| functional annotation |
| Function |
collagen, type XII, alpha 1 |
|
| GO BP |
|
GO:0035987 [list] [network] endodermal cell differentiation
|
(24 genes)
|
IBA
|
 |
|
GO:0007155 [list] [network] cell adhesion
|
(870 genes)
|
IEA
|
|
|
| GO CC |
|
GO:0005581 [list] [network] collagen trimer
|
(81 genes)
|
IEA
|
|
|
GO:0062023 [list] [network] collagen-containing extracellular matrix
|
(392 genes)
|
HDA
IBA
|
|
|
GO:0005615 [list] [network] extracellular space
|
(2015 genes)
|
HDA
IBA
|
|
|
GO:0005576 [list] [network] extracellular region
|
(2754 genes)
|
IEA
|
|
|
| GO MF |
|
GO:0030020 [list] [network] extracellular matrix structural constituent conferring tensile strength
|
(38 genes)
|
RCA
|
|
|
| KEGG |
mmu04974 [list] [network] Protein digestion and absorption (108 genes) |
 |
| Protein |
NP_001277237.1
XP_006510860.1
XP_006510863.1
|
| BLAST |
NP_001277237.1
XP_006510860.1
XP_006510863.1
|
| Orthologous |
[Ortholog page]
COL12A1 (hsa)
Col12a1 (rno)
COL12A1 (gga)
COL12A1 (cfa)
COL12A1 (mcc)
col12a1a (dre)
COL12A1 (fca)
LOC119881681 (cfa)
|
Subcellular
localization
wolf |
|
extr 5,
E.R. 2,
E.R._golg 2,
pero 1,
golg 1
|
(predict for NP_001277237.1)
|
|
extr 5,
E.R. 2,
E.R._golg 2,
pero 1,
golg 1
|
(predict for XP_006510860.1)
|
|
extr 5,
E.R. 2,
E.R._golg 1,
pero 1,
lyso 1
|
(predict for XP_006510863.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| mmu04974 |
Protein digestion and absorption |
8 |
 |
| mmu04151 |
PI3K-Akt signaling pathway |
6 |
 |
| mmu04510 |
Focal adhesion |
6 |
 |
| mmu04512 |
ECM-receptor interaction |
6 |
 |
| mmu05165 |
Human papillomavirus infection |
6 |
 |
Genes directly connected with Col12a1 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
CoexPub |
Entrez Gene ID* |
| 10.7 |
Tnc |
tenascin C |
[detail] |
6 |
21923 |
| 10.0 |
Lox |
lysyl oxidase |
[detail] |
1 |
16948 |
| 9.5 |
Col5a2 |
collagen, type V, alpha 2 |
[detail] |
7 |
12832 |
| 9.2 |
Col8a1 |
collagen, type VIII, alpha 1 |
[detail] |
9 |
12837 |
| 9.0 |
Ccn4 |
cellular communication network factor 4 |
[detail] |
1 |
22402 |
| 8.9 |
Thbs2 |
thrombospondin 2 |
[detail] |
3 |
21826 |
| 7.0 |
Col16a1 |
collagen, type XVI, alpha 1 |
[detail] |
3 |
107581 |
| 6.8 |
Ltbp2 |
latent transforming growth factor beta binding protein 2 |
[detail] |
0 |
16997 |
| 6.3 |
P4ha3 |
procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide III |
[detail] |
0 |
320452 |
| 6.2 |
Itga11 |
integrin alpha 11 |
[detail] |
0 |
319480 |
| 5.9 |
Tnn |
tenascin N |
[detail] |
0 |
329278 |
| 5.8 |
Cemip |
cell migration inducing protein, hyaluronan binding |
[detail] |
0 |
80982 |
| 5.7 |
Pappa |
pregnancy-associated plasma protein A |
[detail] |
0 |
18491 |
| 5.6 |
Kirrel |
kirre like nephrin family adhesion molecule 1 |
[detail] |
1 |
170643 |
| 5.5 |
Tnfrsf11b |
tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin) |
[detail] |
0 |
18383 |
|
Coexpressed
gene list |
[Coexpressed gene list for Col12a1]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
| Tissue specificity* |
|
Col12a1 Gene
