| functional annotation |
| Function |
exosome component 2 |
|
| GO BP |
|
GO:0071049 [list] [network] nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription
|
(2 genes)
|
IBA
|
 |
|
GO:0071034 [list] [network] CUT catabolic process
|
(3 genes)
|
IBA
|
|
|
GO:0071035 [list] [network] nuclear polyadenylation-dependent rRNA catabolic process
|
(6 genes)
|
IBA
|
|
|
GO:0071038 [list] [network] nuclear polyadenylation-dependent tRNA catabolic process
|
(6 genes)
|
IBA
|
|
|
GO:0071051 [list] [network] polyadenylation-dependent snoRNA 3'-end processing
|
(6 genes)
|
IBA
|
|
|
GO:0043928 [list] [network] exonucleolytic catabolism of deadenylated mRNA
|
(7 genes)
|
IBA
|
|
|
GO:0034475 [list] [network] U4 snRNA 3'-end processing
|
(8 genes)
|
IBA
|
|
|
GO:0000467 [list] [network] exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
(9 genes)
|
IBA
|
|
|
GO:0034427 [list] [network] nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
|
(10 genes)
|
IBA
|
|
|
GO:0006364 [list] [network] rRNA processing
|
(154 genes)
|
IEA
|
|
|
| GO CC |
|
GO:0000176 [list] [network] nuclear exosome (RNase complex)
|
(11 genes)
|
IBA
|
|
|
GO:0000177 [list] [network] cytoplasmic exosome (RNase complex)
|
(11 genes)
|
IBA
|
|
|
GO:0000178 [list] [network] exosome (RNase complex)
|
(15 genes)
|
IBA
IEA
|
|
|
| GO MF |
|
| KEGG |
dre03018 [list] [network] RNA degradation (86 genes) |
 |
| Protein |
NP_001017572.2
|
| BLAST |
NP_001017572.2
|
| Orthologous |
[Ortholog page]
EXOSC2 (hsa)
Rrp4 (dme)
exos-2 (cel)
Exosc2 (mmu)
Exosc2 (rno)
EXOSC2 (gga)
EXOSC2 (cfa)
EXOSC2 (mcc)
RRP4 (sce)
uga1 (spo)
EXOSC2 (fca)
|
Subcellular
localization
wolf |
|
nucl 4,
cyto_nucl 4,
cyto 4,
extr 1,
pero 1
|
(predict for NP_001017572.2)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| dre03018 |
RNA degradation |
3 |
 |
Genes directly connected with exosc2 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 9.0 |
exosc7 |
exosome component 7 |
[detail] |
550247 |
| 8.3 |
bxdc2 |
brix domain containing 2 |
[detail] |
402823 |
| 8.3 |
eed |
embryonic ectoderm development |
[detail] |
550463 |
| 7.4 |
med20 |
mediator complex subunit 20 |
[detail] |
445191 |
| 5.4 |
nubp2 |
nucleotide binding protein 2 (MinD homolog, E. coli) |
[detail] |
641290 |
|
Coexpressed
gene list |
[Coexpressed gene list for exosc2]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
| Tissue specificity* |
|
exosc2 Gene
