[←][→] hsa  COL27A1 Gene
functional annotation
Function   collagen type XXVII alpha 1 chain  
GO BP
GO:0003431 [list] [network] growth plate cartilage chondrocyte development  (5 genes)  IEA  
GO:0030199 [list] [network] collagen fibril organization  (101 genes)  TAS  
GO:0030198 [list] [network] extracellular matrix organization  (379 genes)  IBA  
GO CC
GO:0005583 [list] [network] fibrillar collagen trimer  (12 genes)  IEA  
GO:0005788 [list] [network] endoplasmic reticulum lumen  (313 genes)  TAS  
GO:0062023 [list] [network] collagen-containing extracellular matrix  (426 genes)  HDA  
GO:0031012 [list] [network] extracellular matrix  (570 genes)  IBA  
GO:0005615 [list] [network] extracellular space  (3622 genes)  IBA  
GO:0005576 [list] [network] extracellular region  (4632 genes)  TAS  
GO MF
GO:0030020 [list] [network] extracellular matrix structural constituent conferring tensile strength  (41 genes)  HDA  
GO:0005201 [list] [network] extracellular matrix structural constituent  (172 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (4237 genes)  IEA  
KEGG hsa04974 [list] [network] Protein digestion and absorption (103 genes)
Protein NP_116277.2  XP_006717371.1  XP_006717373.1  XP_011517440.1  XP_011517442.1  XP_011517444.1  XP_011517445.1  XP_011517446.1  XP_011517447.1  XP_016870728.1 
BLAST NP_116277.2  XP_006717371.1  XP_006717373.1  XP_011517440.1  XP_011517442.1  XP_011517444.1  XP_011517445.1  XP_011517446.1  XP_011517447.1  XP_016870728.1 
Orthologous [Ortholog page] Col27a1 (rno)  Col27a1 (mmu)  COL27A1 (gga)  COL27A1 (cfa)  col27a1b (dre)  COL27A1 (mcc)  COL27A1 (fca) 
Subcellular
localization
wolf
extr 3,  mito 2,  plas 1,  cyto 1,  mito_pero 1,  cyto_plas 1  (predict for NP_116277.2)
extr 3,  mito 2,  plas 1,  cyto 1,  mito_pero 1,  cyto_plas 1  (predict for XP_006717371.1)
cyto_nucl 5,  cyto 5,  nucl 3,  mito 1  (predict for XP_006717373.1)
extr 3,  plas 2,  cyto_pero 2,  pero 2,  mito_pero 2,  cyto 1,  E.R._mito 1,  E.R. 1  (predict for XP_011517440.1)
extr 3,  mito 2,  plas 1,  cyto 1,  mito_pero 1,  cyto_plas 1  (predict for XP_011517442.1)
extr 4,  plas 2,  mito 2,  cyto 1,  nucl 1,  lyso 1  (predict for XP_011517444.1)
extr 4,  plas 2,  mito 2,  cyto 1,  nucl 1,  lyso 1  (predict for XP_011517445.1)
extr 4,  plas 2,  mito 2,  cyto_plas 2,  cyto 1  (predict for XP_011517446.1)
nucl 5,  cyto_nucl 5,  cyto 4  (predict for XP_011517447.1)
extr 3,  plas 2,  mito 2,  cyto_plas 2,  cyto 1  (predict for XP_016870728.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hsa04974 Protein digestion and absorption 7
hsa04950 Maturity onset diabetes of the young 2
hsa04151 PI3K-Akt signaling pathway 2
Genes directly connected with COL27A1 on the network
coex z* Locus Function* Coexpression
detail		 CoexPub Entrez Gene ID*
8.1 COL7A1 collagen type VII alpha 1 chain [detail] 4 1294
7.4 COL16A1 collagen type XVI alpha 1 chain [detail] 0 1307
6.0 KIF12 kinesin family member 12 [detail] 0 113220
5.0 COL13A1 collagen type XIII alpha 1 chain [detail] 0 1305
4.6 MPP3 membrane palmitoylated protein 3 [detail] 0 4356
4.1 SORCS2 sortilin related VPS10 domain containing receptor 2 [detail] 0 57537
Coexpressed
gene list		 [Coexpressed gene list for COL27A1]
Gene expression
All samples [Expression pattern for all samples]
Tissue specificity* tissue specificity
Link to other DBs
Entrez Gene ID 85301      
Refseq ID (protein) NP_116277.2 
XP_006717371.1 
XP_006717373.1 
XP_011517440.1 
XP_011517442.1 
XP_011517444.1 
XP_011517445.1 
XP_011517446.1 
XP_011517447.1 
XP_016870728.1 


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