Orthologous genes in OrthoFinder**

Species Gene Description
 dre-u.3  ptbp2b  polypyrimidine tract binding protein 2b 
 dre-r.3  ptbp2b  polypyrimidine tract binding protein 2b 
 dre-m.5  ptbp2b  polypyrimidine tract binding protein 2b 
 dre-u.3  ptbp2a  polypyrimidine tract binding protein 2a 
 dre-u.3  ptbp1a  polypyrimidine tract binding protein 1a 
 dre-u.3  ptbp3  polypyrimidine tract binding protein 3 
 hsa-u.4  PTBP3  polypyrimidine tract binding protein 3 
 hsa-u.4  PTBP2  polypyrimidine tract binding protein 2 
 hsa-u.4  PTBP1  polypyrimidine tract binding protein 1 
 mmu-u.4  Ptbp1  polypyrimidine tract binding protein 1 
 mmu-u.4  Ptbp2  polypyrimidine tract binding protein 2 
 mmu-u.4  Ptbp3  polypyrimidine tract binding protein 3 
 rno-u.3  Ptbp3  polypyrimidine tract binding protein 3 
 rno-u.3  Ptbp2  polypyrimidine tract binding protein 2 
 rno-u.3  Ptbp1  polypyrimidine tract binding protein 1 
 gga-u.3  PTBP2  polypyrimidine tract binding protein 2 
 gga-u.3  PTBP1  polypyrimidine tract binding protein 1 
 mcc-u.3  PTBP1  polypyrimidine tract binding protein 1 
 mcc-u.3  PTBP3  polypyrimidine tract binding protein 3 
 mcc-u.3  PTBP2  polypyrimidine tract binding protein 2 
 cfa-u.3  PTBP1  polypyrimidine tract binding protein 1 
 cfa-u.3  PTBP3  polypyrimidine tract binding protein 3 
 cfa-u.3  PTBP2  polypyrimidine tract binding protein 2 
 dme-u.3  heph  hephaestus 
 cel-u.3  ptb-1  uncharacterized protein 

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Top 50 coexpressed genes to ptbp2b (dre-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 dre3040   Spliceosome  7 139 7.33
 dre5168   Herpes simplex virus 1 infection  5 173 4.19
 dre3008   Ribosome biogenesis in eukaryotes  1 77 -
 dre3015   mRNA surveillance pathway  2 99 -
 dre4310   Wnt signaling pathway  2 220 -

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dre:ptbp2b (polypyrimidine tract binding protein 2b) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID
Other ID LINK Target Reference

dre-u.3
for
ptbp2b


dre-r.3
for
ptbp2b


dre-m.5
for
ptbp2b


dre-u.3
for
ptbp2a


dre-u.3
for
ptbp1a


dre-u.3
for
ptbp3


hsa-u.4
for
PTBP3


hsa-u.4
for
PTBP2


hsa-u.4
for
PTBP1


mmu-u.4
for
Ptbp1


mmu-u.4
for
Ptbp2


mmu-u.4
for
Ptbp3


rno-u.3
for
Ptbp3


rno-u.3
for
Ptbp2


rno-u.3
for
Ptbp1


gga-u.3
for
PTBP2


gga-u.3
for
PTBP1


mcc-u.3
for
PTBP1


mcc-u.3
for
PTBP3


mcc-u.3
for
PTBP2


cfa-u.3
for
PTBP1


cfa-u.3
for
PTBP3


cfa-u.3
for
PTBP2


dme-u.3
for
heph


cel-u.3
for
ptb-1

1 srsf4 serine and arginine rich splicing factor 4 321872 6.0 3.0
2.5
6.9
5.6
2.5
1.5
0.1
0.1
1.2
1.0
4.1
3.3
4.2
3.0
4.1
3.3
4.1
3.8
2.1
1.2
2.7
1.4
3.4
2.0
5.1
3.8
2.6
1.7
6.2
3.4
4.5
2.9
1.3
0.9
2.3
2.2
6.2
3.6
1.5
0.4
4.2
1.2
1.7
1.4
0.4
0.3
2 proser1 proline and serine rich 1 556416 6.0 3.4
2.1
4.1
1.1
1.8
2.8
1.1
3.3
2.6
2.8
-0.7
-0.2
0.7
1.9
2.4
2.0
2.3
1.3
1.3
2.9
1.6
0.2


3 phf21ab PHD finger protein 21Ab 565544 5.8 3.1

4.1
1.3
0.4
0.9
1.7
-0.6
-0.2
1.9
-0.8
0.4
1.4
-0.2
0.1
0.2
-0.2
0.9
1.3
0.6
1.7
1.2


4 ewsr1b EWS RNA-binding protein 1b 322880 5.8 3.3
2.0
3.7
2.0
2.1
1.6
-0.2
-0.6
-0.2
2.9
6.4
4.0
1.6
-0.0
-0.3
2.0
3.3
0.4
0.9
3.4
-0.3
-0.8
4.7
-0.4
1.9
0.1

5 scml2 Scm polycomb group protein like 2 559561 5.7 3.0

2.7
-0.1
0.1
-0.3
0.1
-1.3
-0.3
-0.8
3.0
-0.1
2.1
1.8
0.9
0.3
1.5
1.4
0.0
-1.1
0.9
-1.1
1.7
0.6
1.4
0.3
1.1
-1.3
1.8
-0.7
0.5
-0.5
-2.3
0.9
0.5
-0.5
-1.7
-0.8
-1.5
0.2
-0.9
1.6

6 ilf3b interleukin enhancer binding factor 3b 321868 5.7 3.3
1.9
2.6
1.1
-0.3
-1.6
2.2
10.0
3.1
1.5
-0.4
-1.3
2.4
2.3
0.7
0.7
7.3
0.1
1.5
4.5
-1.1
-1.2


7 pak2b p21 protein (Cdc42/Rac)-activated kinase 2b 325034 5.6 3.5
1.6
2.3
1.4
3.4
0.4
1.5
0.6
5.3
1.9
0.8
-1.1
1.1
-0.2
2.0
-0.3
2.3
1.7
3.9
-0.3
7.4
-0.1
2.0
0.1
2.4
-0.1
1.0
0.4
1.3
0.6
3.8
-1.1
4.3
1.4
1.3
0.2
1.1
-0.7
6.0
-0.5
0.6
-0.3
2.5
1.4
1.5
1.2
8 ewsr1a EWS RNA-binding protein 1a 323597 5.4 2.4
2.6
3.7
2.0
2.1
1.6
-0.2
-0.6
-0.2
2.9
6.4
4.0
1.6
-0.0
-0.3
2.0
3.3
0.4
0.9
3.4
-0.3
-0.8
4.7
-0.4
1.9
0.1

9 znf281a zinc finger protein 281a 100005963 5.4 2.8

3.9
3.0
0.9
0.8
0.8
-0.6
1.2
3.0
0.6
-0.1
2.1
0.1
-0.8
1.5
0.7
-0.6
2.8
-0.6
1.4
2.1
-0.5
-0.5
0.7


10 hes6 hes family bHLH transcription factor 6 373116 5.3 3.3
1.5
1.7
1.2
0.2
0.1
0.2
0.1
-0.3
0.1
0.5
-0.8
-1.7
-0.7
-0.3
0.9
-0.2
-0.4
0.5
-1.5
-0.8





11 si:ch211-114c12.2 si:ch211-114c12.2 336578 5.3 2.7
2.2






















12 tle2a TLE family member 2, transcriptional corepressor a 565013 5.3 3.2
1.7
3.7
1.5
0.5
-0.0
-0.3
-0.5
2.0
0.9
1.8
1.6
2.9
1.8
1.9
0.5
1.4
0.7
1.4
1.3
3.2
1.3
1.1
0.9
1.7
1.6
1.6
0.7
1.6
1.2
1.4
0.6
1.8
0.9
2.2
1.6
1.6
1.1
1.5
0.7
1.8
0.8
2.2
-0.2
13 srsf2a serine and arginine rich splicing factor 2a 406691 5.3 2.9
2.0
5.3
2.5
2.5
2.3
0.7
-0.6
0.3
-0.7
4.8
0.1
5.0
1.0
5.1
2.5
0.6
1.1
1.9
4.7
2.5
5.2
4.3
0.2
0.4
-0.9
0.6
0.5
4.4
0.2
0.3
-0.4
-1.1
14 tmeff1b transmembrane protein with EGF-like and two follistatin-like domains 1b 553511 5.2 3.1
1.7
1.6
0.6
0.5
0.9
1.6
-0.9
-1.6
0.8
0.8
-0.5
0.4
-1.7
0.4
-0.8
-0.1
-0.3
1.8
-0.9
0.3
1.8


15 ncoa5 nuclear receptor coactivator 5 447849 5.1 3.7
0.9
3.6
1.8
1.2
-0.9
0.4
3.4
2.5
0.9
-0.4
-0.1
2.1
2.2
0.4
1.6
2.2
-0.8
0.1
3.1
0.2
-1.5
1.5

16 dcaf7 ddb1 and cul4 associated factor 7 337565 5.1 2.9
1.7
2.9
1.1
0.2
1.1
-2.2
4.4
1.5
0.3
2.3
1.0
-0.2
0.6
-0.0
1.1
2.2
0.4
-1.0
0.9
-1.3
-0.7
3.2
0.8
0.8
17 yy1a YY1 transcription factor a 322397 5.0 2.4
2.2
2.4
2.2
2.9
-2.4
0.7
0.3
2.6
-0.9
0.9
-0.1
2.7
-0.1
1.5
0.5
4.0
1.7
3.9
1.8
2.4
1.8
1.4
-1.4
0.6
0.3
1.9
1.0
1.1
3.3
-0.3
0.5
1.4
0.4
2.6

18 srsf2b serine and arginine rich splicing factor 2b 323700 5.0 3.1
1.5
5.3
2.5
2.5
2.3
0.7
-0.6
0.3
-0.7
4.8
0.1
5.0
1.0
5.1
2.5
0.6
1.1
1.9
4.7
2.5
5.2
4.3
0.2
0.4
-0.9
0.6
0.5
4.4
0.2
0.3
-0.4
-1.1
19 nfyc nuclear transcription factor Y, gamma 323445 5.0 2.6

3.8
0.9
-0.8
0.4
2.9
2.0
3.4
1.5
-0.5
-0.4
0.8
1.6
-0.2
0.9
3.1
-0.9
-0.2
2.3
0.3
-1.1
0.6
0.1
20 znf16l zinc finger protein 16 like 570544 4.9 2.6























21 srsf3a serine and arginine rich splicing factor 3a 368925 4.9 2.6

5.2
2.1
1.2
-0.5
0.0
-1.2
1.3
0.4
4.2
3.7
2.9
1.9
3.1
2.4
3.0
2.1
1.3
-0.4
2.2
2.1
1.9
2.2
1.1
3.3
2.8
-0.0
-0.4
3.7
0.1
2.0
0.8
3.7
2.2
1.1
-1.2
2.2
1.7
1.3
1.2
0.5
22 ubap2a ubiquitin associated protein 2a 563733 4.9 2.6

2.8
2.4
0.3
-0.6
0.2
0.2
2.3
0.2
1.7
0.2
5.2
3.6
3.2
3.1
0.1
-0.2
0.3
-0.2
2.5
-0.4
0.1
-0.2
3.2
2.2
-0.2
-0.9
1.6
1.4
3.9
2.6
0.3
-0.5
0.5
0.2
2.9
2.2
0.2
-1.8
-1.3
-1.9
2.4
0.1
23 nr2c1 nuclear receptor subfamily 2, group C, member 1 553649 4.9 2.6

1.2
-0.1
3.7
1.0
0.4
0.2
2.5
-0.8
3.6
2.3
1.5
-0.4
0.5
-0.9
0.7
0.7
1.4
-1.2
1.8
-1.0
1.2
0.6
0.2
-0.0
0.8
0.5
0.6
-0.6
0.4
-0.3
1.5
0.6
1.9
-0.2
1.7
0.1
3.1
1.4
2.0
0.8
0.0
2.6
24 gabpa GA binding protein transcription factor subunit alpha 58110 4.8 2.6
1.8
3.0
1.8
-1.0
0.5
0.7
2.6
2.7
1.1
3.9
3.4
2.2
2.2
1.3
1.3
0.7
2.5
1.4
0.3
3.1
1.5
-0.7

25 fmnl2b formin-like 2b 492608 4.8 2.5

1.3
1.3
2.0
1.7
2.4
0.7
1.4
0.3
1.1
-0.4
0.4
-0.2
1.4
0.5
1.2
0.5
1.3
-0.6
1.5
1.2
0.9
0.3
2.2
0.6
0.1
-1.1
2.2
-0.0
1.1
0.1
0.5
-0.5
0.6
0.5
1.0
-0.9
0.5
-1.1
0.2
-1.2
0.0
0.9
0.3
26 msl2a MSL complex subunit 2a 564400 4.8 2.6
1.8
4.3
0.6
2.5
0.4
0.0
-0.0
4.0
3.6
2.1
0.9
1.1
3.8
2.1
1.1
0.6
2.0
0.8
1.0
1.3
2.2
1.3
2.5
2.4
0.2

27 tardbpa TAR DNA binding protein a 386630 4.7 2.1
2.3
1.4
0.6
2.2
1.1
0.4
-0.6
0.8
3.1
2.7
1.7
3.1
0.4
1.3
1.0
2.1
1.3
2.6
1.7
-0.4
1.1
4.1
-0.4
1.9
0.6
-0.1
0.2
28 mbd3b methyl-CpG binding domain protein 3b 321217 4.7 2.5
1.9
4.0
1.1
1.4
0.2
0.9
-0.2
1.5
-0.5
-0.7
-1.2
2.7
1.8
2.1
0.5
-0.9
-2.2
2.1
-1.9
2.5
0.3
-0.9
-0.9
1.7
1.6
0.9
-0.8
3.0
-0.2
2.0
0.7
1.7
-0.4
0.9
-1.5
3.2
1.3
2.2
-0.4
0.1
-2.0
2.1

29 wtap WT1 associated protein 334058 4.6 2.6
1.6
3.6
2.2
-0.1
0.7
3.1
2.2
0.1
0.7
1.4





1.8
0.8
1.6
0.2
-0.6
1.4
1.3

30 hnrnpl heterogeneous nuclear ribonucleoprotein L 394074 4.6 2.7
1.6
1.9
2.0
-0.8
1.4
1.1
2.5
1.6
8.7
1.0
5.1
1.8
3.2
1.0
1.1
-0.6
0.0
-1.1
4.1
1.1
4.9
0.4
1.7
1.1
0.4
-0.4
4.5
-0.5
0.3
-0.2
2.1
1.2
6.8
-0.6
1.7
0.4
3.6
-0.1
5.2
0.3
31 srsf9 serine and arginine rich splicing factor 9 405835 4.6 2.4

6.9
5.6
2.5
1.5
0.1
0.1
1.2
1.0
4.1
3.3
4.2
3.0
4.1
3.3
4.1
3.8
2.1
1.2
2.7
1.4
3.4
2.0
5.1
3.8
2.6
1.7
6.2
3.4
4.5
2.9
1.3
0.9
2.3
2.2
6.2
3.6
1.5
0.4
4.2
1.2
1.7
1.4
0.4
0.3
32 scaf4b SR-related CTD-associated factor 4b 552961 4.6 2.4

2.3
1.9
2.1
0.7
0.5
-0.8
2.3
1.2
4.4
1.1
5.2
2.1
2.2
1.3
2.6
-0.5
0.5
-0.5
0.3
0.1
2.0
-0.4
2.8
1.9
2.1
1.0
1.5
0.7
3.5
1.2
1.8
1.0
2.2
1.3
4.8
1.8
1.1
0.6
1.2
-0.5
1.4
0.8
33 csnk2b casein kinase 2, beta polypeptide 30428 4.5 2.4

3.1
1.5
0.8
1.5
-0.1
2.9
2.5
0.4
-0.9
-1.4
-0.7
1.7
0.6
0.3
0.7
-0.4
0.3
3.7
-1.2
-1.5
2.8
0.5
0.2
34 tfap4 transcription factor AP-4 (activating enhancer binding protein 4) 100318080 4.4 2.3

3.5
1.7
0.6
-0.5
1.0
2.5
2.5
2.6
0.7
0.8
1.5
2.6
2.2
1.5
1.1
-0.2
0.7
1.7
-1.2
-1.0
3.6
2.0
35 si:ch211-197h24.6 si:ch211-197h24.6 560245 4.4 3.2
0.9
3.1
0.1
-1.1









-0.3
-0.6








36 ss18 SS18 subunit of BAF chromatin remodeling complex 326668 4.4 2.2
1.9
5.2
0.6
0.7
-0.1
0.4
-0.3
1.5
0.6
1.4
1.2
2.9
-0.4
4.3
-0.2
3.1
0.5
2.0
-0.4
2.0
0.4
0.4
-0.6
4.5
-0.9
1.2
1.0
2.8
-1.0
2.9
-0.7
1.0
-0.7
1.4
0.4
1.4
0.7
0.9
0.8
1.8
1.1
1.5
0.5
37 hnrnpm heterogeneous nuclear ribonucleoprotein M 555643 4.4 2.6
1.5
3.0
2.5
-1.0
-1.2
0.3
-1.0
-0.0
-0.5
1.9
1.1
5.2
-0.5
3.6
1.3
2.5
0.8
1.1
-0.5
1.0
-0.1
6.4
-0.1
3.9
1.9
2.5
0.9
4.2
1.3
5.8
1.2
0.8
-1.4
2.7
-0.3
6.9
-0.5
0.1
-0.2
2.4
0.7
1.6
-0.5
38 nfyba nuclear transcription factor Y, beta a 550227 4.3 2.3

2.0
0.8
1.4
-1.2
0.1
-1.0
0.0
1.6
-0.4
0.6
1.0
1.5
0.1
1.0
0.1
2.4
0.5
-0.3
1.3
1.6
-0.9
0.5
3.3
-1.4
1.1
39 znf414 zinc finger protein 414 562459 4.3 2.3

1.8
1.0
1.6
-0.9
1.7
3.2
1.7
0.7
-0.4
-0.3
0.4
3.1
-0.2
-1.7
1.0
-1.4
1.1
2.5
-1.7
1.0


40 LOC103910274 nucleus accumbens-associated protein 1-like 103910274 4.3 2.3

2.9
0.6
-0.3
-1.2
1.4
0.5
0.5
-0.8
3.1
3.7
-0.6
1.0
1.1
-1.4
1.5


1.0
1.2
0.8
2.1
-0.3
0.2


41 nr2f6a nuclear receptor subfamily 2, group F, member 6a 325637 4.3 2.1
1.9
2.1
1.8
3.2
1.9
0.9
0.1
0.0
-0.2
0.3
0.0
0.5
0.4
0.7
0.5
1.1
1.0
0.9
-0.2
0.5
0.3
1.0
0.7
2.0
0.8
1.1
0.3
0.7
-0.2
0.7
0.2
0.8
-0.2
0.5
0.2
0.7
0.3
0.8
0.2
0.3
-0.8
0.3
-0.2
2.7
-0.3
42 hnrnpa0a heterogeneous nuclear ribonucleoprotein A0a 323529 4.2 2.4
1.5
2.4
2.2
2.0
1.7
0.9
0.2
0.7
1.0
5.0
2.5
2.5
0.9
0.6
0.5
1.9
0.4
2.3
3.5
-0.5
1.0
5.0
2.3
0.3


43 zfr zinc finger RNA binding protein 321659 4.2 1.0
3.0
1.2
-0.9
2.7
1.2
-0.3
-1.3
1.8
2.4
2.3
0.6
-1.4
2.8
-0.0
1.6
-2.2
1.1
-2.3
2.5
2.0
-1.2
-1.8
3.5
0.4
1.5
0.4
0.5
1.6
2.9
0.8
-0.5
1.9
0.2
0.3
44 epc1b enhancer of polycomb homolog 1 (Drosophila) b 566102 4.2 2.2

3.0
2.0
2.4
0.7
-0.5
-0.7
0.9
3.1
1.2
0.5
4.3
2.7
2.5
-1.5
4.1
2.9
1.2
0.3
4.0
3.2
2.2
0.0
0.1
-0.0
1.7
1.4
2.6
0.6
-0.6
-1.1
1.2
0.6
4.0
1.8
2.3
1.7
45 scaf8 SR-related CTD-associated factor 8 326092 4.2 2.2

2.3
1.9
2.1
0.7
0.5
-0.8
2.3
1.2
4.4
1.1
5.2
2.1
2.2
1.3
2.6
-0.5
0.5
-0.5
0.3
0.1
2.0
-0.4
2.8
1.9
2.1
1.0
1.5
0.7
3.5
1.2
1.8
1.0
2.2
1.3
4.8
1.8
1.1
0.6
1.2
-0.5
1.4
0.8
46 smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 322248 4.2 2.1
1.8
2.7
-0.4
1.2
0.2
1.2
0.8
1.8
1.2
-0.1
0.2
0.8
1.9
-0.3
3.1
2.0
1.8
1.5
1.0
-0.7
1.5
1.0
-0.9
47 ddx39b DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 393917 4.2 2.5
1.4
2.6
2.4
1.3
0.6
-0.2
-0.4
0.1
2.2
5.2
5.4
3.8
2.7
-0.4
-0.0
-0.9
0.3
-0.3
2.9
0.7
4.9
4.5
0.9
1.1
4.2
1.3
0.8
-0.9
1.9
-0.3
5.4
3.6
1.3
-0.4
1.2
-0.6
1.0
-0.5
48 si:dkey-276j7.1 si:dkey-276j7.1 561769 4.1 2.6
1.3
2.3
0.5
1.1
-0.3
-1.1
0.3
-0.4
-0.4
0.9
0.2
0.0
0.2





0.5
-0.1
0.3


49 ilf3a interleukin enhancer binding factor 3a 324431 4.1 2.3
1.6
5.1
0.6
-0.0
-0.1
1.3
0.7
-0.4
-0.7
0.2
-1.0
0.2
-0.2
0.6
0.5
0.2
-0.8
-0.9
-1.3
-0.5
-1.0
0.9
0.9
-0.3
-1.1
-0.0
-0.9
-0.6
-1.3
-0.1
-1.0
-1.1
-1.2
0.7
0.3
1.4
-0.4
-0.9
1.6
0.4
-0.3
50 ep400 E1A binding protein p400 562355 4.1 2.2

2.5
-0.0
-0.4
1.4
0.4
2.5
2.6
0.9
0.9
0.0
0.2
2.5
-0.0
2.2
2.0
-1.4
-0.3
1.7
-0.9
0.1


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