Orthologous genes in OrthoFinder**

Species Gene Description
 gga-u.3   LIN28B   lin-28 homolog B 
 gga-r.3   LIN28B   lin-28 homolog B 
 gga-m.5   LIN28B   lin-28 homolog B 
 gga-u.3   LIN28A   lin-28 homolog A 
 hsa-u.4   LIN28A   lin-28 homolog A 
 hsa-u.4   LIN28B   lin-28 homolog B 
 mmu-u.4   Lin28b   lin-28 homolog B 
 mmu-u.4   Lin28a   lin-28 homolog A 
 rno-u.3   Lin28b   lin-28 homolog B 
 mcc-u.3   LIN28A   lin-28 homolog A 
 mcc-u.3   LIN28B   lin-28 homolog B 
 dre-u.3   lin28aa   lin-28 homolog Aa 
 dre-u.3   lin28b   lin-28 homolog B (C. elegans) 
 dre-u.3   lin28ab   lin-28 homolog Ab 
 dme-u.3   lin-28   lin-28 
 cel-u.3   lin-28   Protein lin-28 

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Top 50 coexpressed genes to LIN28B (gga-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 gga270   Cysteine and methionine metabolism  2 43 2.10
 gga380   Tryptophan metabolism  1 37 -
 gga330   Arginine and proline metabolism  1 42 -
 gga480   Glutathione metabolism  1 49 -
 gga310   Lysine degradation  1 56 -

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gga:LIN28B (lin-28 homolog B) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

gga-u.3
for
LIN28B
gga-r.3
for
LIN28B
gga-m.5
for
LIN28B
gga-u.3
for
LIN28A
hsa-u.4
for
LIN28A
hsa-u.4
for
LIN28B
mmu-u.4
for
Lin28b
mmu-u.4
for
Lin28a
rno-u.3
for
Lin28b
mcc-u.3
for
LIN28A
mcc-u.3
for
LIN28B
dre-u.3
for
lin28aa
dre-u.3
for
lin28b
dre-u.3
for
lin28ab
dme-u.3
for
lin-28
cel-u.3
for
lin-28
1 WHSC1 Wolf-Hirschhorn syndrome candidate 1 422897 3.8 1.8
 1.8
 1.0
-0.7
 -0.6
 -1.0
 0.7
-0.4
 -0.9
-1.2
 1.2
-1.2
 -0.5
-1.3
 -0.1
-0.4
 0.7
0.3
 -0.2
-0.5
 2.0
0.7
 -0.7
2 GNOT2 Gnot2 homeodomain protein 396117 3.4 1.2
 1.9
 2.8






1.2
 -0.6
 0.0

3 NANOG Nanog homeobox 100272166 3.3 1.8
1.9
 3.6
 1.1
 1.6
 1.9
2.9
2.5
 0.3



0.4
4 SCML2 Scm polycomb group protein like 2 418613 3.2 1.1
 1.9
 1.5
0.5
 1.6
-0.3
 1.9
-0.9
 2.3
-0.1
 1.1
-1.2
 0.8
0.1
 0.7
-0.9
 1.0
-1.3
 1.0
-0.1
 1.6
-0.3
 0.1
0.1
 -1.0
5 ARID3B AT-rich interaction domain 3B 100859297 3.1 1.7
1.8
1.6
 3.7
2.8
 4.2
3.6
 2.0
1.5
 4.7
4.1
 1.8
0.6
 2.4
1.1
 2.2
1.3
 2.8
2.5
 4.3
3.2
 3.1
2.9
 -0.1
 0.2
6 LIN28A lin-28 homolog A 428206 3.1 0.9
 1.9
 3.1
 6.1
 6.1
 4.6
 4.6
2.9
 2.9
 7.7
2.5
 3.4
2.5
 7.7
3.4

7 USP7 ubiquitin specific peptidase 7 395126 3.0 1.3
 1.6
 -0.2
 0.5
 0.5
 -0.2
 0.6
 0.3
 -0.5
 2.1
 -0.5
 -0.1
 0.4
 -0.1
 0.1
8 ZNF800 zinc finger protein 800 417747 3.0 0.7
 2.1
 -0.2
 -1.9
 -1.3
 0.3
 -2.0
 0.6
 -0.7
 0.0
 0.4
-0.3
 0.6
0.5
 1.3
0.4
 -2.0
9 PLCH1 phospholipase C eta 1 425030 3.0 1.3
 1.5
 1.5
 1.6
 1.9
 2.9
 1.7
0.7
 1.0
 2.1
 2.1
 1.7

10 HMGA1 high mobility group AT-hook 1 378795 2.9 1.6
 1.2












11 DACH2 dachshund family transcription factor 2 395576 2.9 0.9
 1.8
 -0.1
-0.7

1.3
 2.0
 1.1
-0.3
 0.3
-0.4
 0.8
0.2
 -0.2
-0.6
 -0.2
-0.8
 -0.1
-0.8
 0.5
 -1.2
12 SALL4 spalt like transcription factor 4 769286 2.8 1.5
 1.2
 1.5
1.3
 5.1
1.9
 3.9
2.5
 3.9
1.9
 10.3
2.4
 3.3
0.8
 2.6
1.8
 2.9
2.4
 3.7
1.4
 2.6
-0.3
 2.5
0.6
 0.0
-0.8
 0.7
13 TBXT T-box transcription factor T 395782 2.8 1.5
 1.2
 1.7
0.9
 1.4
1.1
 1.1
-0.3

0.1
 -1.8
 -0.9
 2.3
 -0.3
 3.0
 2.8
14 FAM184A family with sequence similarity 184 member A 421727 2.8 1.5
 1.2
 0.2
 0.1
 1.8
 1.6
 -0.4
 0.4
 1.4
 1.9
 -1.1
-2.4
 -1.0
-2.2
 -1.3
-1.5
-0.2
15 DNMT3B DNA methyltransferase 3 beta 419287 2.8 1.8
 0.9
 1.7
 2.9
 2.9
 1.6
 4.4
 0.6
 1.6
 1.8
 -0.9
 -0.8
 -0.8

16 CYP26C1 cytochrome P450 family 26 subfamily C member 1 423806 2.7 0.7
 1.9
 2.3











17 TAF4B TATA-box binding protein associated factor 4b 421086 2.7 1.8
 0.9
 1.9
0.6
 0.3
0.1
 1.4
0.3
 1.1
0.6
 0.6
-0.0
 -0.2
 1.8
0.8
 1.3
 0.5
0.3
 0.9
0.7
 0.9
0.4
 -0.2
 0.3
18 BRSK1 BR serine/threonine kinase 1 423098 2.7 1.0
 1.5
 0.2
 0.4
0.2
 0.2
-0.1
 1.5
0.1
 0.7
-0.2
 0.8
0.2
 -0.0
-0.2
 1.5
0.5
 0.5
-0.5
 0.2
-0.0
 0.6
-0.8
 0.5
 0.7
19 SOGA3 SOGA family member 3 421713 2.7 2.0
 0.5
 0.3
 -0.0
 1.3
 2.1
 1.2
 -1.1
 -0.5
 0.7
 1.0
 0.2
 0.8

20 KIAA0556 KIAA0556 426427 2.6 0.8
 1.7
 -0.2
 -0.2
 -0.0
 0.1
 -0.5
 0.1
 -0.2
 -0.4
 -1.1
 0.5
 -0.8
2.3
21 FAM184B family with sequence similarity 184 member B 100859145 2.6 1.4
-1.0
 0.0
 -1.3
 1.5
 0.4
 2.2
 1.6
 -0.2




22 KSR2 kinase suppressor of ras 2 100858301 2.6 1.4
0.4
0.2
 -0.1
 0.5
 0.4
-1.8
 0.1
0.1
 -0.3
-0.7
 1.0
 0.1
 0.1
-0.6
 -0.1
-0.3
 0.4
0.3
 -0.5
 1.2
23 TFAP2C transcription factor AP-2 gamma 419327 2.6 1.3
 1.1
 1.8
1.4
 0.5
0.1
 2.0
0.8
 1.0
0.6
 1.8
-0.2
 0.6
0.1
 1.8
0.3
 2.0
-0.0
 -0.1
-0.3
 -0.1
-0.6
 0.8
-0.3
 0.5
 1.0
24 LOC107053085 uncharacterized LOC107053085 107053085 2.6 1.4













25 TPH2 tryptophan hydroxylase 2 408026 2.5 1.3
 1.2
 0.3
-0.0
 2.0
0.4
 2.3
0.9
 2.5
1.0
 0.4
-0.9
 0.9
0.2
 1.4
0.9
 2.4
1.4
 1.2
1.0
 1.6
-0.2
 0.6
0.4
 0.2
-0.4
 0.5
-0.9
26 PRTG protogenin 415407 2.5 0.7
 1.7
 1.8
 2.6
 2.9
 3.4
 4.5
 2.7
 0.8
 1.6
 4.3
 5.1
 5.6

27 PCDH19 protocadherin 19 422263 2.5 0.8
 1.6
 1.7
 0.2
 0.7
 0.2
 -0.9
 -1.2
 -0.0
 1.2
 -0.6
 -2.0
 -0.6

28 OPN1MSW opsin, green sensitive (rhodopsin-like) 396486 2.5 1.1
 1.3
 1.4
-0.4
 2.9
 0.5
 0.0
 0.9
 1.1
 -0.2
 0.2
 -0.1
-0.3
 0.1
-1.4
 0.7
-0.8

29 TRIM71 tripartite motif containing 71 428445 2.5 1.4
3.9
 7.3
 6.5
 4.4
 6.0
2.4
 1.8
 3.1
 3.5
 3.3
 0.4
 -0.5
30 SLC45A4 solute carrier family 45 member 4 420308 2.5 1.4
 1.0
 -0.5
-0.7
 1.5
-0.3
 0.6
-0.0
 0.3
-0.9
 0.6
0.4
 -0.1
-0.2
 0.6
0.2
 1.0
-0.6
 0.5
0.0
 0.7
0.4
 -0.4
-0.5
 0.8
-0.8
31 PYGO1 pygopus family PHD finger 1 415408 2.5 1.3
 1.1
 -0.6
-0.6
 -0.3
-1.4
 0.8
0.3
 1.5
-0.2
 0.6
-0.4
 0.6
-1.4
 1.2
0.1
 0.2
-1.6
 -1.6
 -0.0
 -0.1
 -0.6
32 TIAM1 T-cell lymphoma invasion and metastasis 1 418491 2.5 0.9
 1.5
 0.5
0.0
 0.9
0.2
 1.1
0.9
 -0.2
 1.4
 0.1
-0.3
 -0.6
-0.8
 0.1
-0.7
 3.1
0.1
 0.7
-0.2
 2.3
0.8
0.1
33 SCAF11 SR-related CTD-associated factor 11 417805 2.5 0.7
 1.6
 -0.2
 0.2
 -0.5
 -0.4
 0.3
 -0.2
 1.0
 0.3




34 RIF1 replication timing regulatory factor 1 424316 2.5 1.0
 1.4
 1.4
 0.6
 0.3
 -0.0
 0.2
 0.4
 0.7
 0.7
 1.0
 0.3
 0.7
 -1.1
35 TFCP2 transcription factor CP2 378900 2.5 0.6
 1.7
 1.0
0.5
 0.8
-0.1
 1.6
-0.3
 0.1
-0.4
 0.5
-0.6
 0.1
-0.5
 0.8
-0.2
 -0.0
-0.4
 0.2
-0.1
 2.2
0.3
 0.6
-0.0

36 DBF4 DBF4 zinc finger 420536 2.5 1.6
 0.8
 0.7
-0.2
 0.9
0.8
 1.4
0.7
 1.0
 0.8
 0.2
 0.5
0.2
 0.7
-0.2
 0.7
0.5
 0.0
-0.4
 1.4
-0.1
 -1.0
37 TICRR TOPBP1 interacting checkpoint and replication regulator 415489 2.4 0.8
 1.6
 1.1
 -0.3
 0.6
 -0.4
 1.0
 0.2
 -0.9
 0.8
 0.8
 0.0
 2.8
3.2
38 SMS spermine synthase 418602 2.4 1.6
 0.7
 -0.7
 0.6
 0.5
 1.1
 1.0
 1.3
 -0.7
 -0.2
 -0.7
 -1.6
 -1.1
 -1.0
39 KCNK12 potassium two pore domain channel subfamily K member 12 428554 2.4 1.4
 0.9
 0.4
-0.4
 1.4
-0.8
 0.5
-0.5
 1.0
-1.0
 1.0
0.7
 0.7
 0.5
0.5
 0.7
0.1



0.2
40 DUSP4 dual specificity phosphatase 4 395642 2.4 1.4
 0.9
 0.6
 0.3
 -0.1
 -0.5
 0.1
 -0.0
 -0.7
 -0.9
 1.2
 0.4
 2.2

41 LRRN1 leucine rich repeat neuronal 1 771599 2.4 0.9
 1.4
 0.8
0.5
 1.7
0.6
 0.1
-0.2
 0.8
-1.3
 0.6
-0.4
 0.6
-0.6
 0.8
-0.4
 0.5
-0.1
 1.8
0.4
 -0.2
-0.5
 0.8
-0.2
0.6
42 GLT1D1 glycosyltransferase 1 domain containing 1 416807 2.4 1.1
 1.2
 -0.2



1.1
 -0.4
 0.7
 -0.4
 -0.5
 -0.8

43 LOC107052805 feather keratin 1-like 107052805 2.4 1.3













44 GPRIN1 G protein regulated inducer of neurite outgrowth 1 101748622 2.4 1.3
-1.1
 -0.5
 -0.9
 -0.6
 0.4
 1.2
 -0.4
 1.1
 0.6
 0.9
 1.6

45 TPBG trophoblast glycoprotein 772098 2.4 1.1
 1.1
 1.3
-0.6
 0.7
 0.6
 0.8
-0.4
 -0.1
-0.1
 0.7
0.3
 -0.3
 -0.6
 2.2
1.7
 0.3
-0.4
 1.5
1.2
 0.2
-0.3
46 LOC121107704 uncharacterized LOC121107704 121107704 2.4 1.3













47 ANKHD1 ankyrin repeat and KH domain containing 1 416143 2.4 1.1
 1.2
 0.0
-0.2
 0.9
0.1
 0.3
-0.4
 0.4
0.3
 -0.4
-0.4
 0.1
-1.0
 0.7
-0.8
 0.2
-0.2
 0.7
 0.4
 0.6
 -0.6
 -0.0
48 MTFR2 mitochondrial fission regulator 2 421691 2.4 1.2
 1.0
 0.4
 -0.3
 1.0
 0.5
 1.1
 1.2
 -0.2
 0.2
 -0.1
 0.9
 0.5

49 KPNA5 karyopherin subunit alpha 5 421738 2.4 1.3
 1.0
 0.9
0.7
 0.7
-0.1
 0.9
-0.0
 -0.0
-1.0
 -0.2
-0.6
 2.0
0.8
 1.1
0.9
 0.5
-0.2
 1.7
0.7
 0.2
-0.0
 0.9
0.7
 -1.3
 -1.5
50 TTLL11 tubulin tyrosine ligase like 11 417115 2.3 0.9
 1.4
 -0.0

0.9
 0.0
 -0.1
 -0.4
 -0.6



0.2
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