Orthologous genes in OrthoFinder**

Species Gene Description
 dre-u.3   snrpd2   small nuclear ribonucleoprotein D2 polypeptide 
 dre-r.3   snrpd2   small nuclear ribonucleoprotein D2 polypeptide 
 dre-m.5   snrpd2   small nuclear ribonucleoprotein D2 polypeptide 
 hsa-u.4   SNRPD2   small nuclear ribonucleoprotein D2 polypeptide 
 mmu-u.4   Snrpd2   small nuclear ribonucleoprotein D2 
 rno-u.3   Snrpd2   small nuclear ribonucleoprotein D2 polypeptide 
 gga-u.3   SNRPD2   small nuclear ribonucleoprotein D2 polypeptide 
 mcc-u.3   SNRPD2   small nuclear ribonucleoprotein D2 polypeptide 
 cfa-u.3   SNRPD2   small nuclear ribonucleoprotein D2 polypeptide 
 dme-u.3   SmD2   Small ribonucleoprotein particle protein SmD2 
 cel-u.3   snr-4   putative small nuclear ribonucleoprotein Sm D2 
 sce-u.3   SMD2   mRNA splicing protein SMD2 
 spo-u.3   cmc1   putative cytochrome c oxidase assembly protein Cmc1 

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Top 50 coexpressed genes to snrpd2 (dre-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 dre3040   Spliceosome  17 138 7.35
 dre3020   RNA polymerase  6 33 7.78
 dre3018   RNA degradation  6 85 7.21
 dre4623   Cytosolic DNA-sensing pathway  4 39 5.60
 dre3013   Nucleocytoplasmic transport  3 108 2.62

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dre:snrpd2 (small nuclear ribonucleoprotein D2 polypeptide) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

dre-u.3
for
snrpd2
dre-r.3
for
snrpd2
dre-m.5
for
snrpd2
hsa-u.4
for
SNRPD2
mmu-u.4
for
Snrpd2
rno-u.3
for
Snrpd2
gga-u.3
for
SNRPD2
mcc-u.3
for
SNRPD2
cfa-u.3
for
SNRPD2
dme-u.3
for
SmD2
cel-u.3
for
snr-4
sce-u.3
for
SMD2
spo-u.3
for
cmc1
1 snrpg small nuclear ribonucleoprotein polypeptide G 447922 11.9 9.9
 0.9
 6.8
 12.9
5.5
 6.2
 10.1
 10.8
 9.7
 1.7
2 sap18 Sin3A-associated protein 393693 9.8 5.1
4.8
 -0.4
 2.3
 1.9
 2.8
 5.8
 6.7
 6.5
-0.8
3 phf5a PHD finger protein 5A 286774 9.4 4.9
4.1
 4.7
 4.5
 1.6
 4.1
 5.8
 6.5
 3.7
 4.1
4 polr2d RNA polymerase II subunit D 436588 9.1 4.7
0.5
 4.6
 2.4
 1.1
 2.4
 3.0
5.0
 1.7
 -0.2
5 snrpe small nuclear ribonucleoprotein polypeptide E 393979 8.8 7.0
 1.0
 7.3
 9.3
 4.7
 5.7
 6.8
 4.7
 12.3
 17.1
 4.7
6 polr2eb RNA polymerase II, I and III subunit E, b 445170 8.8 7.3
 0.7
 1.3
 5.5
 5.2
 1.5
 2.8
 4.8
 4.9
 8.6
 1.9
 0.2
7 snrpf small nuclear ribonucleoprotein polypeptide F 445404 8.7 7.1
 0.9
 8.6
2.4
 8.4
5.2
 5.4
 3.5
3.3
 7.4
6.0
 4.2
4.1
 10.4
5.3
 13.6
5.7
 1.0
-0.2
8 lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated 415167 8.3 6.4
 1.2
 8.6
2.4
 8.4
5.2
 5.4
 3.5
3.3
 7.4
6.0
 4.2
4.1
 10.4
5.3
 13.6
5.7
 1.0
-0.2
9 hypk huntingtin interacting protein K 100151755 7.9 4.1

4.2
 6.1
 5.9
 6.7
 4.4
 4.0
 3.6

10 lsm8 LSM8 homolog, U6 small nuclear RNA associated 566017 7.8 6.6
 0.5
 3.0
 3.6
 2.8
 1.5
 4.4
 5.6
 7.4
 6.5
 1.8
 -0.7
11 cbx3a chromobox homolog 3a (HP1 gamma homolog, Drosophila) 751689 7.5 3.9
3.3
0.9
 2.7
1.9
 1.8
1.7
 5.9
3.1
 3.6
3.1
 -0.1
-0.2
 8.3
5.3
 2.9
0.9
1.3
12 snrpa1 small nuclear ribonucleoprotein polypeptide A' 492511 7.3 3.8
1.2
 4.9
 3.0
 2.0
-0.6
 3.8
 6.7
0.4
13 psma3 proteasome 20S subunit alpha 3 564370 7.2 3.8
2.6
 3.3
 0.1
 2.7
 3.7
 2.8
 4.2
 3.3
 0.0
14 ppie peptidylprolyl isomerase E (cyclophilin E) 550373 6.9 3.6
3.7
 6.4
 5.2
 4.2
 4.4
 4.9
 3.5
 1.3

15 snrpd1 small nuclear ribonucleoprotein D1 polypeptide 192331 6.9 6.1
 0.2
 5.3
 6.4
 4.0
 2.8
 5.1
 6.0
 6.1
 12.1
 1.6
16 polr2i RNA polymerase II subunit I 449992 6.8 3.5
7.8
 9.4
 6.5
 2.2
 7.6
 9.1
 4.6
 2.8
 3.4
 -0.7
17 h3f3a H3 histone, family 3A 406269 6.8 3.5
1.5
1.4
 2.9
1.4
 5.2
2.0
 3.9
1.4
 3.2
2.5
 1.4
1.0
 4.5
1.9
 4.1
2.7
 2.4
0.5
 -0.8
-1.5
18 pfdn6 prefoldin subunit 6 393485 6.8 4.5
 1.7
 5.3
 10.2
 4.2
 4.2
 6.4
 2.7
 3.5
 3.6
 4.0
19 supt4h1 SPT4 homolog, DSIF elongation factor subunit 436782 6.7 3.5
3.1
 3.0
 4.7
 0.3
 2.5
 5.2
 5.5
 2.8
 1.3
 0.4
20 banf1 BAF nuclear assembly factor 1 334717 6.6 3.4
3.7
 7.8
 3.8
 5.0
 5.5
 5.2
 4.4
 8.3
-0.8
21 dpy30 dpy-30 histone methyltransferase complex regulatory subunit 436711 6.5 3.4
4.7
 5.8
 5.6
 1.3
 3.6
 2.7
 4.2
0.6
 6.8
 1.9
22 lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated 100535720 6.5 3.4
6.1
 7.6
 5.8
 0.8
 6.6
 2.1
 8.4
 5.5
 2.3
23 sumo3b small ubiquitin like modifier 3b 436950 6.4 3.3
2.6
2.4
 2.5
0.7
 3.8
2.7
 3.8
2.7
 3.4
2.7
 4.9
1.3
 9.0
 9.7
 1.8
24 snrpd3l small nuclear ribonucleoprotein D3 polypeptide, like 327011 6.4 5.7
 0.1
 4.9
 4.3
 5.4
 3.7
 6.5
 2.2
 4.1
 15.2
 3.9
 -0.6
25 rbbp4 retinoblastoma binding protein 4 321726 6.3 4.2
 1.5
 1.2
0.4
 2.0
1.2
 2.7
-0.2
 1.9
0.2
 0.7
-0.3
 -1.2
-1.5
 3.0
 3.9
2.7
 -0.0
-1.3
 0.2
26 polr2l RNA polymerase II, I and III subunit L 553705 6.2 5.0
 0.7
 5.5
 9.6
 6.2
 2.1
 7.0
 4.2
 5.4
 5.9
 2.3
27 tma7 translation machinery associated 7 homolog 768290 6.1 4.9
 0.7
 8.2
 8.3

9.0
1.2
8.2
-0.4
 7.0
 1.4
28 ptges3b prostaglandin E synthase 3b (cytosolic) 415227 5.9 4.7
 0.7
 -0.4
-0.5
 2.9
0.3
 1.6
1.0
 6.1
1.6
 1.0
 0.2
-0.9
 4.4
 5.0

29 lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated 573047 5.9 5.0
 0.4
 10.8
 12.9
 9.8
0.4
 2.3
 10.1
 7.2
 7.2
 5.3
 2.2
 0.3
30 bud31 BUD31 homolog 445383 5.9 3.1
4.5
 5.1
 2.8
 1.7
 3.1
 2.3
0.4
 3.1
 7.5
 0.4
 0.5
31 magoh mago homolog, exon junction complex subunit 100005893 5.8 4.9
 0.3
 3.9
1.6
 5.6
2.3
 4.6
1.2
 2.6
 2.8
2.8
 3.9
0.9
 9.8
 9.1

32 polr2k RNA polymerase II, I and III subunit K 796803 5.8 3.0
3.4
 6.7
 2.9
 2.6
 2.1
 -0.3
 4.5
 5.0
 3.9
33 lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated 563948 5.7 3.0
4.5
 5.8
 6.1
 0.7
 6.1
 4.3
 7.0
 5.5
 -0.8
34 lamtor3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 553597 5.7 3.0
0.5
 0.1
 -0.3
 -0.6
 1.4
 2.6
 3.0


35 btf3l4 basic transcription factor 3-like 4 393667 5.6 2.9
6.4
0.2
 4.6
-0.4
 4.6
2.3
 2.3
1.0
 1.7
1.7
 2.4
0.4
 2.9
-0.3
 5.3
 0.3
-0.6
36 eny2 ENY2 transcription and export complex 2 subunit 436700 5.6 4.4
 0.7
 3.2
 2.4
 2.9
 1.5
 3.9
 2.8
 8.9
0.7
4.2
37 smx5 smx5 57924 5.6 4.5
 0.6
 4.9
 3.4
 4.4
5.0
 2.5
-1.0
 10.0
 5.9
 2.6
38 tomm6 translocase of outer mitochondrial membrane 6 homolog (yeast) 100001229 5.6 2.9
10.4
 8.1
1.2
5.1



39 arl14ep ADP-ribosylation factor-like 14 effector protein 751672 5.6 2.9
1.4
 -0.9
 -0.8
 -1.3
 1.1
 1.0
 4.6
 -0.7
0.1
40 dpcd deleted in primary ciliary dyskinesia homolog (mouse) 751660 5.4 2.9
2.7
 4.3
 4.0
 2.3
 7.1
 0.5
 3.3


41 polr2h RNA polymerase II, I and III subunit H 550263 5.4 2.8
3.1
 5.8
 2.8
 -0.7
 3.9
 5.5
 7.2
 5.1
 -0.2
 0.2
42 sarnp SAP domain containing ribonucleoprotein 554106 5.3 2.8
5.5
 4.2
 3.4
 5.9
 4.3
 0.2



43 cox20 cytochrome c oxidase assembly factor COX20 436985 5.3 2.8
0.6
1.4
 -0.2
2.2
 0.8


44 npm3 nucleophosmin/nucleoplasmin, 3 541357 5.2 3.7
 1.1
 4.6
3.6
 5.8
2.5
 5.6
3.7
 4.0
2.3
 3.4
2.3
 6.1
4.1
 9.5
7.5


45 trmt112 tRNA methyltransferase activator subunit 11-2 553790 5.2 4.7
 0.1
 8.4
 5.1
 7.5
7.2
 5.9
 4.1
 3.3
 0.1
46 ssna1 Sjogren syndrome nuclear autoantigen 1 561124 5.2 2.7
2.7
 5.8
 4.9
 0.7
-0.6
 2.9
 4.2



47 yeats4 YEATS domain containing 4 437025 5.1 2.7
0.4
 0.9
 0.7
 -0.1
 -0.1
 -0.2
 5.0
 2.6
 3.2
48 srp14 signal recognition particle 14 619260 5.1 2.7
5.4
 5.9
 2.0
 0.9
 5.3
 2.6
2.0
 3.4
 2.4

49 snrnp200 small nuclear ribonucleoprotein 200 (U5) 799690 5.1 2.7
2.9
0.1
 1.9
0.4
 1.8
-0.2
 4.0
-1.2
 0.2
 0.4
-1.2
 1.7
-1.0
 1.7
0.5
 0.2
-0.5
 -1.3
50 seta SET nuclear proto-oncogene a 323501 5.1 4.1
 0.6
 2.1
 3.8
 2.4
 3.8
 2.6
 -0.0
-1.2
 8.0
 1.3

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