[←][→] spo  ckn1 Gene
functional annotation
Function   DNA repair ERCC8 family protein ckn1  
GO BP
GO:0045739 [list] [network] positive regulation of DNA repair  (5 genes)  IBA  
GO:0006283 [list] [network] transcription-coupled nucleotide-excision repair  (7 genes)  IBA IMP  
GO:0000209 [list] [network] protein polyubiquitination  (30 genes)  IBA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (158 genes)  IBA  
GO CC
GO:0031464 [list] [network] Cul4A-RING E3 ubiquitin ligase complex  (1 genes)  IBA  
GO:0070912 [list] [network] Ddb1-Ckn1 complex  (2 genes)  IDA  
GO:0000109 [list] [network] nucleotide-excision repair complex  (16 genes)  IBA  
GO:0005829 [list] [network] cytosol  (2316 genes)  HDA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (89 genes)  IBA  
KEGG spo03420 [list] [network] Nucleotide excision repair (42 genes)
spo04120 [list] [network] Ubiquitin mediated proteolysis (56 genes)
Protein NP_595307.1 
BLAST NP_595307.1 
Orthologous [Ortholog page] TPP2 (hsa)  Tpp2 (mmu)  TppII (dme)  Tpp2 (rno)  tpp-2 (cel)  TPP2 (gga)  TPP2 (mcc)  tpp2 (dre)  TPP2 (cfa)  TPP2 (fca) 
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  mito_nucl 3,  cyto 3,  cyto_mito 2  (predict for NP_595307.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
spo00330 Arginine and proline metabolism 2
spo00360 Phenylalanine metabolism 2
spo03420 Nucleotide excision repair 2
Genes directly connected with ckn1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
3.8 SPNCRNA.979 [detail] 14218204
3.7 SPCC550.08 putative N-acetyltransferase [detail] 2539440
3.7 ago1 argonaute [detail] 2539403
3.6 SPCC777.02 putative transcription factor [detail] 2538869
3.1 SPBC2A9.03 WD repeat-containing protein [detail] 2540276
Coexpressed
gene list		 [Coexpressed gene list for ckn1]
Gene expression
All samples [Expression pattern for all samples]
Tissue specificity*
Link to other DBs
Entrez Gene ID 2540861      
Refseq ID (protein) NP_595307.1 


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