KEGG 03420 Nucleotide excision repair

47  hsa genes in this database.
43  mmu genes in this database.
45  rno genes in this database.
38  gga genes in this database.
44  dre genes in this database.
39  dme genes in this database.
37  cel genes in this database.
44  mcc genes in this database.
44  cfa genes in this database.
37  sce genes in this database.
42  spo genes in this database.
43  fca genes in this database.

List of genes in hsa


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
902 , Y CCNH cyclin H
1022 , Y CDK7 cyclin dependent kinase 7
1069 , N CETN2 centrin 2
1161 , N ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit
1642 , Y DDB1 damage specific DNA binding protein 1
1643 , N DDB2 damage specific DNA binding protein 2
2067 , N ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit
2068 , N ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit
2071 , N ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit
2072 , Y ERCC4 ERCC excision repair 4, endonuclease catalytic subunit
2073 , N ERCC5 ERCC excision repair 5, endonuclease
2074 , N ERCC6 ERCC excision repair 6, chromatin remodeling factor
2965 , N GTF2H1 general transcription factor IIH subunit 1
2966 , N GTF2H2 general transcription factor IIH subunit 2
2967 , N GTF2H3 general transcription factor IIH subunit 3
2968 , M GTF2H4 general transcription factor IIH subunit 4
3978 , N LIG1 DNA ligase 1
4331 , N MNAT1 MNAT1 component of CDK activating kinase
5111 , Y PCNA proliferating cell nuclear antigen
5424 , N POLD1 DNA polymerase delta 1, catalytic subunit
5425 , M POLD2 DNA polymerase delta 2, accessory subunit
5426 , N POLE DNA polymerase epsilon, catalytic subunit
5427 , M POLE2 DNA polymerase epsilon 2, accessory subunit
5886 , M RAD23A RAD23 homolog A, nucleotide excision repair protein
5887 , Y RAD23B RAD23 homolog B, nucleotide excision repair protein
5981 , N RFC1 replication factor C subunit 1
5982 , Y RFC2 replication factor C subunit 2
5983 , Y RFC3 replication factor C subunit 3
5984 , Y RFC4 replication factor C subunit 4
5985 , K RFC5 replication factor C subunit 5
6117 , M RPA1 replication protein A1
6118 , Y RPA2 replication protein A2
6119 , K RPA3 replication protein A3
7507 , N XPA XPA, DNA damage recognition and repair factor
7508 , P XPC XPC complex subunit, DNA damage recognition and repair factor
8450 , Y CUL4B cullin 4B
8451 , Y CUL4A cullin 4A
9978 , S RBX1 ring-box 1
10714 , N POLD3 DNA polymerase delta 3, accessory subunit
29935 , Y_N RPA4 replication protein A4
54107 , N POLE3 DNA polymerase epsilon 3, accessory subunit
56655 , Y POLE4 DNA polymerase epsilon 4, accessory subunit
57804 , N POLD4 DNA polymerase delta 4, accessory subunit
404672 , Y GTF2H5 general transcription factor IIH subunit 5
728340 , N GTF2H2C GTF2H2 family member C
730394 , N GTF2H2C_2 GTF2H2 family member C, copy 2
100533467 , N BIVM-ERCC5 BIVM-ERCC5 readthrough


List of genes in mmu


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
12572 , Y Cdk7 cyclin-dependent kinase 7
13194 , Y Ddb1 damage specific DNA binding protein 1
13870 , N Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1
13871 , N Ercc2 excision repair cross-complementing rodent repair deficiency, complementation group 2
13872 , N Ercc3 excision repair cross-complementing rodent repair deficiency, complementation group 3
14884 , Y Gtf2h1 general transcription factor II H, polypeptide 1
14885 , N Gtf2h4 general transcription factor II H, polypeptide 4
16881 , N Lig1 ligase I, DNA, ATP-dependent
17420 , N Mnat1 menage a trois 1
18538 , Y Pcna proliferating cell nuclear antigen
18971 , N Pold1 polymerase (DNA directed), delta 1, catalytic subunit
18972 , M Pold2 polymerase (DNA directed), delta 2, regulatory subunit
18973 , Y_N Pole polymerase (DNA directed), epsilon
18974 , M Pole2 polymerase (DNA directed), epsilon 2 (p59 subunit)
19358 , M Rad23a RAD23 homolog A, nucleotide excision repair protein
19359 , Y Rad23b RAD23 homolog B, nucleotide excision repair protein
19687 , N Rfc1 replication factor C (activator 1) 1
19718 , Y Rfc2 replication factor C (activator 1) 2
19891 , Y_N Rpa2 replication protein A2
22590 , N Xpa xeroderma pigmentosum, complementation group A
22591 , N Xpc xeroderma pigmentosum, complementation group C
22592 , N Ercc5 excision repair cross-complementing rodent repair deficiency, complementation group 5
23894 , N Gtf2h2 general transcription factor II H, polypeptide 2
26370 , N Cetn2 centrin 2
50505 , N Ercc4 excision repair cross-complementing rodent repair deficiency, complementation group 4
56438 , S Rbx1 ring-box 1
59001 , Y Pole3 polymerase (DNA directed), epsilon 3 (p17 subunit)
66467 , Y Gtf2h5 general transcription factor IIH, polypeptide 5
66671 , N Ccnh cyclin H
66979 , Y Pole4 polymerase (DNA-directed), epsilon 4 (p12 subunit)
67967 , N Pold3 polymerase (DNA-directed), delta 3, accessory subunit
68240 , Y Rpa3 replication protein A3
68275 , Y Rpa1 replication protein A1
69263 , Y Rfc3 replication factor C (activator 1) 3
69745 , N Pold4 polymerase (DNA-directed), delta 4
71991 , N Ercc8 excision repaiross-complementing rodent repair deficiency, complementation group 8
72151 , Y Rfc5 replication factor C (activator 1) 5
72584 , N Cul4b cullin 4B
99375 , Y Cul4a cullin 4A
106344 , Y Rfc4 replication factor C (activator 1) 4
107986 , N Ddb2 damage specific DNA binding protein 2
209357 , Y Gtf2h3 general transcription factor IIH, polypeptide 3
319955 , N Ercc6 excision repair cross-complementing rodent repair deficiency, complementation group 6


List of genes in rno


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
25737 , Y_N Pcna proliferating cell nuclear antigen
59102 , Y Rpa2 replication protein A2
59294 , N Pold1 DNA polymerase delta 1, catalytic subunit
64470 , Y Ddb1 damage-specific DNA binding protein 1
81513 , N Lig1 DNA ligase 1
84389 , N Ccnh cyclin H
84593 , N Cetn2 centrin 2
89809 , N Rfc1 replication factor C subunit 1
116468 , Y Rfc2 replication factor C subunit 2
171150 , Y Cdk7 cyclin-dependent kinase 7
266713 , N Mnat1 MNAT1 component of CDK activating kinase
287524 , Y Rpa1 replication protein A1
288003 , Y Rfc4 replication factor C subunit 4
288414 , Y Rfc3 replication factor C subunit 3
288651 , Y Gtf2h3 general transcription factor IIH subunit 3
289758 , M Pold2 DNA polymerase delta 2, accessory subunit
291703 , N Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit
292673 , N Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit
293144 , N Pold3 DNA polymerase delta 3, accessory subunit
294236 , N Gtf2h4 general transcription factor 2H subunit 4
294693 , N Gtf2h2 general transcription factor IIH subunit 2
296883 , Y Rpa3 replication protein A3
298012 , Y Rad23b RAD23 homolog B, nucleotide excision repair protein
298074 , N Xpa XPA, DNA damage recognition and repair factor
298098 , Y Pole3 DNA polymerase epsilon 3, accessory subunit
299112 , M Pole2 DNA polymerase epsilon 2, accessory subunit
300084 , S Rbx1 ring-box 1
301382 , N Ercc5 ERCC excision repair 5, endonuclease
302502 , N Cul4b cullin 4B
304528 , Y Rfc5 replication factor C subunit 5
304573 , Y_N Pole DNA polymerase epsilon, catalytic subunit
304719 , N Ercc4 ERCC excision repair 4, endonuclease catalytic subunit
306274 , N Ercc6 ERCC excision repair 6, chromatin remodeling factor
308415 , N Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit
310071 , N Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit
312560 , N Xpc XPC complex subunit, DNA damage recognition and repair factor
361181 , Y Cul4a cullin 4A
361381 , M Rad23a RAD23 homolog A, nucleotide excision repair protein
361580 , N Gtf2h1 general transcription factor IIH subunit 1
361698 , N Pold4 DNA polymerase delta 4, accessory subunit
362385 , Y Pole4 DNA polymerase epsilon 4, accessory subunit
502227 , Y Gtf2h5 general transcription factor IIH subunit 5
100362121 , N Ddb2 damage specific DNA binding protein 2
100362333 , Y LOC100362333 DNA-directed DNA polymerase epsilon 3
103693257 , N Ercc4l1 excision repair cross-complementing rodent repair deficiency, complementation group 4-like 1


List of genes in gga


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
373984 , Y_N PCNA proliferating cell nuclear antigen
374050 , Y DDB1 damage specific DNA binding protein 1
395659 , N XPA XPA, DNA damage recognition and repair factor
396542 , Y RFC2 replication factor C subunit 2
416039 , X XPC XPC complex subunit, DNA damage recognition and repair factor
416420 , Y ERCC4 ERCC excision repair 4, endonuclease catalytic subunit
416997 , Y POLE DNA polymerase epsilon, catalytic subunit
417275 , Y POLE3 DNA polymerase epsilon 3, accessory subunit
417563 , N RPA1 replication protein A1
418001 , S RBX1 ring-box 1
418744 , Y CUL4A cullin 4A
418907 , Y RFC3 replication factor C subunit 3
419053 , N POLD3 DNA polymerase delta 3, accessory subunit
419566 , Y RPA2 replication protein A2
420578 , Y RPA3 replication protein A3
422303 , N CETN1 centrin 1
422364 , N CUL4B cullin 4B
422788 , N RFC1 replication factor C subunit 1
423081 , N GTF2H1 general transcription factor IIH subunit 1
423185 , Y DDB2 damage specific DNA binding protein 2
423521 , N MNAT1 MNAT1, CDK activating kinase assembly factor
423567 , Y POLE2 DNA polymerase epsilon 2, accessory subunit
423785 , N ERCC6 ERCC excision repair 6, chromatin remodeling factor
424226 , N ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit
424958 , Y RFC4 replication factor C subunit 4
427153 , N ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit
427328 , M CCNH cyclin H
428019 , N ERCC5 ERCC excision repair 5, endonuclease
430516 , N LIG1 DNA ligase 1
431623 , M RAD23B RAD23 homolog B, nucleotide excision repair protein
769754 , Y GTF2H5 general transcription factor IIH subunit 5
771294 , Y CDK7 cyclin dependent kinase 7
771837 , Y GTF2H3 general transcription factor IIH subunit 3
100858972 , N GTF2H2 general transcription factor IIH subunit 2
100859241 , M RAD23A RAD23 homolog A, nucleotide excision repair protein
100859719 , K RFC5 replication factor C subunit 5
107055326 , Y POLE4 DNA polymerase epsilon 4, accessory subunit
107057377 , N POLD2 DNA polymerase delta 2, accessory subunit


List of genes in dre


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
30678 , Y_N pcna proliferating cell nuclear antigen
65226 , Y rpa2 replication protein A2
192320 , M pole2 polymerase (DNA directed), epsilon 2
259256 , Y rfc3 replication factor C (activator 1) 3
323239 , N gtf2h2 general transcription factor IIH, polypeptide 2
324323 , N ercc3 excision repair cross-complementation group 3
327322 , N ercc4 excision repair cross-complementation group 4
327491 , Y rpa1 replication protein A1
334839 , N gtf2h4 general transcription factor IIH, polypeptide 4
393196 , M rpa3 replication protein A3
393443 , N xpa xeroderma pigmentosum, complementation group A
393536 , N rad23b RAD23 homolog B, nucleotide excision repair protein
393599 , Y ddb1 damage-specific DNA binding protein 1
393774 , Y pole3 polymerase (DNA directed), epsilon 3 (p17 subunit)
393900 , N ercc2 excision repair cross-complementation group 2
394002 , Y cul4a cullin 4A
405897 , Y cdk7 cyclin-dependent kinase 7
406435 , Y rfc4 replication factor C (activator 1) 4
436837 , S gtf2h3 general transcription factor IIH, polypeptide 3
445284 , Y rad23aa RAD23 homolog A, nucleotide excision repair protein a
445385 , Y rfc5 replication factor C (activator 1) 5
447857 , N gtf2h1 general transcription factor IIH, polypeptide 1
449811 , N ercc8 excision repair cross-complementation group 8
449846 , S rbx1 ring-box 1, E3 ubiquitin protein ligase
450080 , N mnat1 MNAT1 component of CDK activating kinase
503748 , Y rfc2 replication factor C (activator 1) 2
541325 , Y ccnh cyclin H
541386 , N xpc xeroderma pigmentosum, complementation group C
541502 , N ercc5 excision repair cross-complementation group 5
553405 , Y pole polymerase (DNA directed), epsilon
553610 , Y pole4 polymerase (DNA-directed), epsilon 4, accessory subunit
556456 , N pold1 polymerase (DNA directed), delta 1, catalytic subunit
556995 , P lig1 ligase I, DNA, ATP-dependent
560313 , Y cul4b cullin 4B
560477 , N ercc6 excision repair cross-complementation group 6
562839 , Y rad23ab RAD23 homolog A, nucleotide excision repair protein b
571834 , Y pold4 DNA polymerase delta 4, accessory subunit
692256 , N pold3 polymerase (DNA-directed), delta 3, accessory subunit
751713 , Y gtf2h5 general transcription factor IIH, polypeptide 5
796456 , N pold2 polymerase (DNA directed), delta 2, regulatory subunit
100001425 , N ercc1 excision repair cross-complementation group 1
100004133 , N ddb2 damage-specific DNA binding protein 2
100006257 , N cetn2 centrin, EF-hand protein, 2
100037336 , N rfc1 replication factor C (activator 1) 1


List of genes in dme


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
31014 , Y Roc1a Regulator of cullins 1a
31357 , N Xpac Xeroderma pigmentosum group A-like
31373 , Y mei-9 meiotic 9
31441 , Y Cdk7 Cyclin-dependent kinase 7
32113 , Y RPA3 Replication protein A3
32763 , Y_N CG8142 uncharacterized protein
33294 , Y Tfb4 Transcription factor B4
34423 , Y RfC3 Replication factor C subunit 3
34550 , Y RfC38 Replication factor C 38kD subunit
34892 , N Pol32 Pol32 polymerase delta subunit
35257 , N PCNA2 Proliferating cell nuclear antigen 2
35364 , Y RPA2 Replication protein A2
35780 , Y_N Cul4 Cullin 4
36130 , N Mat1 Menage a trois 1
36598 , N Tfb1 Transcription factor B1
36654 , Y_N Ercc1 Ercc1
36697 , N Xpc Xeroderma pigmentosum, complementation group C
37290 , Y_N PCNA Proliferating cell nuclear antigen
37414 , N Xpd Xeroderma pigmentosum D
37560 , P Mes4 Mesoderm-expressed 4
37791 , N DNAlig1 DNA ligase 1
38228 , N Pol31 Pol31 polymerase delta subunit
38492 , Y RfC4 Replication factor C subunit 4
38661 , Y DNApol-epsilon58 DNA polymerase epsilon 58kD subunit
39202 , N hay haywire
39688 , N mrn marionette
39746 , N DNApol-delta DNA polymerase delta
40429 , Y CycH Cyclin H
40509 , N Ssl1 Suppressor of stem-loop mutation
40607 , N Gnf1 Germ line transcription factor 1
40972 , N RpA-70 Replication Protein A 70
41611 , P pic piccolo
42758 , Y_N DNApol-epsilon255 DNA polymerase epsilon 255kD subunit
42855 , Y_N CG10694 uncharacterized protein
43785 , N Rad23 Rad23
53445 , S Roc1b Regulator of cullins 1b
3772069 , N mus201 mutagen-sensitive 201
3772329 , S Chrac-14 Chromatin accessibility complex 14kD protein
7354403 , Y Tfb5 Transcription factor B5


List of genes in cel


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
171784 , Y cdk-7 Cyclin-dependent kinase 7
172092 , Y rpa-2 RPA_C domain-containing protein
172867 , Y ercc-1 ERCC (DNA excision repair protein) homolog
173368 , P pole-1 DNA polymerase epsilon catalytic subunit
173602 , N mnat-1 CDK-activating kinase assembly factor MAT1
174198 , M cul-4 Cullin-4
174238 , Y rpa-1 putative replication factor A 73 kDa subunit
174785 , Y_M rad-23 UV excision repair protein RAD23
174793 , N xpf-1 ERCC4 domain-containing protein
175152 , N pole-4 CBFD_NFYB_HMF domain-containing protein
175190 , N xpd-1 General transcription and DNA repair factor IIH helicase subunit XPD
175921 , S T26A5.8 CBFD_NFYB_HMF domain-containing protein
175976 , Y rfc-4 Replication factor C subunit 4
176131 , Y F44B9.8 putative replication factor C subunit 5
176421 , N gtf-2H2C General transcription factor IIH subunit 2
176425 , N gtf-2H3 General Transcription Factor homolog
176584 , N xpb-1 General transcription and DNA repair factor IIH helicase subunit XPB
176838 , Y gtf-2H1 General Transcription Factor homolog
176946 , Y rfc-2 AAA domain-containing protein
177002 , N xpc-1 XPC (Xeroderma Pigmentosum group C) DNA repair gene homolog
177161 , Y pcn-1 Proliferating cell nuclear antigen
177673 , Y_N pole-2 putative DNA polymerase epsilon subunit 2
178077 , Y F12F6.7 putative DNA polymerase delta small subunit
178156 , Y ddb-1 DNA damage-binding protein 1
178259 , Y rfc-3 RFC (DNA replication factor) family
178431 , Y gft-2H4 General transcription factor IIH subunit 4
179358 , S rbx-1 RING-box protein 1
179502 , N lig-1 DNA ligase 1
179652 , N F10C2.4 DNA polymerase delta catalytic subunit
179688 , N R04F11.3 DNA polymerase delta subunit 3
179967 , N rfc-1 Replication factor C subunit 1
181674 , N csb-1 uncharacterized protein
186441 , N xpg-1 XPG (Xeroderma Pigmentosum group G) DNA repair gene homolog
186576 , M rpa-4 RPA_C domain-containing protein
187120 , Y xpa-1 XPA_C domain-containing protein
190078 , Y cyh-1 CYclin H
190298 , Y gtf-2H5 General Transcription Factor homolog


List of genes in mcc


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
574267 , N ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit
693362 , N ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit
693376 , N CETN2 centrin 2
693548 , Y RFC2 replication factor C subunit 2
693601 , N POLD3 DNA polymerase delta 3, accessory subunit
694166 , Y RFC5 replication factor C subunit 5
694224 , N CCNH cyclin H
694253 , Y DDB1 damage specific DNA binding protein 1
694564 , N GTF2H1 general transcription factor IIH subunit 1
696248 , Y RPA3 replication protein A3
696410 , N CUL4B cullin 4B
698023 , N POLE DNA polymerase epsilon, catalytic subunit
698829 , N ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit
698987 , N RFC1 replication factor C subunit 1
699274 , Y_N RPA4 replication protein A4
699871 , Y CDK7 cyclin dependent kinase 7
700100 , M POLD2 DNA polymerase delta 2, accessory subunit
700107 , Y GTF2H5 general transcription factor IIH subunit 5
700737 , N GTF2H2 general transcription factor IIH subunit 2
700938 , N XPC XPC complex subunit, DNA damage recognition and repair factor
703905 , N MNAT1 MNAT1 component of CDK activating kinase
705074 , N POLE3 DNA polymerase epsilon 3, accessory subunit
707526 , M POLE2 DNA polymerase epsilon 2, accessory subunit
707822 , N ERCC5 ERCC excision repair 5, endonuclease
710153 , N ERCC6 ERCC excision repair 6, chromatin remodeling factor
710252 , S RBX1 ring-box 1
710562 , Y POLE4 DNA polymerase epsilon 4, accessory subunit
711328 , Y RAD23B RAD23 homolog B, nucleotide excision repair protein
712632 , N POLD4 DNA polymerase delta 4, accessory subunit
712641 , N ERCC4 ERCC excision repair 4, endonuclease catalytic subunit
713813 , N DDB2 damage specific DNA binding protein 2
714220 , Y RFC3 replication factor C subunit 3
714285 , M GTF2H4 general transcription factor IIH subunit 4
714302 , Y CUL4A cullin 4A
715485 , N ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit
715705 , N XPA XPA, DNA damage recognition and repair factor
716612 , Y RPA2 replication protein A2
717979 , N RAD23A RAD23 homolog A, nucleotide excision repair protein
718006 , Y PCNA proliferating cell nuclear antigen
718528 , N LIG1 DNA ligase 1
721272 , M RPA1 replication protein A1
100426721 , Y RFC4 replication factor C subunit 4
106992484 , Y_N GTF2H3 general transcription factor IIH subunit 3
114672263 , N LOC114672263 DNA damage-binding protein 2-like


List of genes in cfa


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
474494 , S RBX1 ring-box 1
476067 , Y DDB1 damage specific DNA binding protein 1
476105 , N ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit
476521 , N XPC XPC complex subunit, DNA damage recognition and repair factor
476806 , N POLD3 DNA polymerase delta 3, accessory subunit
476881 , N GTF2H1 general transcription factor IIH subunit 1
477166 , Y PCNA proliferating cell nuclear antigen
477308 , Y RFC3 replication factor C subunit 3
477446 , N GTF2H3 general transcription factor IIH subunit 3
477499 , Y RFC5 replication factor C subunit 5
477747 , N ERCC6 ERCC excision repair 6, chromatin remodeling factor
478089 , N LOC478089 general transcription factor IIH subunit 2
478667 , Y RFC4 replication factor C subunit 4
479112 , N RFC1 replication factor C subunit 1
479156 , N CCNH cyclin H
479842 , Y ERCC4 ERCC excision repair 4, endonuclease catalytic subunit
480346 , Y MNAT1 MNAT1 component of CDK activating kinase
481078 , N CETN2 centrin 2
481449 , Y RPA3 replication protein A3
481623 , N XPA XPA, DNA damage recognition and repair factor
481656 , N RAD23B RAD23 homolog B, nucleotide excision repair protein
482008 , N LOC482008 centrin-2-like
482686 , M POLD2 DNA polymerase delta 2, accessory subunit
483096 , Y POLE4 DNA polymerase epsilon 4, accessory subunit
483626 , N DDB2 damage specific DNA binding protein 2
484922 , M RAD23A RAD23 homolog A, nucleotide excision repair protein
486223 , N POLE DNA polymerase epsilon, catalytic subunit
487225 , N ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit
489798 , M RFC2 replication factor C subunit 2
492102 , N CUL4B cullin 4B
493995 , N ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit
607683 , Y CUL4A cullin 4A
608441 , Y CDK7 cyclin dependent kinase 7
608973 , M POLE2 DNA polymerase epsilon 2, accessory subunit
610047 , N POLD1 DNA polymerase delta 1, catalytic subunit
611847 , S LOC611847 DNA polymerase delta 4, accessory subunit
612182 , Y GTF2H5 general transcription factor IIH subunit 5
612282 , N ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit
612550 , Y POLE3 DNA polymerase epsilon 3, accessory subunit
100685309 , Y LOC100685309 general transcription factor IIH subunit 3-like
100686967 , N LIG1 DNA ligase 1
100855690 , Y RPA1 replication protein A1
100855935 , N ERCC5 ERCC excision repair 5, endonuclease
100856421 , Y RPA2 replication protein A2


List of genes in sce


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
850691 , N SSL1 TFIIH/NER complex subunit SSL1
851266 , N RFA1 replication factor A subunit protein RFA1
851391 , M CDC9 DNA ligase (ATP) CDC9
851450 , Y KIN28 TFIIH complex serine/threonine-protein kinase subunit KIN28
851456 , N POL3 DNA-directed DNA polymerase delta POL3
851594 , N RAD28 Rad28p
851652 , N TFB5 TFIIH complex subunit TFB5
851699 , N DPB4 DNA polymerase epsilon noncatalytic subunit
851906 , N TFB1 TFIIH/NER complex subunit TFB1
852071 , N TFB3 TFIIH/NER complex subunit TFB3
852383 , N RFC5 replication factor C subunit 5
852385 , N POL30 proliferating cell nuclear antigen
852580 , N DPB3 DNA polymerase epsilon noncatalytic subunit
853174 , N RAD2 ssDNA endodeoxyribonuclease RAD2
853353 , N SRS2 DNA helicase SRS2
853381 , N DLS1 Dls1p
853462 , N POL31 DNA-directed DNA polymerase delta subunit POL31
853492 , N RAD26 DNA-dependent ATPase RAD26
853500 , N POL32 DNA polymerase delta subunit POL32
853531 , N RFC2 replication factor C subunit 2
853986 , N HRT1 SCF ubiquitin ligase complex subunit HRT1
854059 , N RFC4 replication factor C subunit 4
854392 , N RFC1 replication factor C subunit 1
854663 , N SSL2 TFIIH/NER complex ATPase/helicase subunit SSL2
854878 , N RAD10 DNA repair protein RAD10
855241 , N RAD14 DNA repair protein RAD14
855404 , N RFA2 Rfa2p
855426 , Y RFC3 replication factor C subunit 3
855459 , N POL2 DNA polymerase epsilon catalytic subunit
855981 , N TFB2 TFIIH/NER complex subunit TFB2
856085 , N RAD1 ssDNA endodeoxyribonuclease RAD1
856136 , N CCL1 TFIIH complex kinase subunit CCL1
856169 , P TFB4 TFIIH/NER complex subunit TFB4
856305 , M DPB2 DNA polymerase epsilon noncatalytic subunit
856674 , Y_N RAD23 Rad23p
856909 , N RAD4 Rad4p
856918 , N RAD3 TFIIH/NER complex ATP-dependent 5'-3' DNA helicase subunit RAD3


List of genes in spo


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
2538760 , Y_N rad16 DNA repair endonuclease XPF
2538775 , Y_N ssb3 DNA replication factor A subunit Ssb3
2538781 , Y ssb2 single-stranded DNA-binding protein Ssb2
2539194 , N ssl1 transcription factor TFIIH complex subunit Ssl1
2539465 , N rhp42 DNA repair protein Rhp42
2539473 , N rhp26 SNF2 family helicase Rhp26
2539627 , N cdc27 DNA polymerase delta subunit Cdc27
2539790 , N tfb2 transcription factor TFIIH complex subunit Tfb2
2540008 , M cdm1 DNA polymerase delta subunit Cdm1
2540020 , N pcn1 DNA polymerase delta processivity factor
2540215 , N rfc5 putative DNA replication factor C complex subunit Rfc5
2540255 , N cdc6 DNA polymerase delta catalytic subunit Cdc6
2540257 , N tfb5 putative transcription factor TFIIH complex subunit Tfb5
2540343 , Y_N tfb4 transcription factor TFIIH complex subunit Tfb4
2540426 , N rfc1 DNA replication factor C complex subunit Rfc1
2540471 , K mcs6 cyclin-dependent protein kinase/CDK-activating kinase Mcs6
2540481 , N rhp23 UV excision repair protein rhp23
2540555 , N mcs2 TFIIH complex cyclin Mcs2
2540627 , N cdc20 DNA polymerase epsilon catalytic subunit Pol2
2540684 , N pmh1 transcription factor TFIIH complex subunit Pmh1
2540861 , N ckn1 DNA repair ERCC8 family protein ckn1
2540887 , N swi10 DNA repair endonuclease Swi10
2540966 , N dpb4 DNA polymerase epsilon subunit Dpb4
2541051 , N rad13 DNA repair nuclease Rad13
2541111 , N adl1 putative DNA ligase
2541120 , N rhp14 DNA repair protein
2541158 , N ssb1 DNA replication factor A subunit Ssb1
2541347 , N dpb2 DNA polymerase epsilon catalytic subunit B Dpb2
2541493 , Y rfc3 DNA replication factor C complex subunit Rfc3
2541849 , N cdc17 ATP-dependent DNA ligase Cdc17
2541897 , N rbx1 RING-box protein 1
2541908 , N rfc2 DNA replication factor C complex subunit Rfc2
2542083 , N cdc1 DNA polymerase delta small subunit Cdc1
2542174 , N ptr8 transcription factor TFIIH complex ERCC-3 subunit
2542203 , N rad15 transcription factor TFIIH complex subunit Rad15
2542207 , P ddb1 damaged DNA-binding protein Ddb1
2542336 , N tfb1 putative transcription factor TFIIH complex subunit Tfb1
2542790 , Y rfc4 putative DNA replication factor C complex subunit Rfc4
2542967 , N rhp41 DNA repair protein Rhp41
2543116 , N pcu4 cullin 4
2543577 , N srs2 UvrD subfamily ATP-dependent DNA helicase
9406966 , Y_N SPCC16C4.22 histone-like transcription factor family (CBF/NF-Y)


List of genes in fca


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
677873 , Y_N CUL4B cullin 4B
101080440 , N XPC XPC complex subunit, DNA damage recognition and repair factor
101080704 , Y PCNA proliferating cell nuclear antigen
101081079 , Y DDB1 damage specific DNA binding protein 1
101081597 , Y RFC3 replication factor C subunit 3
101082665 , N MNAT1 MNAT1 component of CDK activating kinase
101084325 , Y RPA1 replication protein A1
101084979 , Y RPA2 replication protein A2
101085414 , Y RAD23B RAD23 homolog B, nucleotide excision repair protein
101085499 , N GTF2H3 general transcription factor IIH subunit 3
101085685 , N LOC101085685 basic immunoglobulin-like variable motif-containing protein
101086519 , N POLD1 DNA polymerase delta 1, catalytic subunit
101086781 , Y CDK7 cyclin dependent kinase 7
101087644 , M RAD23A RAD23 homolog A, nucleotide excision repair protein
101087758 , S RBX1 ring-box 1
101087996 , Y GTF2H5 general transcription factor IIH subunit 5
101089849 , Y POLE4 DNA polymerase epsilon 4, accessory subunit
101091076 , Y CUL4A cullin 4A
101091308 , N POLD4 DNA polymerase delta 4, accessory subunit
101091820 , N XPA XPA, DNA damage recognition and repair factor
101092211 , M DDB2 damage specific DNA binding protein 2
101092297 , Y RFC5 replication factor C subunit 5
101092399 , N ERCC6 ERCC excision repair 6, chromatin remodeling factor
101092770 , M POLE2 DNA polymerase epsilon 2, accessory subunit
101093313 , N LIG1 DNA ligase 1
101093711 , N POLD3 DNA polymerase delta 3, accessory subunit
101094345 , N RFC1 replication factor C subunit 1
101094392 , Y RFC2 replication factor C subunit 2
101094730 , N LOC101094730 general transcription factor IIH subunit 2
101095089 , M POLD2 DNA polymerase delta 2, accessory subunit
101095398 , N CCNH cyclin H
101095455 , N ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit
101095702 , N ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit
101096298 , N CETN2 centrin 2
101096662 , N ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit
101096921 , N POLE DNA polymerase epsilon, catalytic subunit
101097106 , N POLE3 DNA polymerase epsilon 3, accessory subunit
101097223 , K RPA3 replication protein A3
101097482 , N GTF2H4 general transcription factor IIH subunit 4
101098886 , Y RFC4 replication factor C subunit 4
101099176 , N ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit
101100000 , N GTF2H1 general transcription factor IIH subunit 1
101100531 , Y ERCC4 ERCC excision repair 4, endonuclease catalytic subunit


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