GO:0008187 poly-pyrimidine tract binding
[list]

Species hsa(Human) mmu(Mouse) rno(Rat) gga(Chicken) dre(Zebrafish) dme(Fly) cel(Nematoda) mcc(Monkey) cfa(Dog) sce(Budding yeast) spo(Fission yeast) fca(Domestic cat)
UMAP
Representative coexpressed gene network LCNgo
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hsa03040 Spliceosome 4
hsa03015 mRNA surveillance pathway 3
hsa03018 RNA degradation 2
LCNgo
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mmu03015 mRNA surveillance pathway 5
mmu03018 RNA degradation 4
mmu03040 Spliceosome 3
LCNgo
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
rno03015 mRNA surveillance pathway 6
rno03018 RNA degradation 4
rno03040 Spliceosome 3
No network available. LCNgo
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
dre03040 Spliceosome 4
LCNgo
LCNgo
No network available. No network available. LCNgo
LCNgo
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
spo00190 Oxidative phosphorylation 2
spo04145 Phagosome 2
spo03018 RNA degradation 2
spo03040 Spliceosome 2
No network available.
Gene list in the network
Symbol Function*
HNRNPC heterogeneous nuclear ribonucleoprotein C
HNRNPD heterogeneous nuclear ribonucleoprotein D
HNRNPK heterogeneous nuclear ribonucleoprotein K
HNRNPL heterogeneous nuclear ribonucleoprotein L
HNRNPU heterogeneous nuclear ribonucleoprotein U
NCL nucleolin
PTBP1 polypyrimidine tract binding protein 1
SFPQ splicing factor proline and glutamine rich
SSB small RNA binding exonuclease protection factor La
PABPC4 poly(A) binding protein cytoplasmic 4
HNRNPR heterogeneous nuclear ribonucleoprotein R
KHDRBS1 KH RNA binding domain containing, signal transduction associated 1
U2AF2 U2 small nuclear RNA auxiliary factor 2
DAZAP1 DAZ associated protein 1
PABPC1 poly(A) binding protein cytoplasmic 1
Symbol Function*
Pabpc1 poly(A) binding protein, cytoplasmic 1
Pabpc2 poly(A) binding protein, cytoplasmic 2
Khdrbs1 KH domain containing, RNA binding, signal transduction associated 1
Sf3a2 splicing factor 3a, subunit 2
U2af2 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2
Hnrnpu heterogeneous nuclear ribonucleoprotein U
Pabpc6 poly(A) binding protein, cytoplasmic 6
Dazap1 DAZ associated protein 1
Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
Pabpc4 poly(A) binding protein, cytoplasmic 4
Fsip2 fibrous sheath-interacting protein 2
Symbol Function*
Ssb small RNA binding exonuclease protection factor La
Cirbp cold inducible RNA binding protein
Khdrbs1 KH RNA binding domain containing, signal transduction associated 1
Hnrnpu heterogeneous nuclear ribonucleoprotein U
Pabpc1 poly(A) binding protein, cytoplasmic 1
Sfpq splicing factor proline and glutamine rich
Pabpc2 poly(A) binding protein, cytoplasmic 2
Pabpc6 poly(A) binding protein, cytoplasmic 6
Pabpc4 poly(A) binding protein, cytoplasmic 4
Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
U2af2 U2 small nuclear RNA auxiliary factor 2
Fus FUS RNA binding protein
Msi2 musashi RNA-binding protein 2
Nipsnap2 nipsnap homolog 2
Symbol Function*
nono non-POU domain containing, octamer-binding
hnrnpub heterogeneous nuclear ribonucleoprotein Ub
u2af2b U2 small nuclear RNA auxiliary factor 2b
rbms2b RNA binding motif, single stranded interacting protein 2b
u2af2a U2 small nuclear RNA auxiliary factor 2a
rbms1a RNA binding motif, single stranded interacting protein 1a
hnrnpua heterogeneous nuclear ribonucleoprotein Ua
Symbol Function*
Hrb27C Heterogeneous nuclear ribonucleoprotein at 27C
sqd squid
Hrb87F Heterogeneous nuclear ribonucleoprotein at 87F
Symbol Function*
mex-6 Zinc finger protein mex-6
mex-5 Zinc finger protein mex-5
pos-1 POsterior Segregation
Symbol Function*
YFL012W uncharacterized protein
PES4 Pes4p
GRS1 glycine--tRNA ligase
PUB1 Pub1p
MIP6 Mip6p
SSP1 Ssp1p
PAB1 polyadenylate-binding protein
Symbol Function*
SPBC119.18 putative protein Mdm35
vma10 putative V-type ATPase V1 domain subunit G
lsm5 putative U6 snRNP-associated protein Lsm5
vma7 putative V-type ATPase V1 subunit F
lsm6 putative U6 snRNP-associated protein Lsm6


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