| functional annotation |
| Function |
serine and arginine rich splicing factor 1a |
|
| GO BP |
|
GO:0000380 [list] [network] alternative mRNA splicing, via spliceosome
|
(12 genes)
|
IBA
|
 |
|
GO:0000398 [list] [network] mRNA splicing, via spliceosome
|
(168 genes)
|
IBA
|
|
|
GO:0008380 [list] [network] RNA splicing
|
(237 genes)
|
IEA
|
|
|
GO:0006397 [list] [network] mRNA processing
|
(309 genes)
|
IEA
|
|
|
| GO CC |
|
| GO MF |
|
GO:0003723 [list] [network] RNA binding
|
(934 genes)
|
IBA
IEA
|
|
|
GO:0003676 [list] [network] nucleic acid binding
|
(3107 genes)
|
IEA
|
|
|
| KEGG |
dre03040 [list] [network] Spliceosome (143 genes) |
 |
| dre05168 [list] [network] Herpes simplex virus 1 infection (204 genes) |
|
| Protein |
NP_998180.1
XP_005157471.1
XP_005157472.1
|
| BLAST |
NP_998180.1
XP_005157471.1
XP_005157472.1
|
| Orthologous |
[Ortholog page]
SRSF1 (hsa)
SRSF4 (hsa)
SRSF5 (hsa)
SRSF6 (hsa)
SRSF9 (hsa)
Srsf5 (mmu)
Srsf5 (rno)
B52 (dme)
SF2 (dme)
Srsf4 (mmu)
Srsf6 (mmu)
Srsf9 (mmu)
Srsf1 (mmu)
rsp-5 (cel)
rsp-2 (cel)
rsp-1 (cel)
rsp-3 (cel)
Srsf9 (rno)
srsf4 (dre)
srsf5a (dre)
Srsf6 (rno)
Srsf4 (rno)
srsf1b (dre)
SRSF6 (cfa)
srsf9 (dre)
srsf6a (dre)
SRSF6 (gga)
SRSF4 (gga)
SRSF5 (gga)
SRSF5A (gga)
srsf5b (dre)
SRSF9 (cfa)
SRSF4 (cfa)
SRSF5 (cfa)
srsf6b (dre)
SRSF1 (cfa)
Srsf1 (rno)
SRSF6 (mcc)
SRSF9 (mcc)
SRSF5 (mcc)
SRSF1 (mcc)
SRSF4 (mcc)
SRSF1 (gga)
NPL3 (sce)
rpl2101 (spo)
rpl2102 (spo)
SRSF9 (fca)
SRSF4 (fca)
SRSF6 (fca)
SRSF1 (fca)
SRSF5 (fca)
|
Subcellular
localization
wolf |
|
nucl 8,
cyto_nucl 5,
cyto 2
|
(predict for NP_998180.1)
|
|
nucl 8,
cyto_nucl 5,
cyto 2
|
(predict for XP_005157471.1)
|
|
nucl 8,
cyto_nucl 5,
cyto 2
|
(predict for XP_005157472.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| dre03040 |
Spliceosome |
4 |
 |
| dre05168 |
Herpes simplex virus 1 infection |
4 |
 |
| dre04110 |
Cell cycle |
2 |
 |
| dre03013 |
Nucleocytoplasmic transport |
2 |
 |
Genes directly connected with srsf1a on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 10.3 |
sumo3a |
small ubiquitin like modifier 3a |
[detail] |
406398 |
| 10.2 |
sumo3b |
small ubiquitin like modifier 3b |
[detail] |
436950 |
| 8.6 |
srsf2a |
serine and arginine rich splicing factor 2a |
[detail] |
406691 |
| 8.4 |
pabpn1 |
poly(A) binding protein, nuclear 1 |
[detail] |
406543 |
| 8.1 |
pphln1 |
periphilin 1 |
[detail] |
790935 |
| 8.1 |
naa40 |
N-alpha-acetyltransferase 40, NatD catalytic subunit |
[detail] |
550325 |
| 6.9 |
ptbp2a |
polypyrimidine tract binding protein 2a |
[detail] |
541437 |
|
Coexpressed
gene list |
[Coexpressed gene list for srsf1a]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
| Tissue specificity* |
|
srsf1a Gene
