GO:0031123 RNA 3'-end processing

136 hsa genes in this database.
89 mmu genes in this database.
85 rno genes in this database.
13 gga genes in this database.
63 dre genes in this database.
71 dme genes in this database.
71 cel genes in this database.
74 sce genes in this database.
65 spo genes in this database.

[QuickGO]

term: RNA 3'-end processing
goid: GO:0031123


Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species Symbol Gene
coexpression
Locus
page
Full name* Entrez Gene ID Evidence*
hsa APP amyloid beta precursor protein 351
hsa CSTF1 cleavage stimulation factor subunit 1 1477
hsa CSTF2 cleavage stimulation factor subunit 2 1478
hsa CSTF3 cleavage stimulation factor subunit 3 1479 IBA
hsa DKC1 dyskerin pseudouridine synthase 1 1736
hsa FBL fibrillarin 2091
hsa GRSF1 G-rich RNA sequence binding factor 1 2926
hsa HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 3028
hsa MAGOH mago homolog, exon junction complex subunit 4116
hsa NCBP1 nuclear cap binding protein subunit 1 4686
hsa PARN poly(A)-specific ribonuclease 5073
hsa EXOSC9 exosome component 9 5393
hsa EXOSC10 exosome component 10 5394
hsa POLR2D RNA polymerase II subunit D 5433
hsa RPS21 ribosomal protein S21 6227
hsa SRSF1 serine and arginine rich splicing factor 1 6426
hsa SRSF2 serine and arginine rich splicing factor 2 6427
hsa SRSF3 serine and arginine rich splicing factor 3 6428
hsa SRSF4 serine and arginine rich splicing factor 4 6429
hsa SRSF5 serine and arginine rich splicing factor 5 6430
hsa SRSF6 serine and arginine rich splicing factor 6 6431
hsa SRSF7 serine and arginine rich splicing factor 7 6432
hsa SSB small RNA binding exonuclease protection factor La 6741
hsa SUPV3L1 Suv3 like RNA helicase 6832
hsa U2AF1 U2 small nuclear RNA auxiliary factor 1 7307
hsa SLBP stem-loop binding protein 7884
hsa DDX39B DExD-box helicase 39B 7919
hsa PABPN1 poly(A) binding protein nuclear 1 8106
hsa SYMPK symplekin 8189
hsa THOC5 THO complex 5 8563
hsa SRSF9 serine and arginine rich splicing factor 9 8683
hsa SRSF11 serine and arginine rich splicing factor 11 9295
hsa EIF4A3 eukaryotic translation initiation factor 4A3 9775
hsa DHX38 DEAH-box helicase 38 9785
hsa ZC3H11A zinc finger CCCH-type containing 11A 9877
hsa RBM8A RNA binding motif protein 8A 9939
hsa THOC1 THO complex 1 9984
hsa ALYREF Aly/REF export factor 10189
hsa DDX39A DExD-box helicase 39A 10212
hsa SRRM1 serine and arginine repetitive matrix 1 10250
hsa SLU7 SLU7 homolog, splicing factor 10569
hsa AHCYL1 adenosylhomocysteinase like 1 10768
hsa CPSF4 cleavage and polyadenylation specific factor 4 10898
hsa PAPOLA poly(A) polymerase alpha 10914
hsa RNPS1 RNA binding protein with serine rich domain 1 10921
hsa CLP1 cleavage factor polyribonucleotide kinase subunit 1 10978
hsa TENT4A terminal nucleotidyltransferase 4A 11044 IBA
hsa NUDT21 nudix hydrolase 21 11051
hsa CPSF6 cleavage and polyadenylation specific factor 6 11052
hsa U2AF2 U2 small nuclear RNA auxiliary factor 2 11338
hsa EXOSC8 exosome component 8 11340
hsa CASC3 CASC3 exon junction complex subunit 22794
hsa SCAF8 SR-related CTD associated factor 8 22828
hsa NCBP2 nuclear cap binding protein subunit 2 22916
hsa EXOSC7 exosome component 7 23016
hsa ZC3H3 zinc finger CCCH-type containing 3 23144
hsa RPRD2 regulation of nuclear pre-mRNA domain containing 2 23248
hsa CSTF2T cleavage stimulation factor subunit 2 tau variant 23283
hsa TUT4 terminal uridylyl transferase 4 23318 IBA,IDA
hsa EXOSC2 exosome component 2 23404
hsa ZNF473 zinc finger protein 473 25888
hsa INTS7 integrator complex subunit 7 25896
hsa PTCD1 pentatricopeptide repeat domain 1 26024
hsa CHTOP chromatin target of PRMT1 26097
hsa INTS1 integrator complex subunit 1 26173
hsa INTS6 integrator complex subunit 6 26512
hsa PABPC1 poly(A) binding protein cytoplasmic 1 26986
hsa SSU72 SSU72 homolog, RNA polymerase II CTD phosphatase 29101
hsa CPSF1 cleavage and polyadenylation specific factor 1 29894
hsa EXOSC3 exosome component 3 51010
hsa TRNT1 tRNA nucleotidyl transferase 1 51095
hsa CDC40 cell division cycle 40 51362
hsa LARP7 La ribonucleoprotein 7, transcriptional regulator 51574
hsa PCF11 PCF11 cleavage and polyadenylation factor subunit 51585
hsa CPSF3 cleavage and polyadenylation specific factor 3 51692
hsa POLR3K RNA polymerase III subunit K 51728
hsa CPSF2 cleavage and polyadenylation specific factor 2 53981
hsa EXOSC4 exosome component 4 54512
hsa PAF1 PAF1 homolog, Paf1/RNA polymerase II complex component 54623
hsa TRMT10C tRNA methyltransferase 10C, mitochondrial RNase P subunit 54931
hsa MAGOHB mago homolog B, exon junction complex subunit 55110
hsa MTPAP mitochondrial poly(A) polymerase 55149 IBA
hsa RPRD1A regulation of nuclear pre-mRNA domain containing 1A 55197
hsa WDR33 WD repeat domain 33 55339
hsa SAGE1 sarcoma antigen 1 55511
hsa ELAC1 elaC ribonuclease Z 1 55520
hsa INTS8 integrator complex subunit 8 55656
hsa PAPOLB poly(A) polymerase beta 56903
hsa EXOSC5 exosome component 5 56915
hsa INTS12 integrator complex subunit 12 57117
hsa THOC2 THO complex 2 57187
hsa INTS2 integrator complex subunit 2 57508
hsa RPRD1B regulation of nuclear pre-mRNA domain containing 1B 58490
hsa ELAC2 elaC ribonuclease Z 2 60528
hsa TENT4B terminal nucleotidyltransferase 4B 64282 IBA
hsa TUT1 terminal uridylyl transferase 1, U6 snRNA-specific 64852 IBA
hsa PAPOLG poly(A) polymerase gamma 64895
hsa UPF3B UPF3B regulator of nonsense mediated mRNA decay 65109
hsa ERI3 ERI1 exoribonuclease family member 3 79033
hsa THOC6 THO complex 6 79228
mmu Aplp1 amyloid beta (A4) precursor-like protein 1 11803
mmu App amyloid beta (A4) precursor protein 11820
mmu Fbl fibrillarin 14113
mmu Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 15108
mmu Ints6 integrator complex subunit 6 18130
mmu Pabpc2 poly(A) binding protein, cytoplasmic 2 18459
mmu Papola poly (A) polymerase alpha 18789 IEA
mmu Slbp stem-loop binding protein 20492
mmu Ssb Sjogren syndrome antigen B 20823
mmu Exosc5 exosome component 5 27998
mmu Larp7 La ribonucleoprotein domain family, member 7 28036
mmu Exosc9 exosome component 9 50911
mmu Exosc10 exosome component 10 50912
mmu Cpsf2 cleavage and polyadenylation specific factor 2 51786
mmu Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit 52575
mmu Cpsf4l cleavage and polyadenylation specific factor 4-like 52670
mmu Cpsf4 cleavage and polyadenylation specific factor 4 54188
mmu Pabpn1 poly(A) binding protein, nuclear 1 54196
mmu Cpsf3 cleavage and polyadenylation specificity factor 3 54451
mmu Paf1 Paf1, RNA polymerase II complex component 54624
mmu Papolb poly (A) polymerase beta (testis specific) 56522 IEA
mmu Exosc3 exosome component 3 66362
mmu Exosc7 exosome component 7 66446
mmu Rps21 ribosomal protein S21 66481
mmu Fip1l1 FIP1 like 1 (S. cerevisiae) 66899
mmu Polr3k polymerase (RNA) III (DNA directed) polypeptide K 67005
mmu Eri1 exoribonuclease 1 67276
mmu Mtpap mitochondrial poly(A) polymerase 67440 IBA
mmu Ncbp2 nuclear cap binding protein subunit 2 68092
mmu Sympk symplekin 68188
mmu Nudt21 nudix (nucleoside diphosphate linked moiety X)-type motif 21 68219
mmu Toe1 target of EGR1, member 1 (nuclear) 68276
mmu Ints1 integrator complex subunit 1 68510
mmu Elac2 elaC ribonuclease Z 2 68626
mmu Ssu72 Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) 68991
mmu Polr2d polymerase (RNA) II (DNA directed) polypeptide D 69241
mmu Exosc8 exosome component 8 69639
mmu Ints14 integrator complex subunit 14 69882
mmu Tut1 terminal uridylyl transferase 1, U6 snRNA-specific 70044 IBA
mmu Trnt1 tRNA nucleotidyl transferase, CCA-adding, 1 70047
mmu Ints2 integrator complex subunit 2 70422
mmu Rprd1b regulation of nuclear pre-mRNA domain containing 1B 70470
mmu Eri2 exoribonuclease 2 71151
mmu Pnpt1 polyribonucleotide nucleotidyltransferase 1 71701
mmu Ints12 integrator complex subunit 12 71793
mmu Ptcd1 pentatricopeptide repeat domain 1 71799
mmu Lsm11 U7 snRNP-specific Sm-like protein LSM11 72290
mmu Exosc6 exosome component 6 72544
mmu Ints8 integrator complex subunit 8 72656
mmu Parn poly(A)-specific ribonuclease (deadenylation nuclease) 74108
mmu Wdr33 WD repeat domain 33 74320
mmu Pcf11 PCF11 cleavage and polyadenylation factor subunit 74737
mmu Rprd2 regulation of nuclear pre-mRNA domain containing 2 75137
mmu Ints7 integrator complex subunit 7 77065
mmu Cstf2t cleavage stimulation factor, 3' pre-RNA subunit 2, tau 83410
mmu Lin28a lin-28 homolog A 83557 ISO
mmu Cpsf1 cleavage and polyadenylation specific factor 1 94230
mmu Clp1 CLP1, cleavage and polyadenylation factor I subunit 98985
mmu Tent2 terminal nucleotidyltransferase 2 100715 IBA
mmu Usb1 U6 snRNA biogenesis 1 101985
mmu Scaf8 SR-related CTD-associated factor 8 106583
mmu Cstf2 cleavage stimulation factor, 3' pre-RNA subunit 2 108062
mmu Exosc4 exosome component 4 109075
mmu Ints5 integrator complex subunit 5 109077
mmu Elac1 elaC ribonuclease Z 1 114615
mmu Lsm10 U7 snRNP-specific Sm-like protein LSM10 116748
mmu Eri3 exoribonuclease 3 140546
mmu Tent4a terminal nucleotidyltransferase 4A 210106 IBA
mmu Tut7 terminal uridylyl transferase 7 214290 IBA,ISO
mmu Cdc73 cell division cycle 73, Paf1/RNA polymerase II complex component 214498
mmu Tent4b terminal nucleotidyltransferase 4B 214627 IBA
mmu Papolg poly(A) polymerase gamma 216578 IEA
mmu Zc3h3 zinc finger CCCH type containing 3 223642
mmu Rprd1a regulation of nuclear pre-mRNA domain containing 1A 225283
mmu Exosc2 exosome component 2 227715
mmu Cstf3 cleavage stimulation factor, 3' pre-RNA, subunit 3 228410 IBA
mmu Ahcyl1 S-adenosylhomocysteine hydrolase-like 1 229709
mmu Tut4 terminal uridylyl transferase 4 230594 IBA,IDA,ISO
mmu Leo1 Leo1, Paf1/RNA polymerase II complex component 235497
mmu Ints6l integrator complex subunit 6 like 236790
mmu Fbll1 fibrillarin-like 1 237730
mmu Zfp473 zinc finger protein 473 243963
mmu Dkc1 dyskeratosis congenita 1, dyskerin 245474
mmu Cpsf7 cleavage and polyadenylation specific factor 7 269061
mmu Supv3l1 suppressor of var1, 3-like 1 (S. cerevisiae) 338359
mmu Lin28b lin-28 homolog B 380669 ISO
mmu Pabpc1l poly(A) binding protein, cytoplasmic 1-like 381404
mmu Cpsf6 cleavage and polyadenylation specific factor 6 432508
mmu Ncbp1 nuclear cap binding protein subunit 1 433702
rno App amyloid beta precursor protein 54226
rno Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 63864
rno Rps21 ribosomal protein S21 81775
rno Ssb small RNA binding exonuclease protection factor La 81783
rno Dkc1 dyskerin pseudouridine synthase 1 170944
rno Scaf8 SR-related CTD-associated factor 8 245926
rno Elac2 elaC ribonuclease Z 2 282826
rno Ints1 integrator complex subunit 1 288514
rno Ints7 integrator complex subunit 7 289382
rno Fip1l1 factor interacting with PAPOLA and CPSF1 289582
rno Rprd1a regulation of nuclear pre-mRNA domain containing 1A 291736
rno Nudt21 nudix hydrolase 21 291877
rno Sympk symplekin 292683
rno Fbl fibrillarin 292747
rno Zfp473 zinc finger protein 473 292884
rno Supv3l1 Suv3 like RNA helicase 294385
rno Exosc9 exosome component 9 294975
rno Exosc8 exosome component 8 295050
rno Ints12 integrator complex subunit 12 295448
rno Pabpc1l poly(A) binding protein, cytoplasmic 1-like 296351
rno Ints8 integrator complex subunit 8 297823
rno Ncbp1 nuclear cap binding protein subunit 1 298075
rno Toe1 target of EGR1, exonuclease 298443
rno Ssu72 SSU72 homolog, RNA polymerase II CTD phosphatase 298681
rno Cpsf3 cleavage and polyadenylation specific factor 3 298916
rno Cpsf2 cleavage and polyadenylation specific factor 2 299256
rno Cpsf6 cleavage and polyadenylation specific factor 6 299811
rno Zc3h3 zinc finger CCCH type containing 3 300032
rno Exosc4 exosome component 4 300045
rno Ints14 integrator complex subunit 14 300782
rno Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component 300837
rno Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit 304012
rno Cpsf4 cleavage and polyadenylation specific factor 4 304277
rno Ptcd1 pentatricopeptide repeat domain 1 304278
rno Cdc73 cell division cycle 73 304832
rno Papolg poly(A) polymerase gamma 305586
rno Tent4a terminal nucleotidyltransferase 4A 306672 IBA
rno Mtpap mitochondrial poly(A) polymerase 307050 IBA
rno Wdr33 WD repeat domain 33 307524
rno Elac1 elaC ribonuclease Z 1 307604
rno Usb1 U6 snRNA biogenesis phosphodiesterase 1 307643
rno Tent4b terminal nucleotidyltransferase 4B 307745 IBA
rno Exosc6 exosome component 6 307850
rno Exosc5 exosome component 5 308441
rno Ints5 integrator complex subunit 5 309200
rno Cstf2t cleavage stimulation factor subunit 2, tau variant 309338
rno Clp1 cleavage factor polyribonucleotide kinase subunit 1 311166
rno Rprd1b regulation of nuclear pre-mRNA domain containing 1B 311591
rno Cstf1 cleavage stimulation factor subunit 1 311670
rno Trnt1 tRNA nucleotidyl transferase 1 312616
rno Exosc3 exosome component 3 313243
rno Tut4 terminal uridylyl transferase 4 313481 IBA,ISO
rno Eri3 ERI1 exoribonuclease family member 3 313535
rno Exosc10 exosome component 10 313707
rno Papola poly (A) polymerase alpha 314417
rno Exosc7 exosome component 7 316098
rno Parn poly(A)-specific ribonuclease 360464
rno Ints2 integrator complex subunit 2 360589
rno Pnpt1 polyribonucleotide nucleotidyltransferase 1 360992
rno Ints6 integrator complex subunit 6 361057
rno Eri1 exoribonuclease 1 361159
rno Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component 361531
rno Pcf11 PCF11 cleavage and polyadenylation factor subunit 361605
rno Tent2 terminal nucleotidyltransferase 2 361878 IBA
rno Ahcyl1 adenosylhomocysteinase-like 1 362013
rno Cstf3 cleavage stimulation factor subunit 3 362178 IBA
rno Fbll1 fibrillarin-like 1 363563
rno Polr2d RNA polymerase II subunit D 364834
rno Cpsf7 cleavage and polyadenylation specific factor 7 365407
rno Exosc2 exosome component 2 366017
rno Polr3k RNA polymerase III subunit K 366277
rno Lsm10 LSM10, U7 small nuclear RNA associated 366468
rno Cpsf1 cleavage and polyadenylation specific factor 1 366952
rno Tut1 terminal uridylyl transferase 1, U6 snRNA-specific 499314 IBA
rno Lin28a lin-28 homolog A 500562 ISO
rno Tut7 terminal uridylyl transferase 7 501515 IBA,ISO
rno Lsm11 LSM11, U7 small nuclear RNA associated 501688
rno Aplp1 amyloid beta precursor like protein 1 502317
rno Slbp stem-loop binding protein 681062
rno Cstf2 cleavage stimulation factor subunit 2 683927
rno Larp7 La ribonucleoprotein 7, transcriptional regulator 686883
rno Lin28b lin-28 homolog B 689054 ISO
rno Ncbp2 nuclear cap binding protein subunit 2 689116
rno Eri2 ERI1 exoribonuclease family member 2 691484
rno LOC100363294 stem-loop binding protein-like 100363294
gga BAZ2B bromodomain adjacent to zinc finger domain 2B 395400
gga VWA9 von Willebrand factor A domain containing 9 415540
gga INTS2 integrator complex subunit 2 417640
gga SSU72 SSU72 homolog, RNA polymerase II CTD phosphatase 419410
gga RPRD1A regulation of nuclear pre-mRNA domain containing 1A 420953
gga INTS7 integrator complex subunit 7 421374
gga LIN28B lin-28 homolog B 421786 ISS
gga DKC1 dyskerin pseudouridine synthase 1 422196
gga CLP1 cleavage and polyadenylation factor I subunit 1 423131
gga SUPV3L1 Suv3 like RNA helicase 423697
gga CDC73 cell division cycle 73 424356
gga NCBP1 nuclear cap binding protein subunit 1 427379
gga LIN28A lin-28 homolog A 428206 ISS
dre cpsf4 cleavage and polyadenylation specific factor 4 30203
dre ints7 integrator complex subunit 7 286776
dre rprd1b regulation of nuclear pre-mRNA domain containing 1B 321636
dre gnl3 guanine nucleotide binding protein-like 3 (nucleolar) 321897
dre exosc8 exosome component 8 323016
dre tut4 terminal uridylyl transferase 4 323683
dre cpsf3 cleavage and polyadenylation specific factor 3 324554
dre exosc6 exosome component 6 326786
dre ints14 integrator complex subunit 14 327593
dre rprd2a regulation of nuclear pre-mRNA domain containing 2a 334701
dre larp7 La ribonucleoprotein 7, transcriptional regulator 334956
dre cstf2 cleavage stimulation factor, 3' pre-RNA, subunit 2 386806
dre cdc73 cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 393319
dre ints6l integrator complex subunit 6 like 393406
dre papolg poly(A) polymerase gamma 393593 IEA
dre ssu72 SSU72 homolog, RNA polymerase II CTD phosphatase 393701
dre exosc4 exosome component 4 393712
dre exosc10 exosome component 10 394064
dre lin28ab lin-28 homolog Ab 394066 ISS
dre nudt21 nudix hydrolase 21 394092
dre rps21 ribosomal protein S21 394166
dre papola poly(A) polymerase alpha 404041 IEA
dre fbl fibrillarin 406275
dre cstf3 cleavage stimulation factor, 3' pre-RNA, subunit 3 406326 IBA
dre slbp stem-loop binding protein 407727
dre ints12 integrator complex subunit 12 415251
dre cpsf1 cleavage and polyadenylation specific factor 1 432372
dre polr2d RNA polymerase II subunit D 436588
dre cpsf2 cleavage and polyadenylation specific factor 2 436657
dre polr3k polymerase (RNA) III (DNA directed) polypeptide K 436826
dre usb1 U6 snRNA biogenesis 1 445066
dre elac1 elaC ribonuclease Z 1 445109
dre wdr33 WD repeat domain 33 449009
dre fip1l1b FIP1 like 1b (S. cerevisiae) 450021
dre exosc9 exosome component 9 450057
dre pcf11 PCF11 cleavage and polyadenylation factor subunit 492341
dre elac2 elaC ribonuclease Z 2 492652
dre exosc2 exosome component 2 550234
dre exosc7 exosome component 7 550247
dre ints2 integrator complex subunit 2 553563
dre tent2 terminal nucleotidyltransferase 2 553626 IBA
dre eri1 exoribonuclease 1 553641
dre eri2 ERI1 exoribonuclease family member 2 553667
dre ints8 integrator complex subunit 8 553794
dre rprd2b regulation of nuclear pre-mRNA domain containing 2b 556426
dre tent4a terminal nucleotidyltransferase 4A 557829 IBA
dre slbp2 stem-loop binding protein 2 558918
dre fip1l1a FIP1 like 1a (S. cerevisiae) 561900
dre ints1 integrator complex subunit 1 562131
dre tut7 terminal uridylyl transferase 7 562358
dre mtpap mitochondrial poly(A) polymerase 563801 IBA
dre tut1 terminal uridylyl transferase 1, U6 snRNA-specific 564388 IBA
dre ints5 integrator complex subunit 5 564642
dre exosc3 exosome component 3 565000
dre clp1 cleavage factor polyribonucleotide kinase subunit 1 565621
dre toe1 target of EGR1, exonuclease 568260
dre ints6 integrator complex subunit 6 569456
dre ptcd1 pentatricopeptide repeat domain 1 570247
dre supv3l1 SUV3-like helicase 570852
dre sympk symplekin 570858
dre dkc1 dyskeratosis congenita 1, dyskerin 613144
dre exosc5 exosome component 5 751632
dre lsm11 LSM11, U7 small nuclear RNA associated 100004030
dme MTPAP mitochondrial poly(A) polymerase 31081 IBA
dme IntS6 Integrator 6 31496
dme IntS4 Integrator 4 31793
dme Trf4-1 Topoisomerase related function 4-1 31795 IBA
dme wisp wispy 32152 IBA
dme Rrp45 Rrp45 32665
dme IntS2 Integrator 2 32745
dme Ssu72 Ssu72 CTD phosphatase 32973
dme Clp Clipper 33259
dme IntS14 Integrator 14 33300
dme RpS21 Ribosomal protein S21 33487
dme Ski6 Ski6 34721
dme bsf bicoid stability factor 35100
dme CG15160 uncharacterized protein 35109
dme Nbr Nibbler 35385
dme Pabp2 Pabp2 35788
dme Lsm11 Lsm11 36013
dme RNaseZ Ribonuclease Z 36086
dme Lsm10 Lsm10 36141
dme FLASH FLICE-associated huge protein 36455
dme cbc crowded by cid 36494
dme CG6220 uncharacterized protein 36520
dme Pcf11 Pcf11 cleavage and polyadenylation factor subunit 36658
dme Rrp42 Rrp42 36766
dme IntS8 Integrator 8 36886
dme Snp Snipper 37511
dme Fib Fibrillarin 37662
dme Rrp4 Rrp4 37731
dme IntS1 Integrator 1 37840
dme Nop60B Nucleolar protein at 60B 37873
dme CG9018 uncharacterized protein 38283
dme CG4611 uncharacterized protein 38601
dme Rexo5 RNA exonuclease 5 38740
dme mkg-p monkey king protein 38955 IBA
dme Cpsf5 Cleavage and polyadenylation specific factor 5 39083
dme defl deflated 39141
dme Cdk8 Cyclin-dependent kinase 8 39157
dme IntS9 Integrator 9 39763
dme Mtr3 Mtr3 40173
dme Suv3 Suv3 helicase 40543
dme Fip1 Factor interacting with poly(A) polymerase 1 40569
dme Wdr33 WD repeat domain 33 40698
dme CG2100 uncharacterized protein 40707
dme Sym Symplekin 40709
dme Tailor tailor 40847 IBA
dme hyx hyrax 41086
dme CG16790 uncharacterized protein 41155
dme Rrp46 Rrp46 41270
dme CG10909 uncharacterized protein 41581
dme omd oocyte maintenance defects 41674
dme Rrp6 Rrp6 41798
dme CycC Cyclin C 41801
dme asun asunder 41971
dme CstF64 Cleavage stimulation factor 64 kD subunit 42239
dme Cpsf73 Cleavage and polyadenylation specificity factor 73 42240
dme nos nanos 42297
dme Gld2 GLD2 poly(A) polymerase 42602 IBA
dme orb oo18 RNA-binding protein 42752
dme Trf4-2 Topoisomerase related function 4-2 42983 IBA
dme IntS12 Integrator 12 43227
dme Cpsf100 Cleavage and polyadenylation specificity factor 100 43426
dme Slbp Stem-loop binding protein 43448
dme IntS11 Integrator 11 43506
dme PNPase Polynucleotide phosphorylase 43710
dme Cpsf160 Cleavage and polyadenylation specificity factor 160 44250
dme hrg hiiragi 49636
dme Rrp40 Ribosomal RNA processing 40 319033
dme su(f) suppressor of forked 3354994 IBA
dme snRNA:U7 small nuclear RNA U7 3772175
dme CG33785 uncharacterized protein 3772344
dme Rpb4 RNA polymerase II subunit Rpb4 14462484
cel nrd-1 uncharacterized protein 172064
cel pup-3 PAP-associated domain-containing protein 172207 IBA
cel gld-2 PAP-associated domain-containing protein;Poly(A) RNA polymerase gld-2 172338 IBA
cel cfim-1 Cleavage and polyadenylation specificity factor subunit 5 172657
cel cids-2 CID domain-containing protein 172691
cel gld-4 Poly(A) RNA polymerase gld-4 172735 IBA
cel rbm-3.1 RRM domain-containing protein 173070
cel rbm-3.2 RRM domain-containing protein 173071
cel R06C1.4 RRM domain-containing protein 173076
cel ints-8 INTegrator complex Subunit homolog 173216
cel F31C3.2 PAP-associated domain-containing protein 173373 IBA
cel exos-8 Ribosomal RNA-processing protein 43 174111
cel rpb-4 RPOL4c domain-containing protein 174208
cel suf-1 Suf domain-containing protein 174380 IBA
cel pap-2 Poly(A) polymerase 174513 IEA
cel crn-5 RNase_PH domain-containing protein 174634
cel cdl-1 Histone RNA hairpin-binding protein 174659
cel ints-7 Integrator complex subunit 7 174777
cel pap-3 Poly(A) polymerase 174816 IEA
cel parn-2 PARN (Poly(A)-specific RiboNuclease) homolog 174866
cel pfs-2 pre-mRNA 3' end processing protein pfs-2 175092
cel BE0003N10.1 Polyribonucleotide nucleotidyltransferase 175269
cel clpf-1 Clp1 domain-containing protein;Protein clpf-1 175442
cel cid-1 4Fe-4S ferredoxin-type domain-containing protein 175707 IBA
cel pup-2 PAP-associated domain-containing protein 175708 IBA
cel rps-21 40S ribosomal protein S21 176011
cel exos-9 Exosome complex component RRP45 176012
cel cids-1 CID domain-containing protein 1 176162
cel C06E1.9 Uncharacterized protein 176206
cel mut-7 Exonuclease mut-7 176347
cel K01G5.5 Putative H/ACA ribonucleoprotein complex subunit 4 176504
cel cpf-2 RRM domain-containing protein 176742
cel R02D3.8 Exonuclease domain-containing protein 176845
cel eri-1 3'-5' exonuclease eri-1;Exonuclease domain-containing protein 176868
cel F53H1.4 Integrator complex subunit 12 176944
cel cpsf-1 CPSF_A domain-containing protein;putative cleavage and polyadenylation specificity factor subunit 1 177003
cel cdc-73 Cell division cycle protein 73 177160
cel hoe-1 Ribonuclease Z 177241
cel exos-2 Ribosomal RNA-processing protein 4 177403
cel C08F8.2 ATP-dependent RNA helicase SUV3 homolog, mitochondrial;RNA helicase 178022
cel cpsf-4 Cleavage and polyadenylation specificity factor subunit 4 178151
cel cpsf-3 Cleavage and Polyadenylation Specificity Factor 178285
cel fipp-1 Fip1 domain-containing protein 178835
cel cpsf-2 putative cleavage and polyadenylation specificity factor subunit 2 179103
cel F43H9.3 NTP_transf_2 domain-containing protein 179181 IBA
cel pap-1 Poly(A) polymerase 179458 IEA
cel usip-1 U6 snRNA-specific terminal uridylyltransferase 179670 IBA
cel ints-2 INTegrator complex Subunit homolog 179921
cel fib-1 rRNA 2'-O-methyltransferase fibrillarin 179999
cel ints-5 INTegrator complex Subunit homolog 180207
cel exos-7 RNase_PH domain-containing protein 180369
cel crn-4 Cell death-related nuclease 4 180536
cel ints-1 INTegrator complex Subunit homolog 182280
cel symk-1 SYMpleKin cleavage and polyadenylation factor 182490
cel C49H3.4 Sm domain-containing protein 183627
cel F43E2.1 Uncharacterized protein 185708 IBA
cel exos-3 Ribosomal RNA-processing protein 40 186604
cel mut-2 NTP_transf_2 domain-containing protein 187005 IBA
cel M02B7.2 Exonuclease domain-containing protein 187397
cel T08B2.4 Uncharacterized protein 188273 IBA
cel ssup-72 RNA polymerase II subunit A C-terminal domain phosphatase ssup-72 188472
cel phf-30 Integrator complex subunit 12 188776
cel Y34F4.3 PAP-associated domain-containing protein 189592 IBA
cel pcf-11 CID domain-containing protein;Polyadenylation and cleavage factor homolog 11 246008
cel exos-4.2 RNase_PH domain-containing protein 259488
cel R07H5.11 Uncharacterized protein 259596 IBA
cel K07A1.15 Sm domain-containing protein 3565158
cel crn-3 HRDC domain-containing protein 3565889
cel C53A5.16 Uncharacterized protein 13216596 IBA
cel ints-6 VWFA domain-containing protein 24104403
cel exos-4.1 Putative exosome complex component RRP41 24105309
sce RRP43 exosome non-catalytic core subunit RRP43 850401
sce RPS0B ribosomal 40S subunit protein S0B 850737
sce REX2 Rex2p 850748
sce REX3 RNA exonuclease 850797
sce CFT2 cleavage polyadenylation factor subunit CFT2 850806
sce USB1 phosphoric diester hydrolase 850823
sce CBF5 pseudouridine synthase CBF5 850872
sce YSH1 cleavage polyadenylation factor subunit YSH1 850983
sce GSP1 Ran GTPase GSP1 851000
sce CDC73 Cdc73p 851136
sce SEN1 putative DNA/RNA helicase SEN1 851150
sce PTA1 RNA-processing protein PTA1 851255
sce RRP42 exosome non-catalytic core subunit RRP42 851447
sce KIN28 TFIIH complex serine/threonine-protein kinase subunit KIN28 851450
sce SUB2 ATP-dependent RNA helicase SUB2 851475
sce TSR1 Tsr1p 851499
sce NOP1 rRNA methyltransferase NOP1 851548
sce RPC11 DNA-directed RNA polymerase III core subunit RPC11 851615
sce HPR1 Hpr1p 851716
sce SAC3 Sac3p 851737
sce REF2 RNA-processing protein REF2 851776
sce PCF11 Pcf11p 851814
sce RRP45 exosome non-catalytic core subunit RRP45 851874
sce RTT103 Rtt103p 851884
sce CFT1 cleavage/polyadenylation factor CFT1 851895
sce PAF1 Paf1p 852582
sce RTF1 Rtf1p 852607
sce NAB2 mRNA-binding protein NAB2 852755
sce RNA15 Rna15p 852838
sce RRP46 exosome non-catalytic core subunit RRP46 852987
sce PTI1 cleavage polyadenylation factor subunit PTI1 853060
sce MTR3 exosome non-catalytic core subunit MTR3 853062
sce SKI6 exosome non-catalytic core subunit SKI6 853109
sce RPS0A ribosomal 40S subunit protein S0A 853128
sce RNH70 Rnh70p 853193
sce PXR1 telomerase inhibitor 853197
sce RPB4 DNA-directed RNA polymerase II subunit RPB4 853301
sce RPS21B ribosomal 40S subunit protein S21B 853305
sce MTR4 ATP-dependent RNA helicase MTR4 853397
sce FIP1 cleavage polyadenylation factor subunit FIP1 853555
sce IPA1 putative polyadenylation protein 853606
sce CTK1 cyclin-dependent serine/threonine protein kinase CTK1 853718
sce MPE1 cleavage polyadenylation factor subunit MPE1 853806
sce SWD2 WD-repeat containing protein SWD2 853851
sce PAP1 polynucleotide adenylyltransferase PAP1 853871 IEA
sce RPS21A ribosomal 40S subunit protein S21A 853931
sce TRZ1 tRNase Z 853954
sce HRP1 Hrp1p 853997
sce CTR9 Ctr9p 854020
sce RRP40 exosome non-catalytic core subunit RRP40 854023
sce PAP2 non-canonical poly(A) polymerase PAP2 854034 IBA
sce THP1 Thp1p 854082
sce DIS3 exosome catalytic subunit DIS3 854138
sce RRP6 exosome nuclease subunit RRP6 854162
sce CLP1 cleavage polyadenylation factor subunit CLP1 854424
sce FKH1 forkhead family transcription factor FKH1 854675
sce RNA14 cleavage polyadenylation factor subunit RNA14 855083 IBA
sce RNT1 ribonuclease III 855280
sce YMR265C uncharacterized protein 855307
sce PFS2 cleavage polyadenylation factor subunit PFS2 855399
sce TRF5 non-canonical poly(A) polymerase TRF5 855417 IBA
sce NRD1 Nrd1 complex RNA-binding subunit 855470
sce CSL4 exosome non-catalytic core subunit CSL4 855489
sce SSU72 RNA polymerase II subunit A C-terminal domain phosphatase 855499
sce THO2 Tho2p 855583
sce MPP6 Mpp6p 855758
sce NAB3 Nab3p 855911
sce SUV3 ATP-dependent RNA helicase SUV3 856078
sce YTH1 cleavage polyadenylation factor RNA-binding subunit YTH1 856222
sce RRP4 exosome non-catalytic core subunit RRP4 856466
sce LRP1 Lrp1p 856481
sce FIR1 Fir1p 856754
sce PAB1 polyadenylate-binding protein 856912
sce CCA1 tRNA adenylyltransferase 856915
spo rpm1 3' ssRNA-specific 3'-to-5' exonuclease 2538798
spo cti1 Cut3-interacting putative exosome subunit Cti1 2539105
spo SPCC757.08 putative exosome subunit Rrp45 2539106
spo csl4 putative exosome subunit Csl4 2539351
spo ago1 argonaute 2539403
spo cid12 poly(A) polymerase Cid12 2539423 IBA
spo SPCC645.10 putative ATP/CTP tRNA nucleotidyltransferase 2539578
spo SPBC17G9.02c putative Cdc73 family RNA polymerase II accessory factor 2539616
spo rrp46 putative exosome subunit Rrp46 2539660
spo cft1 putative protein Cft1 2539694
spo pab2 poly(A)-binding protein Pab2 2539733
spo cid11 putative poly(A) polymerase Cid11 2539762 IBA
spo SPBC1734.10c putative mRNA processing protein 2539886
spo cft2 putative cleavage/polyadenylation factor Cft2/CPSF-73 2539954
spo pac1 double-strand-specific ribonuclease Pac1 2540084
spo SPBC16G5.10 putative exosome subunit Rrp42 2540116
spo SPBC17D1.03c putative exosome subunit Rrp43 2540189
spo SPBC337.03 putative RNA polymerase II transcription termination factor 2540220
spo eri1 double-strand siRNA ribonuclease Eri1 2540347
spo dis3 putative 3'-5' exoribonuclease subunit Dis3 2540398
spo SPBC211.08c exosome complex component mtr3 2540412
spo fib1 fibrillarin 2540479
spo SPBC29A10.09c putative CAF1 family ribonuclease 2540515
spo SPBC29A10.10c putative tRNA-splicing endonuclease positive effector 2540523 ISO
spo rps21 40S ribosomal protein S21 2540806
spo trz2 3'-tRNA-processing endonuclease Trz2 2540985
spo rpb4 DNA-directed RNA polymerase II complex subunit Rpb4 2541011
spo ctf1 cleavage and polyadenylation specificity factor complex subunit Ctf1 2541018
spo SPBC4.02c hypothetical protein 2541076
spo pla1 poly(A) polymerase Pla1 2541099
spo SPBC660.15 putative cleavage factor complex subunit 2541150
spo SPBP8B7.15c putative RBBP6 family ubiquitin-protein ligase E3 2541385
spo pabp mRNA export shuttling protein 2541505
spo yth1 cleavage and polyadenylation specificity factor complex subunit Yth1 2541506
spo rpc11 DNA-directed RNA polymerase III complex subunit Rpc11 2541521
spo sla1 La-motif domain-containing protein 2541530
spo rna14 putative cleavage and polyadenylation specificity factor complex subunit Rna14 2541600 IBA
spo SPAC2F7.14c putative exosome subunit Rrp4 2541813
spo SPAC22A12.12c putative exosome subunit Rrp40 2541837
spo SPAC22G7.10 fip1-like pre-mRNA polyadenylation factor 2541873
spo SPAC22H10.05c putative cleavage and polyadenylation specificity factor complex subunit 2541907
spo seb1 RNA-binding protein Seb1 2541942
spo SPAC23C11.10 hypothetical protein 2542061
spo rex3 putative exonuclease Rex3 2542165
spo cid16 putative poly(A) polymerase Cid16 2542188 IBA,IMP
spo ysh1 cleavage and polyadenylation specificity factor complex endoribonuclease subunit Ysh1 2542258
spo cid1 poly(A) polymerase Cid1 2542420 IBA
spo uap56 ATP-dependent RNA helicase Uap56 2542433
spo trz1 putative 3' tRNA-processing endonuclease tRNAse Z L2 Trz1 2542457
spo cbf5 putative pseudouridylate synthase Cbf5 2542481
spo SPAC824.04 putative WD repeat protein 2542845
spo SPAC1093.04c putative tRNA nucleotidyltransferase 2542977
spo SPAC4G9.04c putative cleavage and polyadenylation specificity factor 2543037
spo pfs2 WD repeat protein Pfs2 2543089
spo cid13 poly(A) polymerase Cid13 2543204 IBA
spo rrp41 putative exosome 3'-5' phosphorolytic exoribonuclease Rrp41 2543451
spo ssu72 putative phosphoric ester hydrolase Ssu72 2543452
spo SPAC644.16 putative RNA-binding protein 2543462
spo SPAC637.09 putative ribonuclease H70 2543505
spo pta1 cleavage and polyadenylation specificity factor complex subunit Pta1 2543538
spo rrp6 putative exosome 3'-5' exoribonuclease subunit Rrp6 2543630
spo nab3 putative poly(A)-binding protein Nab3 2543638 NAS
spo rpm2 ATP-dependent RNA helicase Rpm2 2543678
spo cid14 poly(A) polymerase Cid14 3361384 IBA,IMP
spo tho2 putative THO complex subunit Tho2 3361454


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