2 decapping mRNA 2
694589 , N TENT4B terminal nucleotidyltransferase 4B
694593 , Y LOC694593 enolase 1-like
695071 , Y EXOSC8 exosome component 8
695433 , N PABPC4L poly(A) binding protein cytoplasmic 4 like
696409 , N PABPC5 poly(A) binding protein cytoplasmic 5
697981 , Y CNOT6L CCR4-NOT transcription complex subunit 6 like
698024 , M HSPD1 heat shock protein family D (Hsp60) member 1
698247 , Y TTC37 tetratricopeptide repeat domain 37
698450 , Y C1D C1D nuclear receptor corepressor
699207 , N PATL1 PAT1 homolog 1, processing body mRNA decay factor
699754 , Y LSM1 LSM1 homolog, mRNA degradation associated
700012 , Y_N EXOSC4 exosome component 4
700522 , Y ENO4 enolase 4
700934 , N XRN2 5'-3' exoribonuclease 2
701060 , K LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
701393 , N EDC4 enhancer of mRNA decapping 4
701441 , N DDX6 DEAD-box helicase 6
701978 , S CNOT9 CCR4-NOT transcription complex subunit 9
702192 , Y CNOT7 CCR4-NOT transcription complex subunit 7
702299 , K LOC702299 U6 snRNA-associated Sm-like protein LSm5
703168 , S BTG2 BTG anti-proliferation factor 2
703226 , Y LSM6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
704986 , N CNOT10 CCR4-NOT transcription complex subunit 10
705203 , P EXOSC5 exosome component 5
705847 , N PABPC1 poly(A) binding protein cytoplasmic 1
705906 , N PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B
706097 , Y_N EXOSC1 exosome component 1
706419 , Y MTREX Mtr4 exosome RNA helicase
706873 , N TOB1 transducer of ERBB2, 1
707216 , N TOB2 transducer of ERBB2, 2
707368 , Y_N EXOSC9 exosome component 9
707806 , Y PFKM phosphofructokinase, muscle
707835 , P PNLDC1 PARN like ribonuclease domain containing exonuclease 1
708011 , N CNOT4 CCR4-NOT transcription complex subunit 4
708089 , Y DCP1B decapping mRNA 1B
708112 , N DHX36 DEAH-box helicase 36
708443 , N LOC708443 polyadenylate-binding protein 1
708569 , Y LSM8 LSM8 homolog, U6 small nuclear RNA associated
708617 , N PABPC3 poly(A) binding protein cytoplasmic 3
709182 , Y EDC3 enhancer of mRNA decapping 3
709378 , Y ENO1 enolase 1
709946 , Y_N BTG4 BTG anti-proliferation factor 4
709971 , Y WDR61 WD repeat domain 61
710112 , S BTG1 BTG anti-proliferation factor 1
710238 , M DIS3L DIS3 like exosome 3'-5' exoribonuclease
710579 , Y BTG3 BTG anti-proliferation factor 3
711494 , N PAN3 poly(A) specific ribonuclease subunit PAN3
711882 , N PABPC1L poly(A) binding protein cytoplasmic 1 like
712478 , N PAN2 poly(A) specific ribonuclease subunit PAN2
712669 , Y EXOSC6 exosome component 6
712880 , Y CNOT1 CCR4-NOT transcription complex subunit 1
712984 , N PARN poly(A)-specific ribonuclease
713853 , N TENT4A terminal nucleotidyltransferase 4A
714153 , Y EXOSC10 exosome component 10
714208 , Y ENO2 enolase 2
714335 , N MPHOSPH6 M-phase phosphoprotein 6
714497 , N XRN1 5'-3' exoribonuclease 1
714506 , M HSPA9 heat shock protein family A (Hsp70) member 9
714624 , N EXOSC7 exosome component 7
714813 , K CNOT8 CCR4-NOT transcription complex subunit 8
715592 , Y LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
715960 , Y EXOSC2 exosome component 2
715987 , Y SKIV2L Ski2 like RNA helicase
716083 , N PABPC4 poly(A) binding protein cytoplasmic 4
716286 , Y CNOT6 CCR4-NOT transcription complex subunit 6
716347 , Y EXOSC3 exosome component 3
716658 , N ZCCHC7 zinc finger CCHC-type containing 7
717749 , Y_N DCPS decapping enzyme, scavenger
717914 , Y_N NUDT16 nudix hydrolase 16
717946 , Y_N LOC717946 U8 snoRNA-decapping enzyme-like
718501 , N CNOT2 CCR4-NOT transcription complex subunit 2
718973 , M PNPT1 polyribonucleotide nucleotidyltransferase 1
720192 , Y_N LSM4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
721486 , M LSM7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
721589 , M ENO3 enolase 3
722173 , Y PFKL phosphofructokinase, liver type
722330 , Y PFKP phosphofructokinase, platelet
100430850 , Y LOC100430850 ATP-dependent 6-phosphofructokinase, platelet type
106995243 , N LOC106995243 polyadenylate-binding protein 1-like 2
114675563 , N LOC114675563 polyadenylate-binding protein 1-like


List of genes in cfa


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
403849 , Y PFKM phosphofructokinase, muscle
474404 , N PAN2 poly(A) specific ribonuclease subunit PAN2
474446 , N CNOT2 CCR4-NOT transcription complex subunit 2
474697 , M HSPA9 heat shock protein family A (Hsp70) member 9
474849 , Y LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
475298 , Y LSM8 LSM8 homolog, U6 small nuclear RNA associated
475587 , Y LSM1 LSM1 homolog, mRNA degradation associated
476093 , Y_N EXOSC9 exosome component 9
476654 , N EXOSC7 exosome component 7
477100 , N XRN1 5'-3' exoribonuclease 1
477117 , N DHX36 DEAH-box helicase 36
477133 , N XRN2 5'-3' exoribonuclease 2
477238 , N PABPC1L poly(A) binding protein cytoplasmic 1 like
477300 , Y_N EXOSC8 exosome component 8
477734 , Y DCP1B decapping mRNA 1B
477787 , Y_N EXOSC1 exosome component 1
477832 , Y_N ENO4 enolase 4
478019 , Y PFKP phosphofructokinase, platelet
478131 , N TENT4B terminal nucleotidyltransferase 4B
478233 , N EXOSC10 exosome component 10
478346 , M DIS3L DIS3 like exosome 3'-5' exoribonuclease
478854 , M HSPD1 heat shock protein family D (Hsp60) member 1
479068 , Y WDR61 WD repeat domain 61
479071 , N LOC479071 probable ATP-dependent RNA helicase DDX6
479150 , P TTC37 tetratricopeptide repeat domain 37
479414 , N DDX6 DEAD-box helicase 6
479469 , Y ENO3 enolase 3
479597 , Y ENO1 enolase 1
479632 , Y MPHOSPH6 M-phase phosphoprotein 6
479839 , N PARN poly(A)-specific ribonuclease
481233 , N TOB2 transducer of ERBB2, 2
481376 , M PNPT1 polyribonucleotide nucleotidyltransferase 1
481463 , Y CNOT6 CCR4-NOT transcription complex subunit 6
481611 , N ZCCHC7 zinc finger CCHC-type containing 7
481616 , Y EXOSC3 exosome component 3
481720 , N SKIV2L Ski2 like RNA helicase
482086 , N EXOSC4 exosome component 4
482464 , N PABPC4 poly(A) binding protein cytoplasmic 4
482708 , N CNOT4 CCR4-NOT transcription complex subunit 4
482895 , Y CNOT7 CCR4-NOT transcription complex subunit 7
483825 , N PABPC4L poly(A) binding protein cytoplasmic 4 like
484065 , P PNLDC1 PARN like ribonuclease domain containing exonuclease 1
484312 , N CNOT3 CCR4-NOT transcription complex subunit 3
485491 , N DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
486024 , Y_N PAN3 poly(A) specific ribonuclease subunit PAN3
487647 , Y_N EDC3 enhancer of mRNA decapping 3
487695 , S BTG3 BTG anti-proliferation factor 3
487797 , M PFKL phosphofructokinase, liver type
487817 , Y CNOT6L CCR4-NOT transcription complex subunit 6 like
488057 , N TENT4A terminal nucleotidyltransferase 4A
488559 , S BTG2 BTG anti-proliferation factor 2
489086 , N DCP2 decapping mRNA 2
489162 , K CNOT8 CCR4-NOT transcription complex subunit 8
489713 , Y EXOSC6 exosome component 6
489751 , N EDC4 enhancer of mRNA decapping 4
492002 , N PABPC5 poly(A) binding protein cytoplasmic 5
607248 , K LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
607346 , N DCP1A decapping mRNA 1A
607950 , Y MTREX Mtr4 exosome RNA helicase
608606 , Y EXOSC2 exosome component 2
608777 , Y CNOT1 CCR4-NOT transcription complex subunit 1
609536 , N DCPS decapping enzyme, scavenger
609696 , N PATL1 PAT1 homolog 1, processing body mRNA decay factor
609922 , Y_N LSM4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
610449 , S CNOT9 CCR4-NOT transcription complex subunit 9
610721 , Y_N NUDT16 nudix hydrolase 16
611350 , Y EXOSC5 exosome component 5
611686 , Y_N LSM5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
612170 , M LSM7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
612329 , Y LSM6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
612549 , Y C1D C1D nuclear receptor corepressor
612751 , N PABPC1 poly(A) binding protein cytoplasmic 1
612778 , N CNOT10 CCR4-NOT transcription complex subunit 10
100684605 , S BTG1 BTG anti-proliferation factor 1
100687895 , Y LOC100687895 WD repeat-containing protein 61-like
100856683 , Y ENO2 enolase 2
102154080 , K LOC102154080 U6 snRNA-associated Sm-like protein LSm3
102154474 , Y LOC102154474 U6 snRNA-associated Sm-like protein LSm2
102154724 , Y_N LOC102154724 U6 snRNA-associated Sm-like protein LSm3
111089952 , Y BTG4 BTG anti-proliferation factor 4
111093384 , Y_N LOC111093384 M-phase phosphoprotein 6-like
119865916 , K LOC119865916 U6 snRNA-associated Sm-like protein LSm3
119868207 , N PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A


List of genes in sce


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
850401 , Y_N RRP43 exosome non-catalytic core subunit RRP43
850440 , N PAT1 Pat1p
850455 , P CDC39 CCR4-NOT core subunit CDC39
850516 , Y_N CAF16 putative ATP-binding cassette family ATPase CAF16
850884 , N SKG3 Skg3p
850963 , M HSP60 chaperone ATPase HSP60
850974 , N DCS1 5'-(N(7)-methyl 5'-triphosphoguanosine)-(mRNA) diphosphatase
851084 , M SSQ1 Hsp70 family ATPase SSQ1
851114 , N SKI2 SKI complex RNA helicase subunit SKI2
851159 , N LSM3 U4/U6-U5 snRNP complex subunit LSM3
851212 , N CCR4 CCR4-NOT core exoribonuclease subunit CCR4
851379 , N AIR2 TRAMP complex RNA-binding subunit
851389 , N CDC36 CCR4-NOT core subunit CDC36
851394 , N DHH1 DExD/H-box ATP-dependent RNA helicase DHH1
851447 , N RRP42 exosome non-catalytic core subunit RRP42
851874 , Y RRP45 exosome non-catalytic core subunit RRP45
851984 , Y_N LSM6 U4/U6-U5 snRNP complex subunit LSM6
852255 , N LSM2 Sm-like protein LSM2
852332 , M TCM62 Tcm62p
852659 , S SKI8 SKI complex subunit WD repeat protein SKI8
852702 , N XRN1 chromatin-binding exonuclease XRN1
852786 , N PAN2 poly(A)-specific ribonuclease
852987 , Y_N RRP46 exosome non-catalytic core subunit RRP46
853062 , N MTR3 exosome non-catalytic core subunit MTR3
853109 , N SKI6 exosome non-catalytic core subunit SKI6
853155 , Y PFK1 6-phosphofructokinase subunit alpha
853169 , Y ENO1 phosphopyruvate hydratase ENO1
853318 , N LSM1 Lsm1p
853397 , N MTR4 ATP-dependent RNA helicase MTR4
853479 , Y LSM8 U4/U6-U5 snRNP complex subunit LSM8
853503 , M SSC1 Hsp70 family ATPase SSC1
853843 , Y_N PAN3 Pan3p
854016 , Y DCP1 Dcp1p
854023 , Y RRP40 exosome non-catalytic core subunit RRP40
854034 , N PAP2 non-canonical poly(A) polymerase PAP2
854138 , N DIS3 exosome catalytic subunit DIS3
854162 , N RRP6 exosome nuclease subunit RRP6
854213 , N RAT1 ssRNA exonuclease RAT1
854243 , N SKI7 Ski7p
854575 , Y ERR1 phosphopyruvate hydratase ERR1
854731 , N AIR1 TRAMP complex RNA-binding subunit
854773 , N NOT3 CCR4-NOT core subunit NOT3
855245 , Y PFK2 6-phosphofructokinase subunit beta
855373 , Y ERR3 phosphopyruvate hydratase ERR3
855417 , N TRF5 non-canonical poly(A) polymerase TRF5
855428 , Y CAF40 CCR4-NOT core subunit CAF40
855443 , N CAF120 Caf120p
855489 , Y CSL4 exosome non-catalytic core subunit CSL4
855575 , N LSM7 Sm-like protein LSM7
855605 , N DCP2 decapping enzyme complex catalytic subunit
855758 , N MPP6 Mpp6p
855788 , N POP2 CCR4-NOT core DEDD family RNase subunit POP2
855848 , Y ERR2 phosphopyruvate hydratase ERR2
856186 , N NOT5 CCR4-NOT core subunit NOT5
856319 , N SKI3 SKI complex subunit tetratricopeptide repeat protein SKI3
856466 , Y_N RRP4 exosome non-catalytic core subunit RRP4
856481 , N LRP1 Lrp1p
856579 , Y ENO2 phosphopyruvate hydratase ENO2
856682 , M ECM10 Hsp70 family ATPase ECM10
856700 , N EDC3 Edc3p
856799 , N MOT2 CCR4-NOT core ubiquitin-protein ligase subunit MOT2
856848 , N LSM4 U6 snRNA complex subunit LSM4
856889 , K LSM5 RNA-binding protein LSM5
856912 , Y_N PAB1 polyadenylate-binding protein


List of genes in spo


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
2538778 , N not2 putative CCR4-Not complex subunit Not2
2538804 , N lsm2 putative U6 snRNP-associated core protein
2538841 , N SPCC550.03c putative Ski complex RNA helicase Ski2
2538913 , Y_N ccr4 putative CCR4-Not complex subunit Ccr4
2538964 , N lsm7 putative U6 snRNP-associated protein Lsm7
2539041 , Y caf1 CCR4-Not complex CAF1 family ribonuclease subunit Caf1
2539105 , N cti1 Cut3-interacting putative exosome subunit Cti1
2539106 , M SPCC757.08 putative exosome subunit Rrp45
2539136 , Y_N SPCC1919.05 putative Ski complex TPR repeat subunit Ski3
2539322 , K lsm8 putative U6 snRNP-associated protein Lsm8
2539351 , Y csl4 putative exosome subunit Csl4
2539660 , Y_N rrp46 putative exosome subunit Rrp46
2539782 , Y eno101 putative enolase
2539972 , Y pfk1 putative 6-phosphofructokinase
2540116 , Y SPBC16G5.10 putative exosome subunit Rrp42
2540189 , M SPBC17D1.03c putative exosome subunit Rrp43
2540212 , K lsm3 putative U6 snRNP-associated protein Lsm3
2540221 , S rec14 Ski complex subunit Rec14
2540231 , N ppk26 PAN complex subunit Ppk26
2540398 , N dis3 putative 3'-5' exoribonuclease subunit Dis3
2540412 , Y SPBC211.08c exosome complex component mtr3
2540475 , N lsm4 putative U6 snRNP-associated protein Lsm4
2540520 , Y_N lsm1 putative mRNA-decapping complex subunit lsm1
2540639 , N edc3 putative mRNA-decapping enhancer Edc3
2540723 , Y lsm5 putative U6 snRNP-associated protein Lsm5
2540778 , N SPBC19G7.10c putative topoisomerase II-associated deadenylation-dependent mRNA-decapping factor
2541216 , N ste13 ATP-dependent RNA helicase Ste13
2541340 , N nhm1 putative m7G(5')pppN diphosphatase
2541349 , N air1 zinc knuckle TRAMP complex subunit Air1
2541505 , N pabp mRNA export shuttling protein
2541639 , N mtr4 TRAMP complex ATP-dependent RNA helicase subunit Mtr4
2541684 , N ubp13 putative poly(A)-specific ribonuclease complex subunit Pan2
2541813 , N SPAC2F7.14c putative exosome subunit Rrp4
2541837 , K SPAC22A12.12c putative exosome subunit Rrp40
2541846 , Y caf16 putative CCR4-Not complex subunit Caf16
2541997 , Y lsm6 putative U6 snRNP-associated protein Lsm6
2542001 , P not1 putative CCR4-Not complex subunit Not1
2542094 , Y_N rcd1 CCR4-NOT complex subunit Rcd1
2542126 , N not3 putative CCR4-Not complex subunit Not3/5
2542173 , N SPAC17H9.02 putative TRAMP complex ATP-dependent RNA helicase
2542204 , N exo2 exonuclease II Exo2
2542214 , N SPACUNK4.11c M-phase phosphoprotein 6 family protein
2542325 , N mot2 putative CCR4-Not complex subunit Mot2
2542503 , N dcp2 mRNA-decapping complex catalytic subunit Dcp2
2542674 , N dhp1 5'-3' exoribonuclease Dhp1
2543026 , M ssc1 protein Hsp70
2543131 , M mcp60 protein Mcp60
2543451 , K rrp41 putative exosome 3'-5' phosphorolytic exoribonuclease Rrp41
2543630 , N rrp6 putative exosome 3'-5' exoribonuclease subunit Rrp6
3361181 , Y eno102 putative enolase
3361384 , N cid14 poly(A) polymerase Cid14


List of genes in fca


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
101080709 , N PABPC4L poly(A) binding protein cytoplasmic 4 like
101080754 , N CNOT3 CCR4-NOT transcription complex subunit 3
101080782 , Y CNOT7 CCR4-NOT transcription complex subunit 7
101081087 , Y EXOSC3 exosome component 3
101081430 , N MPHOSPH6 M-phase phosphoprotein 6
101081688 , N EDC4 enhancer of mRNA decapping 4
101081873 , N EXOSC7 exosome component 7
101081898 , Y DIS3L DIS3 like exosome 3'-5' exoribonuclease
101082118 , Y DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
101082205 , S BTG2 BTG anti-proliferation factor 2
101083238 , N PABPC1 poly(A) binding protein cytoplasmic 1
101083593 , N EDC3 enhancer of mRNA decapping 3
101084253 , Y CNOT6 CCR4-NOT transcription complex subunit 6
101084699 , N XRN2 5'-3' exoribonuclease 2
101084955 , Y LSM6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
101085048 , Y DCP1B decapping mRNA 1B
101085467 , Y WDR61 WD repeat domain 61
101085751 , Y_N ENO4 enolase 4
101085872 , Y LSM8 LSM8 homolog, U6 small nuclear RNA associated
101086377 , Y_N LSM4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
101086660 , Y ENO2 enolase 2
101087181 , Y EXOSC2 exosome component 2
101087437 , P EXOSC5 exosome component 5
101087708 , Y TTC37 tetratricopeptide repeat domain 37
101087712 , M LSM7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
101087975 , N DCP1A decapping mRNA 1A
101088044 , N PAN3 poly(A) specific ribonuclease subunit PAN3
101088074 , Y LSM1 LSM1 homolog, mRNA degradation associated
101088299 , Y MTREX Mtr4 exosome RNA helicase
101088543 , Y EXOSC8 exosome component 8
101088683 , M HSPD1 heat shock protein family D (Hsp60) member 1
101088836 , Y EXOSC9 exosome component 9
101088852 , Y PFKM phosphofructokinase, muscle
101088950 , Y DCPS decapping enzyme, scavenger
101089072 , M HSPA9 heat shock protein family A (Hsp70) member 9
101089432 , Y C1D C1D nuclear receptor corepressor
101089541 , N DHX36 DEAH-box helicase 36
101089665 , Y CNOT1 CCR4-NOT transcription complex subunit 1
101089792 , S BTG3 BTG anti-proliferation factor 3
101089808 , N ZCCHC7 zinc finger CCHC-type containing 7
101089931 , N PABPC1L poly(A) binding protein cytoplasmic 1 like
101090202 , N CNOT9 CCR4-NOT transcription complex subunit 9
101090251 , Y_N LSM5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
101090792 , M PFKL phosphofructokinase, liver type
101091162 , Y ENO3 enolase 3
101091649 , Y BTG4 BTG anti-proliferation factor 4
101092208 , N DDX6 DEAD-box helicase 6
101092785 , M CNOT10 CCR4-NOT transcription complex subunit 10
101093271 , N SKIV2L Ski2 like RNA helicase
101093622 , Y ENO1 enolase 1
101094336 , M PNPT1 polyribonucleotide nucleotidyltransferase 1
101094571 , N TENT4A terminal nucleotidyltransferase 4A
101094947 , M NUDT16 nudix hydrolase 16
101095147 , Y EXOSC6 exosome component 6
101095427 , N PABPC4 poly(A) binding protein cytoplasmic 4
101095951 , K CNOT8 CCR4-NOT transcription complex subunit 8
101096123 , N TENT4B terminal nucleotidyltransferase 4B
101096648 , Y CNOT6L CCR4-NOT transcription complex subunit 6 like
101096800 , N CNOT4 CCR4-NOT transcription complex subunit 4
101097072 , M LOC101097072 ATP-dependent 6-phosphofructokinase, platelet type
101097088 , N XRN1 5'-3' exoribonuclease 1
101097241 , P PNLDC1 PARN like ribonuclease domain containing exonuclease 1
101097375 , N DCP2 decapping mRNA 2
101097743 , N EXOSC10 exosome component 10
101098267 , N TOB1 transducer of ERBB2, 1
101098726 , N PAN2 poly(A) specific ribonuclease subunit PAN2
101099028 , N PABPC5 poly(A) binding protein cytoplasmic 5
101099329 , M EXOSC1 exosome component 1
101100021 , N PARN poly(A)-specific ribonuclease
101100507 , N PATL1 PAT1 homolog 1, processing body mRNA decay factor
101100650 , N CNOT2 CCR4-NOT transcription complex subunit 2
101100867 , Y_N EXOSC4 exosome component 4
101101054 , Y LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
101101627 , K LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
101101647 , S BTG1 BTG anti-proliferation factor 1
105260217 , N LOC105260217 polyadenylate-binding protein 1-like 2
105260772 , N TOB2 transducer of ERBB2, 2
111558721 , N PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B
111561278 , Y_N PFKP phosphofructokinase, platelet


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