[←][→] dre  u2af2b Gene
functional annotation
Function   U2 small nuclear RNA auxiliary factor 2b  
GO BP
GO:0008380 [list] [network] RNA splicing  (237 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (309 genes)  IEA  
GO CC
GO:0089701 [list] [network] U2AF complex  (4 genes)  IBA  
GO:0000243 [list] [network] commitment complex  (7 genes)  IBA  
GO:0071004 [list] [network] U2-type prespliceosome  (16 genes)  IBA  
GO:0016607 [list] [network] nuclear speck  (88 genes)  IBA  
GO:0005634 [list] [network] nucleus  (4679 genes)  IEA  
GO MF
GO:0030628 [list] [network] pre-mRNA 3'-splice site binding  (5 genes)  IBA  
GO:0008187 [list] [network] poly-pyrimidine tract binding  (12 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (934 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3107 genes)  IEA  
KEGG dre03040 [list] [network] Spliceosome (143 genes)
Protein NP_991252.1  XP_009292306.1  XP_009292307.1  XP_009292308.1  XP_009292309.1  XP_009292310.1  XP_009292311.1  XP_009292312.1 
BLAST NP_991252.1  XP_009292306.1  XP_009292307.1  XP_009292308.1  XP_009292309.1  XP_009292310.1  XP_009292311.1  XP_009292312.1 
Orthologous [Ortholog page] U2AF2 (hsa)  U2af2 (mmu)  U2af50 (dme)  LS2 (dme)  uaf-1 (cel)  U2af2 (rno)  u2af2a (dre)  U2AF2 (mcc)  cct5 (spo)  U2AF2 (cfa)  U2AF2 (fca) 
Subcellular
localization
wolf
nucl 7,  cyto_nucl 5,  cyto 3,  cyto_mito 1  (predict for NP_991252.1)
nucl 7,  cyto_nucl 5,  cyto 3,  cyto_mito 1  (predict for XP_009292306.1)
nucl 7,  cyto_nucl 5,  cyto 3,  cyto_mito 1  (predict for XP_009292307.1)
nucl 6,  cyto_nucl 5,  cyto 3,  cyto_mito 2  (predict for XP_009292308.1)
nucl 6,  cyto_nucl 5,  cyto 3,  cyto_mito 2  (predict for XP_009292309.1)
nucl 6,  cyto_nucl 5,  cyto 3,  cyto_mito 2  (predict for XP_009292310.1)
nucl 6,  cyto_nucl 5,  cyto 3,  cyto_mito 2  (predict for XP_009292311.1)
nucl 6,  cyto_nucl 5,  cyto 3,  cyto_mito 2  (predict for XP_009292312.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
dre03040 Spliceosome 9
dre03013 Nucleocytoplasmic transport 3
Genes directly connected with u2af2b on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.4 hdac1 histone deacetylase 1 [detail] 192302
7.4 syncrip synaptotagmin binding, cytoplasmic RNA interacting protein [detail] 326663
7.2 snrnp200 small nuclear ribonucleoprotein 200 (U5) [detail] 799690
6.7 u2af2a U2 small nuclear RNA auxiliary factor 2a [detail] 557103
Coexpressed
gene list		 [Coexpressed gene list for u2af2b]
Gene expression
All samples [Expression pattern for all samples]
Tissue specificity*
Link to other DBs
Entrez Gene ID 402989      
Refseq ID (protein) NP_991252.1 
XP_009292306.1 
XP_009292307.1 
XP_009292308.1 
XP_009292309.1 
XP_009292310.1 
XP_009292311.1 
XP_009292312.1 


The preparation time of this page was 0.1 [sec].