Orthologous genes in OrthoFinder**

Species Gene Description
 hsa-u.4  CHD3  chromodomain helicase DNA binding protein 3 
 hsa-r.6  CHD3  chromodomain helicase DNA binding protein 3 
 hsa-m.7  CHD3  chromodomain helicase DNA binding protein 3 
 hsa-m2.4  CHD3  chromodomain helicase DNA binding protein 3 
 hsa-u.4  CHD5  chromodomain helicase DNA binding protein 5 
 hsa-u.4  CHD4  chromodomain helicase DNA binding protein 4 
 mcc-u.3  CHD4  chromodomain helicase DNA binding protein 4 
 mcc-u.3  CHD3  chromodomain-helicase-DNA-binding protein 3 
 mcc-u.3  CHD5  chromodomain helicase DNA binding protein 5 
 mmu-u.4  Chd3  chromodomain helicase DNA binding protein 3 
 mmu-u.4  Chd4  chromodomain helicase DNA binding protein 4 
 mmu-u.4  Chd5  chromodomain helicase DNA binding protein 5 
 rno-u.3  Chd5  chromodomain helicase DNA binding protein 5 
 rno-u.3  Chd3  chromodomain helicase DNA binding protein 3 
 rno-u.3  Chd4  chromodomain helicase DNA binding protein 4 
 cfa-u.3  CHD5  chromodomain helicase DNA binding protein 5 
 cfa-u.3  CHD3  chromodomain helicase DNA binding protein 3 
 cfa-u.3  CHD4  chromodomain helicase DNA binding protein 4 
 gga-u.3  CHD5  chromodomain helicase DNA binding protein 5 
 gga-u.3  CHD4  chromodomain helicase DNA binding protein 4 
 dre-u.3  chd3  chromodomain helicase DNA binding protein 3 
 dre-u.3  chd5  chromodomain helicase DNA binding protein 5 
 dre-u.3  chd4b  chromodomain helicase DNA binding protein 4b 
 dme-u.3  Mi-2  Mi-2 
 dme-u.3  Chd3  Chd3 
 cel-u.3  chd-3  Chromodomain-helicase-DNA-binding protein 3 homolog 
 cel-u.3  let-418  Protein let-418 

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Top 50 coexpressed genes to CHD3 (hsa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 hsa4070   Phosphatidylinositol signaling system  4 90 3.82
 hsa562   Inositol phosphate metabolism  3 68 2.95
 hsa4072   Phospholipase D signaling pathway  2 148 -
 hsa4015   Rap1 signaling pathway  2 210 -
 hsa4020   Calcium signaling pathway  2 240 -

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hsa:CHD3 (chromodomain helicase DNA binding protein 3) External Links;


Show/Hide Columns:          
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID
Other ID CoexPub LINK Target Reference

hsa-u.4
for
CHD3


hsa-r.6
for
CHD3


hsa-m.7
for
CHD3


hsa-m2.4
for
CHD3


hsa-u.4
for
CHD5


hsa-u.4
for
CHD4


mcc-u.3
for
CHD4


mcc-u.3
for
CHD3


mcc-u.3
for
CHD5


mmu-u.4
for
Chd3


mmu-u.4
for
Chd4


mmu-u.4
for
Chd5


rno-u.3
for
Chd5


rno-u.3
for
Chd3


rno-u.3
for
Chd4


cfa-u.3
for
CHD5


cfa-u.3
for
CHD3


cfa-u.3
for
CHD4


gga-u.3
for
CHD5


gga-u.3
for
CHD4


dre-u.3
for
chd3


dre-u.3
for
chd5


dre-u.3
for
chd4b


dme-u.3
for
Mi-2


dme-u.3
for
Chd3


cel-u.3
for
chd-3


cel-u.3
for
let-418

1 SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 6601 1 6.9 6.7
2.1
5.5
0.0
-0.8
8.0
6.2
6.6
4.1
2.9
1.9
0.4
-0.7
4.7
1.2
7.8
2.5
1.1
0.3
1.5
-1.3
3.3
1.4
3.6
2.5
0.3
0.1
5.8
2.4
5.8
4.8
3.5
0.2
6.0
3.2
3.6
3.3
2.9
0.7
8.2
2.2
11.1
-0.5
1.9
3.1
2 SGSM2 small G protein signaling modulator 2 9905 0 6.6 5.9
3.3
5.8
3.1
1.0
-0.3
-0.8
0.9
-0.7
3.1
-0.1
1.4
1.3
3.0
0.3
0.6
-0.2
3.7
2.9
2.1
0.1
3.1
0.1
2.2
-0.7
2.4
1.2
2.6
0.9
1.2
-0.8
3.7
1.7
-1.0
-1.1
1.7
1.0
2.3
0.9
1.3
0.2
0.5
0.1
0.6
-0.1
0.2
0.9
3 PRRC2B proline rich coiled-coil 2B 84726 0 6.0 6.5
2.9
4.2
0.4
3.1
4.2
2.9
0.5
4.4
3.4
1.2
1.8
3.3
4.7
1.8
2.0
1.1
2.7
1.9
2.2
1.6
0.1
-0.8
3.9
3.8


7.3
4.6
4 RAI1 retinoic acid induced 1 10743 1 5.8 5.6
2.1
4.6
1.3
0.9
1.4
2.6
0.5
4.0
3.3
-0.3
0.2
3.8
3.0
2.1
2.4
1.0
2.3
0.0
2.9
0.8
1.2




5 UBTF upstream binding transcription factor 7343 0 5.4 5.2
2.4
4.2
1.5
5.5
5.6
2.6
0.6
0.9
7.5
0.3
0.2
2.1
4.7
0.2
1.2
2.1
2.0
3.7
1.6
1.4
2.3




6 PACS1 phosphofurin acidic cluster sorting protein 1 55690 0 5.3 5.0
2.6
4.3
0.6
0.2
1.1
0.7
2.3
1.2
2.6
1.2
0.0
-1.3
2.0
1.8
0.9
0.5
0.9
0.3
-0.2
-0.3
1.6
1.5
0.6
0.5
0.5
-0.4
2.5
1.6
1.7
-1.1
1.9
0.9
2.6
-0.1
1.8
0.4
1.4
0.7
1.4
0.1
-0.0
0.3
0.8
2.1
7 SCARNA21 small Cajal body-specific RNA 21 677763 0 5.3 5.3

























8 TP53BP1 tumor protein p53 binding protein 1 7158 0 5.2 5.4
0.6
3.8
0.0
7.1
5.5
4.0
0.3
2.9
3.5
1.0
0.7
1.0
1.2
-0.0
3.2
2.5
1.0
4.8
1.7
0.0
1.3


3.7
6.3
9 MLLT6 MLLT6, PHD finger containing 4302 0 5.2 5.1
3.4
4.0
-0.9
2.4
2.5
4.4
-1.0
3.5
4.4
1.0
1.1
1.5
2.0
-0.1
1.3
1.6
3.3
0.1







10 ZNF609 zinc finger protein 609 23060 0 5.1 5.8
1.7
3.1
0.2
-0.8
5.2
2.2
2.6
2.1
4.8
-0.1
0.1
-1.1
1.7
1.7
6.7
2.0
2.0
0.7
1.0
0.5
1.3
1.0
4.4
0.9
0.8
-0.4
1.9
-0.3
4.0
1.5
1.1
2.5
0.5
2.4
-0.2
1.4
0.9
5.0
4.1
3.7
-1.2


11 ZBTB4 zinc finger and BTB domain containing 4 57659 0 5.0 4.6
1.7
4.2
0.2
0.1
4.0
4.0
-0.3
3.4
2.1
0.2
0.5
1.6
0.9
2.0
2.1
0.0


4.5
2.3
2.3




12 PPP1R9B protein phosphatase 1 regulatory subunit 9B 84687 0 4.9 4.7
2.2
4.0
0.9
4.2
2.3
5.3
1.4
4.1
2.9
0.1
0.2
3.8
1.0
0.2
1.8
0.8
1.3
1.2
2.3
0.0
2.0
0.3
3.0
1.6
3.4
-0.8
1.3
0.8
13 ERC1 ELKS/RAB6-interacting/CAST family member 1 23085 0 4.7 5.1
0.3
3.2
1.7
0.4
3.8
-0.0
0.9
0.4
3.1
0.5
0.3
0.3
2.4
2.1
3.1
0.6
2.4
1.0
1.1
0.8
1.8
1.3
0.9
0.2
-1.3
0.8
3.1
2.7
-0.3
1.9
-0.3
1.4
0.1
2.6
2.2
0.5
-0.2
0.1
0.8
4.1
2.2
14 CNTROB centrobin, centriole duplication and spindle assembly protein 116840 0 4.7 3.9
1.7
4.4
-0.4
1.8
3.6
0.6
-0.2
2.5
0.0
1.1
0.0
-0.0
0.4
1.8
2.2
0.4


1.2
-0.6
0.5
-0.1
5.7


15 SUPT6H SPT6 homolog, histone chaperone and transcription elongation factor 6830 0 4.6 4.7
3.1
3.4
0.6
7.5
8.2
2.7
0.7
3.2
6.0
1.4
1.3
3.2
4.1
-0.5
2.5
4.5
2.7
5.5
2.2
1.8
5.5
11.2
-1.1
6.4
9.6
16 NUMA1 nuclear mitotic apparatus protein 1 4926 0 4.6 2.9
1.3
5.2
-0.9
5.1
6.3
1.9
-0.4
3.1
4.2
0.5
1.9
2.5
6.8
0.0
4.7
4.7
0.5
1.9
-0.1
-0.7
2.5




17 THRA thyroid hormone receptor alpha 7067 0 4.6 4.4
0.8
3.7
0.5
-0.1
1.3
-0.5
0.5
-0.8
2.9
-0.9
0.1
-0.8
3.5
0.2
1.6
-0.3
1.6
0.1
1.2
0.6
2.4
-0.3
2.0
0.6
-0.4
-0.6
2.1
-0.6
0.9
-0.5
1.1
-0.3
-0.2
-0.9
1.6
0.6
0.7
0.1
-0.4
-0.6




18 TLE5 TLE family member 5, transcriptional modulator 166 0 4.6 3.6
2.4
4.4
0.1
-0.5
0.7
3.4
-0.2
3.6
0.1
-0.0
-0.9
0.2
0.2
-0.1
2.1
-0.3
0.4
-0.0
2.5
0.2
1.8
-0.2
0.7
-0.8




19 PI4KA phosphatidylinositol 4-kinase alpha 5297 0 4.4 5.0
1.8
2.7
-0.0
2.3
2.2
2.2
1.3
3.1
3.8
1.6
1.6
2.4
1.4
-0.2
2.5
4.0
-0.2
-0.0
2.2
0.7
1.5
1.2
1.7
-0.1
2.5
0.0
1.7
3.8
20 ITPKB inositol-trisphosphate 3-kinase B 3707 0 4.4 4.1
1.8
3.6
-0.9
1.1
1.7
3.7
-0.7






2.6
2.4
-0.8
0.5
0.1
0.6
-0.1
-0.3




21 CUL9 cullin 9 23113 0 4.4 3.9
1.9
3.8
-0.3
1.5
1.4
2.1
0.1
2.5
1.0
0.6
0.3
-0.4
-0.0
-0.3
2.5
1.0
3.3
2.4
1.2
-0.0
2.0
-0.3
3.3




22 PHF2 PHD finger protein 2 5253 0 4.4 4.0
1.6
3.6
0.2
1.5
1.3
1.6
-1.0
2.4
2.5
0.0
1.6
2.6
4.1
2.4
3.1
0.5
3.1
2.7
2.5
1.3
4.2




23 DCTN1 dynactin subunit 1 1639 0 4.4 3.3
2.6
4.4
0.9
5.8
3.0
1.7
1.7
2.5
2.7
1.5
1.7
1.8
1.1
-0.0
4.8
2.4
3.3
2.4
0.8
0.1
0.9
-0.2
2.5
-0.4
4.9
0.2
3.2
8.0
24 VPS53 VPS53 subunit of GARP complex 55275 0 4.4 3.9
1.1
3.7
0.2
2.0
1.0
1.8
1.4
1.2
2.1
-0.4
-0.2
1.1
1.1
1.3
3.4
2.2
1.7
1.3
-0.7
0.4
0.1
-0.0
-0.4
1.2
2.5
25 TCF25 transcription factor 25 22980 0 4.3 4.0
1.3
3.7
-0.3
3.7
2.9
2.3
0.8
2.2
3.9
0.8
0.6
2.6
0.6
-0.5
3.0
0.7
0.1
1.2
1.0
1.7
1.2
0.3
-1.7
0.9
3.3
26 ZZEF1 zinc finger ZZ-type and EF-hand domain containing 1 23140 0 4.3 5.4
2.2
2.2
0.5
1.8
2.3
1.6
0.1
3.1
1.4
-0.4
1.0
0.7
0.8
-0.2
2.6
2.8
0.5
2.3
-0.0
0.5
1.2




27 MBTPS1 membrane bound transcription factor peptidase, site 1 8720 0 4.3 3.5
1.4
4.1
-0.1
1.3
1.6
1.7
-0.2
1.1
1.5
-1.0
-1.2
0.9
2.5
-0.2
4.3
1.1
-1.5
-0.0
-0.7
-1.4
2.3
-1.4
0.7


28 KDM6B lysine demethylase 6B 23135 0 4.3 3.6
2.8
3.9
-0.9
-1.0
2.3
0.2
3.6
1.1
1.9
-0.8
-0.7
-0.8
2.6
-0.0
4.7
1.1
0.2
-0.2
0.2
-0.5
2.0
-0.2
3.6
0.5
-0.1
-0.7
1.8
-0.2
1.3
0.3
1.2
0.9
1.8
0.7
2.7
0.6
2.1
-0.5
4.4
3.6
1.1
-0.9
7.7
5.0
4.4
1.4
29 ZNF827 zinc finger protein 827 152485 0 4.3 4.2
1.8
3.3
-0.3
2.5
1.9
5.0
0.1
3.3
1.3
0.4
0.9
1.9
2.2
0.1
3.2
2.3
-0.7
1.7
3.0
0.5
0.9




30 GOLGA3 golgin A3 2802 0 4.3 4.4
0.9
3.1
1.2
2.0
1.5
2.5
0.9
0.3
1.2
1.2
1.8
1.2
0.1
0.2
0.3
2.8
1.8
0.9
0.1
0.6
1.3




31 EVL Enah/Vasp-like 51466 0 4.2 4.0
2.3
3.3
0.2
-0.0
3.1
0.2
2.0
0.7
5.6
0.2
0.2
-0.4
3.3
0.6
1.4
0.9
1.0
-0.4
0.6
0.2
4.6
0.8
1.0
0.1
0.2
-1.1
1.8
0.9
0.6
0.1
0.8
-1.0
0.7
0.5
0.9
0.8
0.5
-0.0
2.5
0.5
4.1
0.2


32 GNAS GNAS complex locus 2778 0 4.2 3.5
1.2
3.9
0.4
1.8
2.0
-1.0
2.5
0.7
1.4
0.1
1.1
-0.1
1.8
-0.6
0.7
0.2
0.7
-0.1
3.1
-1.0
3.0
-0.5
0.9
0.3
-0.0
-1.1
1.5
1.5
0.2
-0.4
1.5
1.3
-0.3
-1.3
2.0
0.1
33 GTF2I general transcription factor IIi 2969 0 4.2 4.6
-0.2
2.7
-0.4
5.8
1.7
0.8
-1.2
2.8
3.2
0.1
-0.4
3.7
3.6
0.5
3.0
4.0
-1.3
3.4







34 ADAMTS10 ADAM metallopeptidase with thrombospondin type 1 motif 10 81794 0 4.1 3.0
0.8
4.3
1.0
-0.5
0.1
-0.2
3.6
3.3
0.3
-0.3
3.1
2.2
0.6
-0.1
-0.4
-1.6
-1.0
2.3
0.0
1.5
0.6
2.1
0.1
-0.2
-0.2
0.6
0.6
0.7
0.6
1.8
0.0
0.1




35 ZMYND11 zinc finger MYND-type containing 11 10771 0 4.1 4.4
0.6
2.8
0.5
1.0
0.5
1.4
-1.0
3.3
1.4
-0.4
-0.2
1.0
4.4
-1.4
1.9
1.0
0.2
1.0



0.3
-0.2
2.6
-0.6
1.4
-0.3
36 HP1BP3 heterochromatin protein 1 binding protein 3 50809 0 4.1 4.6
0.5
2.6
0.6
1.3
3.0
2.0
-0.1
2.6
1.1
-0.0
1.0
3.3
4.0
-1.0
1.5
1.2
1.3
1.9
1.7
0.3
4.1




37 PIP4K2B phosphatidylinositol-5-phosphate 4-kinase type 2 beta 8396 0 4.1 3.5
0.7
3.7
0.3
0.1
1.9
0.9
1.7
1.5
5.0
1.7
0.7
0.7
2.7
1.0
1.9
-0.3
1.0
-0.2
1.0
-0.3
1.7
0.9
0.4
0.0
1.6
0.5
2.9
1.5
1.0
0.9
3.2
1.7
1.7
0.9
2.3
1.2
2.8
0.0
1.8
-0.0
-1.1
0.2
-0.6
0.3
38 EML3 EMAP like 3 256364 0 4.1 2.6
2.1
4.6
0.6
0.5
2.8
2.5
3.5
1.5
3.0
0.8
0.4
-0.6
0.9
0.8
2.2
1.4
1.3
0.3
0.4
-0.6
1.2
0.4
2.6
2.2
0.3
-0.2
2.0
1.2
4.0
0.9
0.7
0.5
2.6
1.3
1.0
0.8
0.1
-0.2
2.0
1.9
0.0
0.9
-0.2
0.0
39 CA11 carbonic anhydrase 11 770 0 4.1 3.5
0.9
3.6
3.1
1.4
1.4
-1.1
0.0
-1.0
4.6
0.6
1.8
0.0
1.6
-0.5
0.9
-0.5
1.8
1.5
0.5
-0.6
1.7
-1.2
0.6
-1.2
-0.5
-1.1
1.6
-0.5
0.8
-0.4
0.3
-0.7
0.8
-0.4
1.8
0.8
-1.2
-1.3
-0.4
-0.7
0.5
-1.4
0.6
-0.7
0.2
-0.2
40 SPTAN1 spectrin alpha, non-erythrocytic 1 6709 0 4.1 3.4
2.2
3.7
0.9
0.8
4.9
-0.4
6.0
-1.0
4.2
-0.6
0.8
-0.2
3.5
-0.7
3.2
0.2
0.5
-0.7
3.0
-0.4
2.6
-0.6
2.3
0.1
1.0
0.4
3.2
-0.3
2.5
0.6
3.1
5.0
1.6
-0.0
2.5
6.6
-0.4
7.1
4.4
41 TCF20 transcription factor 20 6942 0 4.0 4.1
0.5
3.0
-0.1
4.3
2.7
5.4
0.7
3.3
4.9
2.1
1.3
2.7
1.8
2.1
2.0
2.8
2.4
3.5
2.0
0.7
1.3
-0.5
2.7
0.6
1.0
1.4


42 PRPF8 pre-mRNA processing factor 8 10594 0 4.0 3.7
2.7
3.3
-0.0
6.7
7.1
1.0
-0.4
2.4
3.9
1.0
0.6
1.6
3.6
-0.4
2.4
5.0
-2.0
5.2
0.7
0.2
3.0
10.6
0.1
5.8
10.4
43 MED12 mediator complex subunit 12 9968 0 4.0 3.7
2.6
3.3
1.7
-1.3
6.1
0.2
5.4
-0.3
2.1
-0.0
0.7
0.2
2.6
-0.9
3.5
0.3
0.7
-0.3
2.1
0.2
1.0
-0.4
3.4
0.8
0.9
0.4
4.9
0.6
3.7
-0.3
1.9
1.0
4.9
0.7
0.2
0.1
4.8
3.5
0.3
8.3
6.0
44 ARHGAP35 Rho GTPase activating protein 35 2909 0 4.0 4.2
0.8
2.8
0.5
-0.4
2.6
0.3
1.9
0.7
4.3
0.1
0.1
-0.4
4.1
0.7
2.1
1.3
1.2
-0.2
1.0
0.6
2.2
0.3
3.2
3.1
-0.0
-0.6
2.9
0.7
4.4
1.7
1.3
-1.1
1.7
1.0
1.7
0.8
2.7
1.0
6.6
3.3
5.4
-1.1
0.6
1.6
45 MSL1 MSL complex subunit 1 339287 0 4.0 4.0
1.2
3.0
-0.4
2.0
1.0
1.3
-0.0
3.1
1.3
-0.4
0.5
3.7
2.7
0.1
2.4
0.5
2.0
0.9
-0.7
-0.8
0.5




46 TTC3 tetratricopeptide repeat domain 3 7267 0 4.0 4.6
0.8
2.4
-0.6
0.7
0.8
4.5
0.7
4.1
3.0
0.7
0.7
2.1
2.7
-0.5
2.0
2.3
0.0
1.8
0.4
-1.1
0.4




47 CEP250 centrosomal protein 250 11190 0 4.0 4.4
1.5
2.6
0.1
2.7
3.1
1.7
0.3
2.5
1.9
0.3
0.7
3.3
2.2
0.0
2.9
2.4
3.0
2.5
4.0
-0.5
2.1
4.4
3.3
-0.6
0.7
1.9
2.4
48 OBSCN obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF 84033 0 3.9 4.0
1.6
2.9
0.1
-0.5
1.4
1.3
0.1
-0.2
0.1
1.2



2.5
0.2
-0.5
0.8
0.5
0.2
0.6
1.3




49 NSD3 nuclear receptor binding SET domain protein 3 54904 0 3.9 4.3
0.7
2.7
-1.1
1.9
2.7
2.0
2.8
2.0
1.1
-0.2
2.2
1.2
1.4
1.3
-0.1
-0.1
2.5
0.9
0.9
0.1
-0.3
-0.5
1.1
-1.3
2.7
-0.1
3.5
2.4
0.2
-2.3
2.9
0.9
-0.1
-0.4
1.0
0.7
3.4
0.8
2.6
3.1


50 DGKA diacylglycerol kinase alpha 1606 0 3.9 3.3
2.4
3.6
0.7
0.6
-0.1
-0.2
0.0
-0.0
3.4
1.1
2.0
1.1
2.5
-0.4
0.3
0.1
1.7
0.9
0.2
-0.5
2.4
0.6
0.3
-0.4
0.1
-0.6
1.9
0.2
0.6
-1.4
1.3
0.7
1.0
0.2
0.7
0.5
0.2
-0.2
0.4
0.2
-0.3
0.1
-0.2
-0.8
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