[←][→] spo  raf1 Gene
functional annotation
Function   Rik1-associated factor Raf1  
GO BP
GO:0031509 [list] [network] subtelomeric heterochromatin assembly  (8 genes)  IMP  
GO:1903097 [list] [network] regulation of CENP-A containing nucleosome assembly  (9 genes)  IMP  
GO:0045141 [list] [network] meiotic telomere clustering  (12 genes)  IMP  
GO:0030466 [list] [network] silent mating-type cassette heterochromatin assembly  (14 genes)  IMP  
GO:0031508 [list] [network] pericentric heterochromatin assembly  (19 genes)  IMP  
GO:0031048 [list] [network] heterochromatin assembly by small RNA  (28 genes)  IMP  
GO:0000122 [list] [network] negative regulation of transcription by RNA polymerase II  (51 genes)  IBA  
GO:0034613 [list] [network] cellular protein localization  (511 genes)  IMP  
GO CC
GO:0017053 [list] [network] transcription repressor complex  (6 genes)  IBA  
GO:0043494 [list] [network] CLRC complex  (6 genes)  IDA  
GO:0031934 [list] [network] mating-type region heterochromatin  (30 genes)  TAS  
GO:0005721 [list] [network] pericentric heterochromatin  (49 genes)  IDA  
GO:0000785 [list] [network] chromatin  (414 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2316 genes)  HDA  
GO:0005634 [list] [network] nucleus  (2689 genes)  HDA IBA IDA  
GO MF
GO:0005515 [list] [network] protein binding  (1144 genes)  IPI  
KEGG
Protein NP_587700.1 
BLAST NP_587700.1 
Orthologous [Ortholog page] Olr1768 (rno)  OR7R1 (cfa)  LOC720490 (mcc)  LOC101095561 (fca) 
Subcellular
localization
wolf
nucl 5,  cyto_nucl 4,  mito_nucl 3,  cyto 2,  mito 1  (predict for NP_587700.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
spo04111 Cell cycle - yeast 2
spo04113 Meiosis - yeast 2
Genes directly connected with raf1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.4 SPBC16A3.06 putative tRNA specific adenosine deaminase [detail] 2540035
4.6 chp2 chromodomain protein 2 [detail] 2540047
4.6 rad17 RFC-like checkpoint protein Rad17 [detail] 2541643
4.2 SPBC19C7.08c putative AdoMet-dependent tRNA methyltransferase [detail] 2540701
4.1 prp18 putative U5 snRNP-associated protein Prp18 [detail] 2539357
3.9 bir1 survivin Bir1 [detail] 2538875
3.7 sat1 putative protein sat1 [detail] 2540531
Coexpressed
gene list		 [Coexpressed gene list for raf1]
Gene expression
All samples [Expression pattern for all samples]
Tissue specificity*
Link to other DBs
Entrez Gene ID 2538848      
Refseq ID (protein) NP_587700.1 


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