| functional annotation |
| Function |
collagen type XVIII alpha 1 chain |
|
| GO BP |
|
GO:0051599 [list] [network] response to hydrostatic pressure
|
(6 genes)
|
IEA
|
 |
|
GO:0001886 [list] [network] endothelial cell morphogenesis
|
(13 genes)
|
IBA
|
|
|
GO:0030199 [list] [network] collagen fibril organization
|
(101 genes)
|
TAS
|
|
|
GO:0007601 [list] [network] visual perception
|
(215 genes)
|
TAS
|
|
|
GO:0001525 [list] [network] angiogenesis
|
(316 genes)
|
IBA
|
|
|
GO:0030198 [list] [network] extracellular matrix organization
|
(379 genes)
|
IBA
TAS
|
|
|
GO:0042493 [list] [network] response to drug
|
(385 genes)
|
IEA
|
|
|
GO:0008285 [list] [network] negative regulation of cell population proliferation
|
(778 genes)
|
TAS
|
|
|
GO:0007155 [list] [network] cell adhesion
|
(942 genes)
|
IEA
|
|
|
GO:0009887 [list] [network] animal organ morphogenesis
|
(947 genes)
|
TAS
|
|
|
| GO CC |
|
GO:0005581 [list] [network] collagen trimer
|
(87 genes)
|
IEA
|
|
|
GO:0005604 [list] [network] basement membrane
|
(96 genes)
|
IEA
|
|
|
GO:0005788 [list] [network] endoplasmic reticulum lumen
|
(313 genes)
|
TAS
|
|
|
GO:0062023 [list] [network] collagen-containing extracellular matrix
|
(426 genes)
|
HDA
TAS
|
|
|
GO:0031012 [list] [network] extracellular matrix
|
(570 genes)
|
IBA
|
|
|
GO:0070062 [list] [network] extracellular exosome
|
(2212 genes)
|
HDA
|
|
|
GO:0005615 [list] [network] extracellular space
|
(3622 genes)
|
HDA
IBA
|
|
|
GO:0005576 [list] [network] extracellular region
|
(4632 genes)
|
HDA
TAS
|
|
|
| GO MF |
|
GO:0030020 [list] [network] extracellular matrix structural constituent conferring tensile strength
|
(41 genes)
|
RCA
|
|
|
GO:0005201 [list] [network] extracellular matrix structural constituent
|
(172 genes)
|
IBA
|
|
|
GO:0046872 [list] [network] metal ion binding
|
(4237 genes)
|
IEA
|
|
|
| KEGG |
hsa04974 [list] [network] Protein digestion and absorption (103 genes) |
 |
| Protein |
NP_001366429.1
NP_085059.2
NP_569711.2
|
| BLAST |
NP_001366429.1
NP_085059.2
NP_569711.2
|
| Orthologous |
[Ortholog page]
Col18a1 (mmu)
Col18a1 (rno)
COL18A1 (gga)
col18a1a (dre)
COL18A1 (mcc)
col18a1b (dre)
COL18A1 (cfa)
COL18A1 (fca)
|
Subcellular
localization
wolf |
|
E.R._golg 3,
E.R. 3,
golg 3,
extr 2,
lyso 2
|
(predict for NP_001366429.1)
|
|
extr 7,
lyso 3
|
(predict for NP_085059.2)
|
|
extr 7,
E.R. 1,
lyso 1,
E.R._mito 1
|
(predict for NP_569711.2)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| hsa04512 |
ECM-receptor interaction |
7 |
 |
| hsa05165 |
Human papillomavirus infection |
6 |
 |
| hsa04151 |
PI3K-Akt signaling pathway |
5 |
 |
| hsa04510 |
Focal adhesion |
5 |
 |
| hsa04974 |
Protein digestion and absorption |
5 |
 |
Genes directly connected with COL18A1 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
CoexPub |
Entrez Gene ID* |
| 6.8 |
COL4A1 |
collagen type IV alpha 1 chain |
[detail] |
18 |
1282 |
| 6.7 |
COL4A2 |
collagen type IV alpha 2 chain |
[detail] |
29 |
1284 |
| 6.6 |
LAMA5 |
laminin subunit alpha 5 |
[detail] |
0 |
3911 |
| 5.4 |
MEGF6 |
multiple EGF like domains 6 |
[detail] |
0 |
1953 |
|
Coexpressed
gene list |
[Coexpressed gene list for COL18A1]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
| Tissue specificity* |
|
COL18A1 Gene
