[←][→] dre  lsm8 Gene
functional annotation
Function   LSM8 homolog, U6 small nuclear RNA associated  
GO BP
GO:0030217 [list] [network] T cell differentiation  (33 genes)  IGI IMP  
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (168 genes)  IBA IEA  
GO:0008380 [list] [network] RNA splicing  (237 genes)  IEA IMP  
GO:0006397 [list] [network] mRNA processing  (309 genes)  IEA IMP  
GO:0016070 [list] [network] RNA metabolic process  (946 genes)  IBA  
GO CC
GO:0005688 [list] [network] U6 snRNP  (6 genes)  IBA IEA  
GO:0046540 [list] [network] U4/U6 x U5 tri-snRNP complex  (19 genes)  IBA IEA  
GO:0071011 [list] [network] precatalytic spliceosome  (22 genes)  IBA  
GO:0005681 [list] [network] spliceosomal complex  (133 genes)  IEA  
GO:0005634 [list] [network] nucleus  (4679 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (934 genes)  IBA IEA  
KEGG dre03018 [list] [network] RNA degradation (86 genes)
dre03040 [list] [network] Spliceosome (143 genes)
Protein NP_001289395.1 
BLAST NP_001289395.1 
Orthologous [Ortholog page] CG2021 (dme)  LSM8 (hsa)  Lsm8 (mmu)  lsm-8 (cel)  Lsm8 (rno)  LSM8 (gga)  LSM8 (cfa)  LSM8 (mcc)  LSM8 (sce)  dis3 (spo)  LSM8 (fca) 
Subcellular
localization
wolf
cyto 7,  cyto_nucl 4,  mito 2,  E.R._mito 1  (predict for NP_001289395.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
dre03040 Spliceosome 10
dre03018 RNA degradation 4
dre03020 RNA polymerase 2
dre04623 Cytosolic DNA-sensing pathway 2
dre00190 Oxidative phosphorylation 2
Genes directly connected with lsm8 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.8 snrpe small nuclear ribonucleoprotein polypeptide E [detail] 393979
9.4 snrpf small nuclear ribonucleoprotein polypeptide F [detail] 445404
9.1 lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [detail] 573047
7.5 cenpx centromere protein X [detail] 100332714
6.2 lin52 lin-52 DREAM MuvB core complex component [detail] 777755
Coexpressed
gene list		 [Coexpressed gene list for lsm8]
Gene expression
All samples [Expression pattern for all samples]
Tissue specificity*
Link to other DBs
Entrez Gene ID 566017      
Refseq ID (protein) NP_001289395.1 


The preparation time of this page was 0.1 [sec].