| functional annotation |
| Function |
pre-mRNA processing factor 38A |
|
| GO BP |
|
GO:0000398 [list] [network] mRNA splicing, via spliceosome
|
(168 genes)
|
IEA
ISS
|
 |
|
GO:0008380 [list] [network] RNA splicing
|
(237 genes)
|
IEA
|
|
|
GO:0006397 [list] [network] mRNA processing
|
(309 genes)
|
IEA
|
|
|
| GO CC |
|
GO:0071005 [list] [network] U2-type precatalytic spliceosome
|
(7 genes)
|
IEA
ISS
|
|
|
GO:0071011 [list] [network] precatalytic spliceosome
|
(22 genes)
|
IBA
|
|
|
GO:0005681 [list] [network] spliceosomal complex
|
(133 genes)
|
IEA
|
|
|
GO:0005634 [list] [network] nucleus
|
(4679 genes)
|
IEA
ISS
|
|
|
| GO MF |
|
| KEGG |
dre03040 [list] [network] Spliceosome (143 genes) |
 |
| Protein |
NP_001003483.1
|
| BLAST |
NP_001003483.1
|
| Orthologous |
[Ortholog page]
Prp38 (dme)
PRPF38A (hsa)
prp-38 (cel)
Prpf38a (mmu)
Prpf38a (rno)
PRPF38A (cfa)
PRPF38A (mcc)
PRPF38A (gga)
PRPF38A (fca)
|
Subcellular
localization
wolf |
|
nucl 9,
cyto 1
|
(predict for NP_001003483.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| dre03040 |
Spliceosome |
10 |
 |
| dre03013 |
Nucleocytoplasmic transport |
3 |
 |
| dre03015 |
mRNA surveillance pathway |
2 |
 |
| dre03022 |
Basal transcription factors |
2 |
 |
Genes directly connected with prpf38a on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 6.9 |
thoc7 |
THO complex 7 |
[detail] |
445035 |
| 6.4 |
znf576.2 |
zinc finger protein 576, tandem duplicate 2 |
[detail] |
563587 |
| 6.3 |
sap18 |
Sin3A-associated protein |
[detail] |
393693 |
|
Coexpressed
gene list |
[Coexpressed gene list for prpf38a]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
| Tissue specificity* |
|
prpf38a Gene
