| functional annotation |
| Function |
tubulin, beta 1 class VI |
|
| GO BP |
|
GO:0051225 [list] [network] spindle assembly
|
(94 genes)
|
ISO
|
 |
|
GO:0000226 [list] [network] microtubule cytoskeleton organization
|
(512 genes)
|
IBA
|
|
|
GO:0000278 [list] [network] mitotic cell cycle
|
(559 genes)
|
IBA
|
|
|
GO:0007017 [list] [network] microtubule-based process
|
(768 genes)
|
ISO
|
|
|
| GO CC |
|
| GO MF |
|
GO:0005200 [list] [network] structural constituent of cytoskeleton
|
(62 genes)
|
IBA
ISO
|
|
|
GO:0003924 [list] [network] GTPase activity
|
(279 genes)
|
IEA
|
|
|
GO:0005525 [list] [network] GTP binding
|
(353 genes)
|
IBA
|
|
|
| KEGG |
rno04145 [list] [network] Phagosome (185 genes) |
 |
| rno04540 [list] [network] Gap junction (87 genes) |
|
| rno05010 [list] [network] Alzheimer disease (391 genes) |
|
| rno05012 [list] [network] Parkinson disease (270 genes) |
|
| rno05014 [list] [network] Amyotrophic lateral sclerosis (370 genes) |
|
| rno05016 [list] [network] Huntington disease (307 genes) |
|
| rno05020 [list] [network] Prion disease (273 genes) |
|
| rno05022 [list] [network] Pathways of neurodegeneration - multiple diseases (477 genes) |
|
| rno05132 [list] [network] Salmonella infection (254 genes) |
|
| Protein |
XP_003749686.1
XP_038962667.1
|
| BLAST |
XP_003749686.1
XP_038962667.1
|
| Orthologous |
[Ortholog page]
TUBB2A (hsa)
TUBB3 (hsa)
TUBB4A (hsa)
TUBB4B (hsa)
Tubb2a (mmu)
Tubb3 (mmu)
Tubb4a (mmu)
Tubb5 (mmu)
Tubb4a (rno)
Tubb5 (rno)
betaTub56D (dme)
betaTub60D (dme)
betaTub85D (dme)
betaTub97EF (dme)
Tubb6 (mmu)
Tubb2b (mmu)
TUBB1 (hsa)
TUBB6 (hsa)
CG32396 (dme)
ben-1 (cel)
tbb-2 (cel)
tbb-1 (cel)
tbb-6 (cel)
mec-7 (cel)
tbb-4 (cel)
TUBB (hsa)
Tubb4b (mmu)
Tubb3 (rno)
TUBB8B (hsa)
Tubb2b (rno)
Tubb4b (rno)
Tubb6 (rno)
zgc:65894 (dre)
tubb4b (dre)
TUBB8 (hsa)
TUBB2B (hsa)
tubb5 (dre)
TUBB (gga)
TUBB1 (gga)
zgc:55461 (dre)
TUBB4B (gga)
TUBB2B (gga)
TUBB6 (gga)
TUBB3 (gga)
TUBB (cfa)
TUBB2A (cfa)
LOC478702 (cfa)
LOC478825 (cfa)
TUBB6 (cfa)
TUBB1 (cfa)
LOC491231 (cfa)
Tubb2a (rno)
Tubb1 (mmu)
tubb6 (dre)
tubb2 (dre)
tubb1 (dre)
TUBB (mcc)
tubb2b (dre)
zgc:123292 (dre)
TUBB1 (mcc)
TUBB4A (mcc)
TUBB2B (mcc)
LOC708952 (mcc)
TUBB8 (mcc)
LOC712533 (mcc)
LOC720677 (mcc)
LOC722862 (mcc)
LOC722929 (mcc)
tubb4bl (dre)
zgc:153264 (dre)
TUBB2A (gga)
TUB2 (sce)
nda3 (spo)
TUBB1 (fca)
TUBB4B (mcc)
TUBB4A (cfa)
TUBB4B (fca)
TUBB2B (fca)
TUBB4A (fca)
LOC101090736 (fca)
TUBB (fca)
TUBB6 (fca)
TUBB4B (cfa)
TUBB3 (cfa)
LOC106996033 (mcc)
TUBB2A (fca)
LOC114672640 (mcc)
TUBB6 (mcc)
|
Subcellular
localization
wolf |
|
cyto_nucl 4,
cyto 4,
nucl 3,
cyto_plas 3,
mito 1
|
(predict for XP_003749686.1)
|
|
cyto 4,
cyto_nucl 4,
nucl 3,
cyto_plas 2,
extr 1,
mito 1
|
(predict for XP_038962667.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| rno04512 |
ECM-receptor interaction |
4 |
 |
| rno04611 |
Platelet activation |
4 |
 |
| rno04640 |
Hematopoietic cell lineage |
4 |
 |
| rno04060 |
Cytokine-cytokine receptor interaction |
4 |
 |
| rno04061 |
Viral protein interaction with cytokine and cytokine receptor |
4 |
 |
Genes directly connected with Tubb1 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 7.5 |
Ppbp |
pro-platelet basic protein |
[detail] |
246358 |
| 7.3 |
Clec1b |
C-type lectin domain family 1, member B |
[detail] |
500336 |
| 6.5 |
Gp1ba |
glycoprotein Ib platelet subunit alpha |
[detail] |
691992 |
| 5.2 |
Gp5 |
glycoprotein V (platelet) |
[detail] |
25259 |
| 3.5 |
Muc20 |
mucin 20, cell surface associated |
[detail] |
303886 |
|
Coexpressed
gene list |
[Coexpressed gene list for Tubb1]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
| Tissue specificity* |
|
Tubb1 Gene
