[←][→] dre  ptbp2a Gene
functional annotation
Function   polypyrimidine tract binding protein 2a  
GO BP
GO:0043484 [list] [network] regulation of RNA splicing  (105 genes)  IBA  
GO:0008380 [list] [network] RNA splicing  (237 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (309 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4679 genes)  IBA IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (235 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (934 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3107 genes)  IEA  
KEGG
Protein NP_001315358.1  XP_017209318.1  XP_017209320.1 
BLAST NP_001315358.1  XP_017209318.1  XP_017209320.1 
Orthologous [Ortholog page] PTBP1 (hsa)  PTBP3 (hsa)  Ptbp1 (mmu)  Ptbp1 (rno)  heph (dme)  Ptbp2 (mmu)  PTBP2 (hsa)  Ptbp3 (rno)  ptb-1 (cel)  Ptbp3 (mmu)  Ptbp2 (rno)  ptbp1b (dre)  ptbp1a (dre)  PTBP1 (gga)  PTBP2 (gga)  PTBP3 (cfa)  PTBP1 (cfa)  PTBP2 (cfa)  ptbp2b (dre)  PTBP1 (mcc)  PTBP2 (mcc)  PTBP3 (mcc)  ptbp3 (dre)  PTBP2 (fca)  PTBP1 (fca)  PTBP3 (fca) 
Subcellular
localization
wolf
nucl 6,  cyto_nucl 5,  cyto 3  (predict for NP_001315358.1)
nucl 5,  cyto_nucl 5,  cyto 4  (predict for XP_017209318.1)
cyto 6,  cyto_nucl 5,  nucl 3  (predict for XP_017209320.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
dre03040 Spliceosome 3
dre05168 Herpes simplex virus 1 infection 2
dre03013 Nucleocytoplasmic transport 2
Genes directly connected with ptbp2a on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 srsf1a serine and arginine rich splicing factor 1a [detail] 406288
6.0 celf1 cugbp, Elav-like family member 1 [detail] 58137
5.9 hnrnpk heterogeneous nuclear ribonucleoprotein K [detail] 406267
5.7 rnf220a ring finger protein 220a [detail] 561654
Coexpressed
gene list		 [Coexpressed gene list for ptbp2a]
Gene expression
All samples [Expression pattern for all samples]
Tissue specificity*
Link to other DBs
Entrez Gene ID 541437      
Refseq ID (protein) NP_001315358.1 
XP_017209318.1 
XP_017209320.1 


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