[←][→] cfa  SMG5 Gene
functional annotation
Function   SMG5 nonsense mediated mRNA decay factor  
GO BP
GO CC
GO MF
KEGG cfa03015 [list] [network] mRNA surveillance pathway (96 genes)
Protein XP_022276969.1  XP_038426685.1  XP_038527797.1  XP_547535.3 
BLAST XP_022276969.1  XP_038426685.1  XP_038527797.1  XP_547535.3 
Orthologous [Ortholog page] SMG5 (hsa)  Smg5 (dme)  Smg5 (mmu)  RGD1309489 (rno)  SMG5 (gga)  smg5 (dre)  Smg5 (rno)  SMG5 (mcc)  SMG5 (fca) 
Subcellular
localization
wolf
nucl 3,  cyto 3,  cyto_nucl 3,  plas 1,  extr_plas 1,  mito_pero 1  (predict for XP_022276969.1)
nucl 3,  cyto 3,  plas 1,  extr_plas 1,  mito_pero 1,  mito 1,  E.R. 1,  pero 1  (predict for XP_038426685.1)
nucl 3,  cyto 3,  plas 1,  extr_plas 1,  mito_pero 1,  extr 1,  mito 1,  E.R. 1,  pero 1  (predict for XP_038527797.1)
nucl 3,  cyto 3,  plas 1,  extr_plas 1,  mito_pero 1,  extr 1,  mito 1,  E.R. 1,  pero 1  (predict for XP_547535.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cfa03015 mRNA surveillance pathway 2
Genes directly connected with SMG5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.6 RNF40 ring finger protein 40 [detail] 489913
6.5 INTS1 integrator complex subunit 1 [detail] 100685475
6.2 TRIM28 tripartite motif containing 28 [detail] 403689
6.2 POLG DNA polymerase gamma, catalytic subunit [detail] 100856383
4.4 ZNF710 zinc finger protein 710 [detail] 488740
Coexpressed
gene list		 [Coexpressed gene list for SMG5]
Gene expression
All samples [Expression pattern for all samples]
Tissue specificity*
Link to other DBs
Entrez Gene ID 490414      
Refseq ID (protein) XP_022276969.1 
XP_038426685.1 
XP_038527797.1 
XP_547535.3 


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