Orthologous genes in OrthoFinder**

Species Gene Description
 rno-u.3   Vps13d   vacuolar protein sorting 13 homolog D 
 rno-r.3   Vps13d   vacuolar protein sorting 13 homolog D 
 rno-m.5   Vps13d   vacuolar protein sorting 13 homolog D 
 mmu-u.4   Vps13d   vacuolar protein sorting 13D 
 hsa-u.4   VPS13D   vacuolar protein sorting 13 homolog D 
 mcc-u.3   VPS13D   vacuolar protein sorting 13 homolog D 
 cfa-u.3   VPS13D   vacuolar protein sorting 13 homolog D 
 gga-u.3   VPS13D   vacuolar protein sorting 13 homolog D 
 dre-u.3   vps13d   vacuolar protein sorting 13 homolog D 
 dme-u.3   Vps13D   Vacuolar protein sorting 13D 
 cel-u.3   C25H3.11   Ricin B-type lectin domain-containing protein 
 spo-u.3   vma16   putative V-type ATPase V0 subunit c'' 

close


Top 50 coexpressed genes to Vps13d (rno-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 rno310   Lysine degradation  3 60 3.10
 rno4120   Ubiquitin mediated proteolysis  2 145 -
 rno5165   Human papillomavirus infection  2 353 -
 rno5014   Amyotrophic lateral sclerosis  2 370 -
 rno5022   Pathways of neurodegeneration - multiple diseases  2 477 -

close


rno:Vps13d (vacuolar protein sorting 13 homolog D) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

rno-u.3
for
Vps13d
rno-r.3
for
Vps13d
rno-m.5
for
Vps13d
mmu-u.4
for
Vps13d
hsa-u.4
for
VPS13D
mcc-u.3
for
VPS13D
cfa-u.3
for
VPS13D
gga-u.3
for
VPS13D
dre-u.3
for
vps13d
dme-u.3
for
Vps13D
cel-u.3
for
C25H3.11
spo-u.3
for
vma16
1 Nsd1 nuclear receptor binding SET domain protein 1 306764 10.4 8.5
 1.4
 6.1
4.5
 4.5
 1.8
 3.8
1.7

-0.2
2 Ino80d INO80 complex subunit D 316440 10.4 5.7
7.0
 4.5
 1.5
 4.1
 2.7
 2.4


3 Smg1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase 691397 10.4 5.7
5.1
 7.8
 5.9
 8.0
 4.9
 4.4
 5.0
 10.5
4 Chd9 chromodomain helicase DNA binding protein 9 307726 9.7 5.3
6.4
5.3
 5.9
4.7
 3.5
3.2
 3.8
3.2
 3.8
3.0
 3.2
2.5
 6.6
 6.2
5 Rnf213 ring finger protein 213 303735 9.5 5.2
6.1
 6.6
 4.4
 2.9
 0.8
 4.2


6 Kmt2c lysine methyltransferase 2C 502710 8.9 7.3
 1.1
 8.6
 7.7
 6.6
 5.5
 5.6
 7.2
3.4
 1.6
 4.3
7 Zzef1 zinc finger ZZ-type and EF-hand domain containing 1 287476 8.8 6.6
 1.8
 5.1
 6.3
 4.9
 3.4
 3.5
 6.8


8 Epg5 ectopic P-granules autophagy protein 5 homolog 364902 8.7 4.8
10.1
 6.3
 4.6
 3.5
 3.9
 5.7
 8.4
 4.2
9 Ankhd1 ankyrin repeat and KH domain containing 1 100529260 8.7 4.7
4.3
3.6
 6.5
3.6
 5.6
3.6
 2.5
-0.2
 3.6
2.7
 2.2
 4.8
 9.0
10 Vps13a vacuolar protein sorting 13 homolog A 309243 8.3 4.5
7.2
4.9
 5.9
4.2
 3.6
1.7
 3.3
2.9
 3.5
3.5
 4.6
3.8
 7.0
 10.2
 -0.6
11 Phc3 polyhomeotic homolog 3 310258 8.2 4.5
5.9
 2.9
 3.4
 3.1
 1.0
 -0.3


12 LOC100361083 hypothetical LOC100361083 100361083 8.0 4.4
5.7
 3.8





-2.3
13 Atm ATM serine/threonine kinase 300711 8.0 4.3
5.2
5.2
3.6
 2.3
 6.6
 5.3
14 Vps13b vacuolar protein sorting 13 homolog B 315036 7.7 5.2
 2.2
 6.4
 5.7
 4.4
 1.4
 3.7
 1.9
 6.3

15 Htt huntingtin 29424 7.5 6.9
 0.2
 5.6
 8.0
 4.1
 4.8
 4.9
 4.6
 6.4

16 Zbed6 zinc finger, BED-type containing 6 103693666 7.3 4.0
6.1
 3.2
 4.7
 2.6




17 Tnks tankyrase 290794 7.2 3.9
3.6
2.1
 4.5
2.3
 3.6
1.7
 3.5
1.4
 1.6
0.6
 1.2
1.1
 -0.1

18 Setx senataxin 362096 7.2 3.9
2.1
 4.3
 3.8
 2.1
 3.5
 3.0

0.4
19 Smcr8 SMCR8-C9orf72 complex subunit 497918 7.1 3.9
4.5
 2.2
 2.0
 0.1
 0.6
 1.6
0.9
1.2
20 Zfp236 zinc finger protein 236 291409 7.0 3.8
6.4
 3.8
 5.3
 4.4
 3.6
 3.6
 -0.9
-2.9
 0.1
 0.4
21 Mib1 MIB E3 ubiquitin protein ligase 1 307594 7.0 3.8
3.2
0.5
2.1
0.3
 2.3
0.8
 2.7
-0.8
 3.2
-0.6
 1.0
-1.5
 1.1
22 Vps13c vacuolar protein sorting 13 homolog C 363087 7.0 5.9
 0.7








23 Lmbrd2 LMBR1 domain containing 2 499539 6.9 3.8
5.0
 1.8
 2.7
 0.4
 0.2
 1.7
1.6
0.0
 -0.7
24 Lrba LPS responsive beige-like anchor protein 361975 6.7 4.6
 1.8
4.9
1.5
 2.5
1.5
 2.0
1.8
 2.0
0.4
 3.0
1.5
9.2
 -1.2
25 Chd8 chromodomain helicase DNA binding protein 8 65027 6.7 5.2
 1.2
 6.4
5.3
 5.9
4.7
 3.5
3.2
 3.8
3.2
 3.8
3.0
 3.2
2.5
 6.6
 6.2
26 Herc2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 308669 6.7 4.4
 2.0
 6.7
 8.5
 5.2
 4.7
 5.0
 3.3
 4.0

27 Dst dystonin 316313 6.6 5.2
 1.1
 5.5
 8.4
 4.0
3.9
 5.0
0.9
 3.0
2.5
 3.7
2.2
 2.3

28 Ubr3 ubiquitin protein ligase E3 component n-recognin 3 311115 6.6 4.4
 1.9
 5.9
 4.0
 5.4
 0.3
 3.9
 3.7
 2.6
 7.3
29 Hectd4 HECT domain E3 ubiquitin protein ligase 4 304503 6.5 4.2
 2.0
 5.6
 9.0
 6.3
 7.3
 5.4
 5.0


30 Ash1l ASH1 like histone lysine methyltransferase 310638 6.5 5.8
 0.4
 8.0
6.7
 7.4
 3.1
 5.2
 3.8
 1.4
31 Dcp2 decapping mRNA 2 291604 6.4 3.5
0.8
 0.8
 0.4
 0.5
 0.9
 1.0
 3.0
 2.2
 0.4
32 Gan gigaxonin 307893 6.3 3.5
4.2
 4.2
 1.7
 -0.2
 0.4
 0.2


33 Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase 304883 6.2 3.4
2.6
 2.0
 2.4
 2.1
 0.2
 1.7


34 Ubr4 ubiquitin protein ligase E3 component n-recognin 4 313658 6.1 3.7
 2.1
 6.6
 12.3
 8.5
 10.6
 6.4
 9.1
 10.6
 14.2
35 Dennd1b DENN domain containing 1B 289051 6.0 3.3
3.7
0.9
 0.4
 3.2
1.7
 1.9
0.9
 2.4
0.1
 4.1
1.5
 0.7
 1.6
36 Aak1 AP2 associated kinase 1 500244 6.0 3.4
 2.3
 6.0
1.0
 5.2
0.5
 3.0
2.3
 1.6
0.7
 2.9
-0.1
 2.1
0.7
 3.1
 4.7
37 Map3k2 mitogen activated protein kinase kinase kinase 2 171492 6.0 3.3
2.3
-0.8
 2.2
0.4
 3.7
0.4
 3.8
3.2
 1.7
1.2
 2.5
1.0


38 Tecpr2 tectonin beta-propeller repeat containing 2 314456 5.9 3.3
2.4
 3.7
 3.2
 1.1
 1.6
 1.9
 -1.4

39 Ubr1 ubiquitin protein ligase E3 component n-recognin 1 499877 5.9 3.8
 1.8
 5.9
5.2
 5.4
 5.3
4.1
 1.7
1.6
 5.6
3.3
 6.4
4.1
 1.9
 10.5
40 Ssh2 slingshot protein phosphatase 2 303342 5.8 3.2
1.8

1.5
 1.4
 1.6
0.9


41 Btbd7 BTB domain containing 7 362772 5.8 3.2


3.7
 0.5
 1.9
 2.3
 1.6
 0.2
42 Birc6 baculoviral IAP repeat-containing 6 313876 5.8 3.2
9.7
 9.1
 8.3
 5.4
 6.7
 4.6
 12.0
 0.9
43 Alms1 ALMS1, centrosome and basal body associated protein 297408 5.7 3.1
1.7
 4.4
 2.2
 4.9
 1.9



44 Prr14l proline rich 14-like 305466 5.7 5.0
 0.4
 4.7
 6.0
 4.3
 2.6




45 Dock4 dedicator of cytokinesis 4 366608 5.6 3.1
3.8
1.2
 2.2
2.2
 1.8
1.3
 2.4
1.7
 1.5
1.4
 2.5
1.3
 4.8
3.7
 9.0
46 Ralgapa2 Ral GTPase activating protein catalytic subunit alpha 2 296211 5.6 3.1
5.5
4.8
 4.2
4.1
 4.1
2.9
 2.7
1.6
 2.8
1.2
 3.2
2.3
 2.9
 2.8
 1.0
47 Bdp1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 294687 5.5 3.0
3.3
 3.1
 3.2
 2.6
 3.3
 1.9
0.2
 1.0
 3.3
 -1.3
48 Ltn1 listerin E3 ubiquitin protein ligase 1 288308 5.5 4.1
 1.2
 3.5
 2.0
 2.9
 -0.3
 6.8
 1.6
 11.2
 6.8
 -0.0
49 Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 498949 5.5 3.0
3.4
1.6
 2.1
1.6
 2.2
1.8
 1.2
0.0
 1.6
1.0
 3.4
0.7
50 Dip2b disco-interacting protein 2 homolog B 300231 5.5 3.0
3.7
2.9
 5.5
3.8
 2.2
1.7
 1.6
1.2
 3.1
2.3
 3.2
2.7
 5.4
 2.3
The preparation time of this page was 1.0 [sec].