[←][→] rno  Lima1 Gene
functional annotation
Function   LIM domain and actin binding 1  
GO BP
GO:0030299 [list] [network] intestinal cholesterol absorption  (5 genes)  ISO  
GO:0031529 [list] [network] ruffle organization  (28 genes)  ISO ISS  
GO:0030835 [list] [network] negative regulation of actin filament depolymerization  (42 genes)  ISO ISS  
GO:0051017 [list] [network] actin filament bundle assembly  (66 genes)  IBA ISO ISS  
GO:0042632 [list] [network] cholesterol homeostasis  (91 genes)  ISO  
GO:0008203 [list] [network] cholesterol metabolic process  (113 genes)  IEA  
GO:0016477 [list] [network] cell migration  (885 genes)  ISO ISS  
GO CC
GO:0032154 [list] [network] cleavage furrow  (50 genes)  ISO  
GO:0031526 [list] [network] brush border membrane  (76 genes)  ISO  
GO:0001725 [list] [network] stress fiber  (84 genes)  ISO  
GO:0005903 [list] [network] brush border  (138 genes)  ISO  
GO:0001726 [list] [network] ruffle  (174 genes)  ISO ISS  
GO:0005925 [list] [network] focal adhesion  (188 genes)  ISO ISS  
GO:0015629 [list] [network] actin cytoskeleton  (494 genes)  IBA ISO  
GO:0005829 [list] [network] cytosol  (3690 genes)  IEA ISO  
GO:0005886 [list] [network] plasma membrane  (5814 genes)  IBA ISO  
GO MF
GO:0003785 [list] [network] actin monomer binding  (26 genes)  ISO  
GO:0051015 [list] [network] actin filament binding  (207 genes)  IBA ISO  
GO:0046872 [list] [network] metal ion binding  (3303 genes)  IEA  
KEGG
Protein NP_001178544.1  XP_006257416.1  XP_006257417.1 
BLAST NP_001178544.1  XP_006257416.1  XP_006257417.1 
Orthologous [Ortholog page] LIMA1 (hsa)  lima1a (dre)  Lima1 (mmu)  Limd2 (mmu)  LIMD2 (hsa)  tag-273 (cel)  Limd2 (rno)  LIMD2 (gga)  LIMA1 (gga)  LIMA1 (cfa)  limd2 (dre)  LIMD2 (cfa)  LIMA1 (mcc)  LIMD2 (mcc)  XIRP2 (gga)  LIMA1 (fca)  LIMD2 (fca)  lima1b (dre) 
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_001178544.1)
nucl 10,  cyto_nucl 5  (predict for XP_006257416.1)
nucl 9,  cyto_nucl 5  (predict for XP_006257417.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
rno04520 Adherens junction 2
rno04916 Melanogenesis 2
rno04934 Cushing syndrome 2
rno05165 Human papillomavirus infection 2
rno05200 Pathways in cancer 2
Genes directly connected with Lima1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.0 Tram2 translocation associated membrane protein 2 [detail] 100361830
4.0 Kank2 KN motif and ankyrin repeat domains 2 [detail] 100361376
3.9 LOC102554669 uncharacterized LOC102554669 [detail] 102554669
Coexpressed
gene list		 [Coexpressed gene list for Lima1]
Gene expression
All samples [Expression pattern for all samples]
Tissue specificity*
Link to other DBs
Entrez Gene ID 300228      
Refseq ID (protein) NP_001178544.1 
XP_006257416.1 
XP_006257417.1 


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