[][] dre  smarca2 Gene
functional annotation
Function   SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
GO BP
GO:0031507 [list] [network] heterochromatin assembly  (9 genes)  IMP  
GO:0043044 [list] [network] ATP-dependent chromatin remodeling  (41 genes)  IBA  
GO:0006338 [list] [network] chromatin remodeling  (90 genes)  IEA  
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (312 genes)  IBA  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (2255 genes)  IEA  
GO CC
GO:0016514 [list] [network] SWI/SNF complex  (21 genes)  IEA  
GO:0005634 [list] [network] nucleus  (4679 genes)  IBA IEA  
GO MF
GO:0008094 [list] [network] ATPase, acting on DNA  (88 genes)  IBA  
GO:0042393 [list] [network] histone binding  (130 genes)  IEA  
GO:0004386 [list] [network] helicase activity  (134 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1578 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2079 genes)  IBA  
GO:0016787 [list] [network] hydrolase activity  (2222 genes)  IEA  
GO:0000166 [list] [network] nucleotide binding  (2320 genes)  IEA  
KEGG
Protein NP_001038240.1  XP_009299900.1 
BLAST NP_001038240.1  XP_009299900.1 
Orthologous [Ortholog page] SMARCA2 (hsa)SMARCA4 (hsa)Smarca4 (mmu)brm (dme)Smarca2 (mmu)Smarca4 (rno)swsn-4 (cel)pqn-15 (cel)smarca4a (dre)Smarca2 (rno)SMARCA4 (gga)SMARCA2 (gga)SMARCA2 (cfa)SMARCA4 (cfa)SMARCA2 (mcc)SMARCA4 (mcc)SNF2 (sce)STH1 (sce)LOC100535713 (dre)SMARCA2 (fca)SMARCA4 (fca)
Subcellular
localization
wolf
nucl 9  (predict for NP_001038240.1)
nucl 9  (predict for XP_009299900.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
dre04621 NOD-like receptor signaling pathway 2
Genes directly connected with smarca2 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
8.7 smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [detail] 559803
6.5 si:dkey-17m8.1 si:dkey-17m8.1 [detail] 796618
5.8 fkbp4 FKBP prolyl isomerase 4 [detail] 321795
5.0 chd3 chromodomain helicase DNA binding protein 3 [detail] 568230
Coexpressed
gene list
[Coexpressed gene list for smarca2]
Gene expression
All samples [Expression pattern for all samples]
Tissue specificity*
Link to other DBs
Entrez Gene ID 334032    
Refseq ID (protein) NP_001038240.1 
XP_009299900.1 


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