[←][→] dre  col11a2 Gene
functional annotation
Function   collagen, type XI, alpha 2  
GO BP
GO:0030199 [list] [network] collagen fibril organization  (26 genes)  IBA  
GO:0060536 [list] [network] cartilage morphogenesis  (27 genes)  IMP  
GO:0007605 [list] [network] sensory perception of sound  (54 genes)  IBA  
GO:0051216 [list] [network] cartilage development  (139 genes)  IBA IMP  
GO:0030198 [list] [network] extracellular matrix organization  (169 genes)  IBA  
GO CC
GO:0005581 [list] [network] collagen trimer  (60 genes)  IBA IEA  
GO:0031012 [list] [network] extracellular matrix  (324 genes)  IBA  
GO:0005615 [list] [network] extracellular space  (926 genes)  IBA  
GO:0005576 [list] [network] extracellular region  (1413 genes)  IEA  
GO MF
GO:0005201 [list] [network] extracellular matrix structural constituent  (93 genes)  IBA IEA  
KEGG
Protein NP_001073461.2  NP_001315194.1  XP_005159499.1  XP_005159500.1  XP_005159502.1  XP_005159505.1  XP_005159507.1  XP_009292324.1  XP_017207741.1  XP_017207742.1 
BLAST NP_001073461.2  NP_001315194.1  XP_005159499.1  XP_005159500.1  XP_005159502.1  XP_005159505.1  XP_005159507.1  XP_009292324.1  XP_017207741.1  XP_017207742.1 
Orthologous [Ortholog page] COL1A1 (hsa)  COL1A2 (hsa)  COL2A1 (hsa)  COL3A1 (hsa)  Col2a1 (mmu)  Col3a1 (mmu)  Col1a1 (mmu)  Col1a2 (mmu)  Col2a1 (rno)  Col1a1 (rno)  Col3a1 (rno)  Col1a2 (rno)  col1a1b (dre)  col1a2 (dre)  col1a1a (dre)  COL2A1 (gga)  COL1A1 (gga)  COL1A2 (gga)  COL3A1 (gga)  COL1A1 (cfa)  COL1A2 (cfa)  COL2A1 (cfa)  COL3A1 (cfa)  col2a1b (dre)  col2a1a (dre)  COL3A1 (mcc)  COL1A1 (mcc)  COL1A2 (mcc)  COL2A1 (mcc)  eno101 (spo)  eno102 (spo)  col5a2b (dre)  col5a3a (dre)  col5a3b (dre)  COL2A1 (fca)  COL1A2 (fca)  COL1A1 (fca)  COL3A1 (fca) 
Subcellular
localization
wolf
extr 4,  E.R. 2,  lyso 2,  pero 1,  nucl 1,  golg 1,  mito_pero 1  (predict for NP_001073461.2)
extr 4,  E.R. 2,  lyso 2,  pero 1,  golg 1,  mito_pero 1  (predict for NP_001315194.1)
extr 5,  E.R. 2,  lyso 1,  nucl 1,  pero 1  (predict for XP_005159499.1)
extr 5,  E.R. 2,  lyso 1,  nucl 1,  pero 1  (predict for XP_005159500.1)
extr 5,  E.R. 2,  lyso 1,  nucl 1,  pero 1  (predict for XP_005159502.1)
extr 4,  E.R. 2,  lyso 2,  pero 1,  golg 1,  mito_pero 1  (predict for XP_005159505.1)
extr 4,  E.R. 2,  lyso 2,  pero 1,  golg 1,  mito_pero 1  (predict for XP_005159507.1)
extr 4,  E.R. 2,  lyso 2,  pero 1,  nucl 1,  golg 1,  mito_pero 1  (predict for XP_009292324.1)
extr 5,  E.R. 2,  lyso 1,  pero 1  (predict for XP_017207741.1)
extr 4,  E.R. 2,  lyso 2,  pero 1,  golg 1,  mito_pero 1  (predict for XP_017207742.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
dre04510 Focal adhesion 5
dre04512 ECM-receptor interaction 5
dre04810 Regulation of actin cytoskeleton 2
Genes directly connected with col11a2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.1 snorc secondary ossification center associated regulator of chondrocyte maturation [detail] 561751
8.7 epyc epiphycan [detail] 550602
8.4 ucmab upper zone of growth plate and cartilage matrix associated b [detail] 405870
6.3 col27a1a collagen, type XXVII, alpha 1a [detail] 100004688
4.9 itga10 integrin, alpha 10 [detail] 572348
4.9 si:dkey-32e6.6 si:dkey-32e6.6 [detail] 561688
4.5 ccn1l1 cellular communication network factor 1, like 1 [detail] 550346
Coexpressed
gene list		 [Coexpressed gene list for col11a2]
Gene expression
All samples [Expression pattern for all samples]
Tissue specificity*
Link to other DBs
Entrez Gene ID 561679      
Refseq ID (protein) NP_001073461.2 
NP_001315194.1 
XP_005159499.1 
XP_005159500.1 
XP_005159502.1 
XP_005159505.1 
XP_005159507.1 
XP_009292324.1 
XP_017207741.1 
XP_017207742.1 


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