Orthologous genes in OrthoFinder**

Species Gene Description
 gga-u.3  PTBP1  polypyrimidine tract binding protein 1 
 gga-r.3  PTBP1  polypyrimidine tract binding protein 1 
 gga-m.5  PTBP1  polypyrimidine tract binding protein 1 
 gga-u.3  PTBP2  polypyrimidine tract binding protein 2 
 hsa-u.4  PTBP3  polypyrimidine tract binding protein 3 
 hsa-u.4  PTBP2  polypyrimidine tract binding protein 2 
 hsa-u.4  PTBP1  polypyrimidine tract binding protein 1 
 mmu-u.4  Ptbp1  polypyrimidine tract binding protein 1 
 mmu-u.4  Ptbp2  polypyrimidine tract binding protein 2 
 mmu-u.4  Ptbp3  polypyrimidine tract binding protein 3 
 rno-u.3  Ptbp3  polypyrimidine tract binding protein 3 
 rno-u.3  Ptbp2  polypyrimidine tract binding protein 2 
 rno-u.3  Ptbp1  polypyrimidine tract binding protein 1 
 mcc-u.3  PTBP1  polypyrimidine tract binding protein 1 
 mcc-u.3  PTBP3  polypyrimidine tract binding protein 3 
 mcc-u.3  PTBP2  polypyrimidine tract binding protein 2 
 cfa-u.3  PTBP1  polypyrimidine tract binding protein 1 
 cfa-u.3  PTBP3  polypyrimidine tract binding protein 3 
 cfa-u.3  PTBP2  polypyrimidine tract binding protein 2 
 dre-u.3  ptbp2a  polypyrimidine tract binding protein 2a 
 dre-u.3  ptbp1a  polypyrimidine tract binding protein 1a 
 dre-u.3  ptbp3  polypyrimidine tract binding protein 3 
 dme-u.3  heph  hephaestus 
 cel-u.3  ptb-1  uncharacterized protein 

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Top 50 coexpressed genes to PTBP1 (gga-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 gga4530   Tight junction  6 147 5.21
 gga3040   Spliceosome  5 106 4.71
 gga4810   Regulation of actin cytoskeleton  4 184 2.59
 gga4144   Endocytosis  4 224 2.28
 gga5132   Salmonella infection  4 226 2.27

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gga:PTBP1 (polypyrimidine tract binding protein 1) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID
Other ID LINK Target Reference

gga-u.3
for
PTBP1


gga-r.3
for
PTBP1


gga-m.5
for
PTBP1


gga-u.3
for
PTBP2


hsa-u.4
for
PTBP3


hsa-u.4
for
PTBP2


hsa-u.4
for
PTBP1


mmu-u.4
for
Ptbp1


mmu-u.4
for
Ptbp2


mmu-u.4
for
Ptbp3


rno-u.3
for
Ptbp3


rno-u.3
for
Ptbp2


rno-u.3
for
Ptbp1


mcc-u.3
for
PTBP1


mcc-u.3
for
PTBP3


mcc-u.3
for
PTBP2


cfa-u.3
for
PTBP1


cfa-u.3
for
PTBP3


cfa-u.3
for
PTBP2


dre-u.3
for
ptbp2a


dre-u.3
for
ptbp1a


dre-u.3
for
ptbp3


dme-u.3
for
heph


cel-u.3
for
ptb-1

1 ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 420087 6.5 3.6
2.4
0.8
0.5
1.5
1.3
3.0
0.8
1.6
0.9
2.4
2.1
0.3
-0.1
1.5
1.5
1.8
0.8
0.5
-0.8
2.5
2.5
3.3
0.6
0.9
0.9
0.2
-0.6
2.3
0.8
1.5
1.1
-0.1
-0.2
3.5
3.4
2.1
1.1
0.6
0.5
2.5
-0.6
-0.8
2 SRSF1 serine and arginine rich splicing factor 1 772264 6.2 3.0
2.7
2.6
1.7
1.2
1.0
4.1
3.3
4.2
3.0
4.1
3.3
4.1
3.8
2.1
1.2
2.7
1.4
3.4
2.0
5.1
3.8
4.5
2.9
1.3
0.9
2.3
2.2
6.2
3.6
1.5
0.4
4.2
1.2
6.9
5.6
2.5
1.5
0.1
0.1
1.7
1.4
0.4
0.3
3 RANBP1 RAN binding protein 1 416787 5.3 2.7
2.2
2.8
-1.0
0.9
2.9
3.2
-0.4
0.5
0.1
-0.4
2.1
2.4
-1.2
0.3
3.1
-0.8
0.0
2.1
3.2
-0.6
1.2
-0.2
4 SRSF2 serine and arginine rich splicing factor 2 396195 5.2 2.8

2.5
0.3
-0.7
4.8
0.1
5.0
1.0
5.1
2.5
0.6
1.1
1.9
4.7
4.3
0.2
0.4
-0.9
0.6
0.5
4.4
0.2
0.3
5.3
2.5
2.5
2.3
0.7
-0.6
-0.4
-1.1
5 RAB8A RAB8A, member RAS oncogene family 428352 5.2 3.4
1.4
1.1
0.2
2.9
1.6
1.1
0.4
5.3
-0.1
2.2
0.2
1.9
0.1
3.9
3.3
2.5
2.1
0.1
-0.6
4.1
0.4
3.8
0.6
3.4
2.2
2.5
-0.1
4.3
1.1
3.8
2.0
0.3
0.2
2.0
-0.8
3.1
2.3
1.7
0.7
0.8
-1.2
0.3
-0.9
6 UHRF1 ubiquitin like with PHD and ring finger domains 1 420154 5.2 2.2
2.6
0.7
-1.6
0.3
2.2
2.2
0.4
1.5
0.1
-0.4
1.8
2.2
-0.2
-0.9
3.5
-0.5
-1.3
0.9
1.8
-0.4


7 CAP1 cyclase associated actin cytoskeleton regulatory protein 1 419680 5.1 3.3
1.5
1.0
-0.1
3.3
-0.5
1.7
-0.1
2.3
-1.2
2.6
-0.9
0.9
-0.9
3.5
-1.4
3.4
-1.3
1.3
-0.9
2.6
-1.8
0.3
-1.7
5.4
-0.5
0.6
-1.1
0.4
-1.6
-0.2
-0.5
1.8
-0.7
0.2
-2.8
-0.9
-1.9
0.7
-0.9
-0.6
1.2
-0.9
8 CTBPL C-terminal binding protein-like 416354 5.1 3.5
1.3
0.9
-0.1
1.6
1.5
1.6
1.5
2.6
0.6
1.7
1.7
2.0
1.1
0.2
2.2
-0.1
0.6
0.4
1.6
0.4
1.2
-0.4
2.6
0.8
0.2
-1.0
2.0
1.7
-0.5
-1.1
-0.9
-1.5
2.1
-0.5
0.2
-0.4
1.1
0.6
2.2
2.0
9 ZNF207 zinc finger protein 207 417413 5.0 2.4
2.3
1.6
2.8
4.2
5.3
3.4
0.3
1.8
2.1
1.0
3.2
1.4
1.7
0.3
5.4
1.8
-0.4
4.4
1.7
2.5
0.9
0.5
0.2
4.4
-0.0
10 ACTR3 ARP3 actin related protein 3 homolog 374197 5.0 3.9
0.8
0.2
-0.2
4.7
-0.8
0.6
0.6
0.8
0.7
1.8
-1.8
1.2
-0.5
5.7
-0.9
3.3
-0.9
1.0
0.4
0.7
-1.5
-0.7
-0.9
5.8
-1.1
0.6
-0.3
1.2
-0.7
5.3
-2.1
1.6
0.5
0.3
-1.2
0.5
-0.9
1.3
-0.1
0.2
1.7
11 FUBP1 far upstream element binding protein 1 424551 5.0 2.2
2.4
1.9
0.0
1.2
0.9
5.1
0.1
8.5
5.0
3.7
3.5
1.0
0.9
2.0
1.7
2.0
1.4
1.4
-0.2
4.9
2.8
5.0
2.7
1.6
0.5
0.2
-0.3
5.6
2.2
1.6
0.4
1.7
1.6
4.1
3.0
2.7
0.5
1.0
-0.4
4.1
2.2
1.7
12 SF3B3 splicing factor 3b subunit 3 415680 5.0 2.9
1.7
0.2
0.6
0.5
4.5
5.8
0.9
0.7
0.6
0.7
4.4
3.8
0.6
-1.0
4.1
0.4
0.3
1.2
2.1
0.3
-0.5
-0.3
13 AQR aquarius intron-binding spliceosomal factor 423296 4.9 2.2
2.4
1.4
3.0
1.0
1.9
1.8
-1.7
1.1
1.0
1.1
2.1
2.2
1.7
1.5
1.8
0.5
0.5
1.3
0.9
0.6
-0.6
0.9
14 VGLL4 vestigial like family member 4 415962 4.9 2.3
2.3
1.9
0.0
-1.0
1.7
0.7
-1.3
0.4
0.6
0.0
0.1
2.3
0.9
-0.6
1.4
-0.0
-0.2
0.3
3.7
0.3


15 CAND1 cullin associated and neddylation dissociated 1 417837 4.7 2.0
2.4
2.0
-0.5
2.1
-2.4
2.1
0.7
1.2
-0.7
1.8
1.2
0.6
0.3
-0.0
-1.4
0.2
-0.6
1.0
0.3
3.8
-0.0
2.5
-0.2
0.5
-0.4
1.9
1.9
-0.4
-0.7
1.0
-2.2
1.5
1.1
1.9
-0.3
2.2
-0.5
0.7
-0.9
1.6
-0.8
16 POLE3 DNA polymerase epsilon 3, accessory subunit 417275 4.7 2.5

-0.6
1.9
0.5
2.2
1.5
0.3
0.7
1.5
-1.8
2.6
2.1
-0.9
-0.4
0.6
1.1
-1.2
2.1
0.7
0.4
0.1
-0.6
17 CCAR1 cell division cycle and apoptosis regulator 1 423692 4.7 2.3
2.1
1.5
0.7
4.2
3.0
1.9
1.8
0.9
2.5
1.0
1.8
1.7
0.4
0.9
1.8
0.7
2.3
-0.2
2.9
-0.4


18 LMNB2 lamin B2 396222 4.7 2.6
1.8
0.8
0.3
1.4
0.2
0.9
-0.2
5.1
2.1
2.7
2.5
0.2
-0.7
1.1
0.6
0.2
0.1
-0.4
-0.5
2.9
2.8
5.5
3.3
2.6
-0.2
-0.4
-1.2
3.7
3.4
3.7
-1.1
1.0
-1.8
3.3
2.0
1.8
1.2
0.4
-0.2
2.4
0.6
1.0
19 NOLC1 nucleolar and coiled-body phosphoprotein 1 423755 4.6 1.9
2.4
0.7
0.6
-1.1
3.6
3.0
-1.2
-1.4
0.9
-0.3
3.6
3.4
0.6
0.1
4.4
0.2
-0.4
3.0
1.8
-0.1

0.6
20 PGD phosphogluconate dehydrogenase 419450 4.6 2.1
2.1
-0.7
1.3
-0.3
1.0
2.0
-0.3
1.1
1.0
-2.9
2.2
1.3
2.9
-2.4
0.9
-0.2
-2.4
-0.3
1.6
0.1
-0.4
-0.7
21 PWP2 PWP2 small subunit processome component 107055627 4.6 2.5

1.5
-0.0
-0.1
1.4
2.2
-0.3
-0.6
0.2
-0.1
1.5
3.0
-0.4
0.7
5.0
-1.2
0.5
0.1
2.1
-1.3
-0.4
-0.2
22 ARCN1 archain 1 770561 4.6 2.2
2.1
-1.1
1.6
-2.3
1.7
2.0
-0.5
2.3
2.0
-0.8
2.9
4.3
0.9
-1.4
3.7
1.9
-1.0
-0.0
-0.2
2.1
0.1
-1.3
-1.7
-1.1
-1.1
23 CTNNA1 catenin alpha 1 416184 4.6 2.9
1.3
-0.1
-0.5
0.6
-0.8
0.1
-0.7
1.4
0.0
1.8
0.1
1.3
0.7
1.5
-0.3
1.9
-0.5
0.7
-0.7
3.2
-0.3
1.8
-0.3
0.4
-1.0
0.6
0.5
2.5
-1.0
1.9
-0.4
-0.1
-1.0
0.7
-0.2
1.8
-0.4
-0.2
-0.6
1.6

24 SEC24C SEC24 homolog C, COPII coat complex component 423742 4.5 2.0
2.2
-0.1
-1.0
0.8
0.7
-0.7
-1.0
1.2
0.4
1.9
1.6
0.0
-1.1
0.4
0.4
0.9
-0.6
-1.0
-1.2
3.5
2.6
3.3
0.2
0.8
-0.6
-0.7
-2.3
1.6
0.2
0.3
-0.1
0.9
-0.7
-0.6
-1.4
3.9
0.1
1.0
-1.0
0.5
0.3
25 SET SET nuclear proto-oncogene 417210 4.5 2.8
1.4
0.5
3.6
1.4
2.1
2.6
0.1
1.7
4.6
-0.9
2.2
0.2
3.6
1.5
2.0
0.0
0.6
-0.1
0.8
0.7
4.2
3.3
2.2
2.1
0.8
-0.2
0.7
-1.6
26 DDX46 DEAD-box helicase 46 416312 4.5 2.4
1.8
0.7
0.9
-0.1
2.8
2.6
0.6
1.2



1.4
1.2
0.7
2.1
2.4
1.9
2.1
-1.1
-0.1
-0.6

27 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta 419190 4.4 2.3
1.9
1.4
1.2
2.7
1.7
2.5
1.9
2.7
2.0
2.9
2.2
2.0
1.7
4.6
1.7
2.4
2.3
1.7
1.6
3.3
3.1
1.9
1.0
5.4
4.4
2.2
1.8
2.4
2.2
2.2
1.3
2.4
1.6
2.9
2.3
3.6
2.1
3.1
2.0
3.0
1.4
1.6
-1.2
28 SFPQ splicing factor proline and glutamine rich 395803 4.4 1.7
2.4
0.5
0.5
0.6
0.4
4.5
4.0
5.8
5.6
4.5
3.8
4.3
1.0
1.8
1.0
1.5
0.9
4.8
2.1
4.3
3.8
4.3
3.7
1.1
0.1
1.3
1.1
5.5
3.4
1.2
0.9
3.5
2.3
3.7
2.4
3.0
0.7
0.4
-1.3
3.4
1.3

29 EIF4A3 eukaryotic translation initiation factor 4A3 416704 4.4 2.2
1.9
2.1
1.9
0.1
-0.2
2.5
-0.4
4.2
-0.9
5.6
4.5
2.6
0.4
1.7
-0.1
1.8
0.3
3.4
0.6
4.0
3.3
3.4
2.3
0.7
0.0
2.8
0.2
4.7
3.6
1.3
-0.4
1.9
-0.9
3.0
1.6
1.4
0.9
0.4
-0.2
1.5
-0.6
1.1
0.7
30 TCOF1 treacle ribosome biogenesis factor 1 416276 4.4 2.2
1.9
-0.4
-0.7
-0.1
3.8
3.3
-1.7
-0.3
-0.4
-0.5
2.7
4.1
-1.1
-1.1
1.7
-0.9
-1.2





31 NDC1 NDC1 transmembrane nucleoporin 772284 4.4 1.8
2.2
0.3
2.3
2.0
1.3
1.4
0.8
1.2
1.9
-0.5
2.2
0.5
1.4
2.0
1.2
0.3
-0.0
1.9
0.2
-0.5
0.5
-0.3
-0.6
32 UPF1 UPF1, RNA helicase and ATPase 420119 4.3 2.2
1.8
0.9
0.7
-0.3
5.5
1.9
-0.5
0.0
1.1
-1.0
3.8
3.6
0.4
-0.2
5.0
0.0
-0.2
1.4
1.8
0.0
1.8
0.7
33 CCT2 chaperonin containing TCP1 subunit 2 417846 4.3 1.3
2.7
1.3
-0.0
0.9
2.3
2.3
0.7
0.5
-1.3
0.7
1.6
2.9
0.4
1.5
1.5
-1.3
1.0
-0.3
0.5
0.3
0.3
-0.9
34 CCND1 cyclin D1 396341 4.3 2.3
1.8
-0.4
-1.2
0.4
0.2
-0.7
-1.0
1.0
1.0
3.4
1.4
-0.0
-1.3
1.4
-0.4
1.9
1.7
-1.7
-2.1
2.5
2.2
0.9
0.2
1.8
0.5
0.3
-1.9
1.2
-0.1
-0.1
-0.8
-0.5
-0.6
1.5
-0.2
3.5
2.7
4.0
1.7
0.7
-0.5
35 MAPRE1 microtubule associated protein RP/EB family member 1 419288 4.3 2.0
2.0
0.3
-0.7
2.4
0.5
1.4
0.9
3.5
0.8
2.2
0.8
1.1
0.7
2.9
-0.4
2.5
-1.1
1.8
0.3
4.2
0.2
3.0
1.3
1.9
0.7
2.2
1.0
2.3
-0.9
2.5
-1.9
2.0
1.4
3.2
2.0
2.1
1.8
1.1
0.5
2.9
0.7
0.4
0.1
36 TRABD TraB domain containing 417746 4.3 2.3
1.7
-0.1
0.5
2.0
1.4
1.5
-0.1
0.9
-0.1
-2.1
1.9
1.7
-1.1
-0.3
3.1
-0.5
-1.2
-2.1
2.4
-1.5
2.4
1.2
37 CRLF3 cytokine receptor like factor 3 417407 4.3 2.4
1.6
-1.8
5.1
0.2
1.0
0.7
-1.4
2.2
1.1
-0.8
0.2
-0.8
1.2
0.2
-1.3
1.3
2.1
0.8
0.9
1.4


38 SRSF11 serine and arginine rich splicing factor 11 424714 4.3 2.5
1.5
2.4
0.1
7.9
2.1
1.9
4.1
0.9
0.9
3.6
1.7
-1.1
1.9
2.9
1.6
-0.2
6.3
4.5
-0.9
-0.5


39 DDX49 DEAD-box helicase 49 420116 4.3 2.8
1.2
-0.9
-1.5
-0.6
2.3
2.1
-0.5
-0.8
-0.1
-0.6
1.7
1.4
-0.3
0.3
2.5
-1.5
-1.8
0.8
-0.4
-0.8
0.5
-0.2
40 GOLGA7 golgin A7 426787 4.2 2.6
1.4
0.7
0.1
1.4
0.8
1.0
-0.8
0.3
-0.8
0.8
-0.6
0.6
0.4
2.0
-0.2
1.6
-1.5
0.6
-0.5
1.9
-1.4
1.4
0.4
-0.1
-0.9
0.0
-1.0
-1.1
1.3
-0.3
3.5
0.9
1.4
1.1
0.9
0.6
0.7
0.3
41 HDAC1 histone deacetylase 1 373961 4.2 2.5
1.5
1.0
0.4
2.0
1.4
1.6
0.2
3.5
2.9
4.2
1.1
1.1
0.9
2.0
0.7
1.7
0.6
2.5
1.2
5.4
2.9
3.4
1.4
2.9
2.2
2.0
-0.3
1.9
1.8
1.4
1.3
2.2
0.4
2.8
2.5
2.7
1.4
0.2
-0.5
0.3
0.6
-0.1
42 ARFIP1 ADP ribosylation factor interacting protein 1 770884 4.2 2.3

1.2
-0.9
2.4
-1.1
-0.1
-0.6
1.1
-0.6
1.7
1.2
1.8
0.2
2.9
-1.7
3.3
-1.6
2.2
-0.1
0.9
-0.3
1.3
1.0
2.3
-1.2
1.0
-0.2
1.2
-0.8
2.4
-0.9
-0.5
-0.6
-0.5
-1.1
1.7
1.5
3.3
0.0
0.3
-0.2
43 HNRNPM heterogeneous nuclear ribonucleoprotein M 420054 4.2 2.5
1.5
2.5
0.9
-0.0
-0.5
1.9
1.1
5.2
-0.5
3.6
1.3
2.5
0.8
1.1
-0.5
1.0
-0.1
6.4
-0.1
3.9
1.9
5.8
1.2
0.8
-1.4
2.7
-0.3
6.9
-0.5
0.1
-0.2
2.4
0.7
3.0
2.5
-1.0
-1.2
0.3
-1.0
1.6
-0.5
44 ACTB actin, beta 396526 4.2 2.7
1.2
2.7
1.7
3.5
2.7
0.9
0.7
4.6
4.1
2.7
2.4
1.2
1.0
2.8
1.6
3.5
0.7
0.7
0.3
4.3
1.1
3.5
2.9
2.6
1.5
1.5
1.5
3.8
3.8
1.1
0.7
0.9
0.8
1.8
0.8
1.7
0.8
1.8
1.7
1.3
0.5
1.6
1.1
45 ARPC2 actin related protein 2/3 complex subunit 2 429041 4.2 2.5
1.3
0.4
3.0
-0.2
-0.6
0.9
-0.7
4.7
1.9
-1.0
0.4
-1.1
2.9
-1.2
0.6
2.9
-0.9
0.9
1.1
1.5
0.5
0.0
46 PPP1R8 protein phosphatase 1 regulatory subunit 8 419564 4.2 2.5
1.4
1.7
0.6
2.6
1.6
2.6
0.5
-0.3
-0.3
0.2
1.0
0.5
1.1
-0.7
3.2
-0.1
-0.8
2.3
-0.3
1.8
0.4
0.9
-0.3
1.3
0.1
47 FAM60A family with sequence similarity 60 member A 418140 4.1 2.6
1.3
1.1
2.7
1.5
1.8
3.1
0.7
1.9
2.5
-0.7
4.6
2.5
2.1
1.1
3.0
4.0
1.3
4.7
-0.3
1.5
0.6
0.5
0.1
1.7

48 TICAM1 toll like receptor adaptor molecule 1 100008585 4.1 2.4
1.4
-1.7



0.5
-0.8
-0.2
1.3
-0.5
-1.2
0.8
0.5
-1.1
0.4
1.7
-1.9
-0.9
-0.7
0.7


49 RHOA ras homolog family member A 395442 4.1 2.7
1.2
0.7
0.6
2.7
0.1
0.5
-0.3
2.1
0.4
3.1
0.3
0.6
0.4
5.3
0.9
1.9
0.9
0.7
0.2
2.1
1.7
1.4
-0.2
2.9
1.5
0.7
-0.2
2.6
0.7
0.7
0.2
-0.4
-1.3
2.3
0.8
2.3
1.2
1.4
0.3
1.6
2.6
50 GATAD2A GATA zinc finger domain containing 2A 420109 4.1 2.5
1.4
0.5
-0.0
2.6
1.6
1.3
-0.3
5.6
2.2
4.9
1.6
1.6
0.4
2.4
1.7
1.0
1.0
0.5
-0.7
5.5
0.1
4.7
0.9
2.9
2.5
1.1
0.1
8.1
1.5
2.1
1.9
-0.7
-0.8
2.5
-2.4
1.5
-0.9
1.8
0.9
3.2
1.1
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