| functional annotation |
| Function |
serine and arginine rich splicing factor 9 |
|
| GO BP |
|
GO:0000380 [list] [network] alternative mRNA splicing, via spliceosome
|
(12 genes)
|
IBA
|
 |
|
GO:0000398 [list] [network] mRNA splicing, via spliceosome
|
(168 genes)
|
IBA
|
|
|
| GO CC |
|
| GO MF |
|
GO:0003723 [list] [network] RNA binding
|
(934 genes)
|
IBA
IEA
|
|
|
GO:0003676 [list] [network] nucleic acid binding
|
(3107 genes)
|
IEA
|
|
|
| KEGG |
dre03040 [list] [network] Spliceosome (143 genes) |
 |
| dre05168 [list] [network] Herpes simplex virus 1 infection (204 genes) |
|
| Protein |
NP_001299828.1
NP_998064.2
|
| BLAST |
NP_001299828.1
NP_998064.2
|
| Orthologous |
[Ortholog page]
SRSF1 (hsa)
SRSF4 (hsa)
SRSF5 (hsa)
SRSF6 (hsa)
SRSF9 (hsa)
Srsf5 (mmu)
Srsf5 (rno)
B52 (dme)
SF2 (dme)
Srsf4 (mmu)
Srsf6 (mmu)
Srsf9 (mmu)
Srsf1 (mmu)
rsp-5 (cel)
rsp-2 (cel)
rsp-1 (cel)
rsp-3 (cel)
Srsf9 (rno)
srsf4 (dre)
srsf5a (dre)
Srsf6 (rno)
Srsf4 (rno)
srsf1b (dre)
SRSF6 (cfa)
srsf1a (dre)
srsf6a (dre)
SRSF6 (gga)
SRSF4 (gga)
SRSF5 (gga)
SRSF5A (gga)
srsf5b (dre)
SRSF9 (cfa)
SRSF4 (cfa)
SRSF5 (cfa)
srsf6b (dre)
SRSF1 (cfa)
Srsf1 (rno)
SRSF6 (mcc)
SRSF9 (mcc)
SRSF5 (mcc)
SRSF1 (mcc)
SRSF4 (mcc)
SRSF1 (gga)
NPL3 (sce)
rpl2101 (spo)
rpl2102 (spo)
SRSF9 (fca)
SRSF4 (fca)
SRSF6 (fca)
SRSF1 (fca)
SRSF5 (fca)
|
Subcellular
localization
wolf |
|
nucl 5,
cyto_nucl 5,
cyto 2,
extr 2
|
(predict for NP_001299828.1)
|
|
nucl 5,
cyto_nucl 5,
cyto 2,
extr 2
|
(predict for NP_998064.2)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| dre03015 |
mRNA surveillance pathway |
2 |
 |
| dre03040 |
Spliceosome |
2 |
 |
Genes directly connected with srsf9 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 9.8 |
h3f3d |
H3 histone, family 3D |
[detail] |
394076 |
| 9.6 |
cstf2 |
cleavage stimulation factor, 3' pre-RNA, subunit 2 |
[detail] |
386806 |
| 9.4 |
smarce1 |
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 |
[detail] |
322248 |
| 8.6 |
u2af1 |
U2 small nuclear RNA auxiliary factor 1 |
[detail] |
192328 |
| 8.4 |
rbbp5 |
retinoblastoma binding protein 5 |
[detail] |
393215 |
| 8.0 |
drap1 |
DR1-associated protein 1 (negative cofactor 2 alpha) |
[detail] |
321681 |
| 7.9 |
cpsf6 |
cleavage and polyadenylation specific factor 6 |
[detail] |
327069 |
| 7.8 |
nfyc |
nuclear transcription factor Y, gamma |
[detail] |
323445 |
| 7.8 |
hnrnpr |
heterogeneous nuclear ribonucleoprotein R |
[detail] |
406735 |
| 7.8 |
kmt5aa |
lysine methyltransferase 5Aa |
[detail] |
751629 |
| 7.7 |
ncoa5 |
nuclear receptor coactivator 5 |
[detail] |
447849 |
| 7.7 |
rap1aa |
RAP1A, member of RAS oncogene family a |
[detail] |
415242 |
| 7.4 |
rad21a |
RAD21 cohesin complex component a |
[detail] |
322275 |
| 6.4 |
hdac8 |
histone deacetylase 8 |
[detail] |
406740 |
| 6.0 |
strap |
serine/threonine kinase receptor associated protein |
[detail] |
393274 |
| 5.7 |
pgrmc2 |
progesterone receptor membrane component 2 |
[detail] |
406378 |
|
Coexpressed
gene list |
[Coexpressed gene list for srsf9]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
| Tissue specificity* |
|
srsf9 Gene
