Orthologous genes in OrthoFinder**

Species Gene Description
 dre-u.3   snrnp200   small nuclear ribonucleoprotein 200 (U5) 
 dre-r.3   snrnp200   small nuclear ribonucleoprotein 200 (U5) 
 dre-u.3   ascc3   activating signal cointegrator 1 complex subunit 3 
 hsa-u.4   ASCC3   activating signal cointegrator 1 complex subunit 3 
 hsa-u.4   SNRNP200   small nuclear ribonucleoprotein U5 subunit 200 
 mmu-u.4   Ascc3   activating signal cointegrator 1 complex subunit 3 
 mmu-u.4   Snrnp200   small nuclear ribonucleoprotein 200 (U5) 
 rno-u.3   Ascc3   activating signal cointegrator 1 complex subunit 3 
 rno-u.3   Snrnp200   small nuclear ribonucleoprotein U5 subunit 200 
 gga-u.3   ASCC3   activating signal cointegrator 1 complex subunit 3 
 gga-u.3   SNRNP200   small nuclear ribonucleoprotein U5 subunit 200 
 mcc-u.3   SNRNP200   small nuclear ribonucleoprotein U5 subunit 200 
 cfa-u.3   ASCC3   activating signal cointegrator 1 complex subunit 3 
 cfa-u.3   SNRNP200   small nuclear ribonucleoprotein U5 subunit 200 
 dme-u.3   l(3)72Ab   lethal (3) 72Ab 
 dme-u.3   obe   obelus 
 cel-u.3   Y54E2A.4   SEC63 domain-containing protein 
 cel-u.3   snrp-200   Putative U5 small nuclear ribonucleoprotein 200 kDa helicase 
 sce-u.3   SLH1   putative RNA helicase 
 sce-u.3   BRR2   ATP-dependent RNA helicase BRR2 
 spo-u.3   spe1   putative ornithine decarboxylase Spe1 

close


Top 50 coexpressed genes to snrnp200 (dre-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 dre3040   Spliceosome  19 138 7.35
 dre3015   mRNA surveillance pathway  5 94 5.47
 dre3013   Nucleocytoplasmic transport  5 108 5.17
 dre4114   Oocyte meiosis  2 151 -
 dre4110   Cell cycle  2 154 -

close


dre:snrnp200 (small nuclear ribonucleoprotein 200 (U5)) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

dre-u.3
for
snrnp200
dre-r.3
for
snrnp200
dre-u.3
for
ascc3
hsa-u.4
for
ASCC3
hsa-u.4
for
SNRNP200
mmu-u.4
for
Ascc3
mmu-u.4
for
Snrnp200
rno-u.3
for
Ascc3
rno-u.3
for
Snrnp200
gga-u.3
for
ASCC3
gga-u.3
for
SNRNP200
mcc-u.3
for
SNRNP200
cfa-u.3
for
ASCC3
cfa-u.3
for
SNRNP200
dme-u.3
for
l(3)72Ab
dme-u.3
for
obe
cel-u.3
for
Y54E2A.4
cel-u.3
for
snrp-200
sce-u.3
for
SLH1
sce-u.3
for
BRR2
spo-u.3
for
spe1
1 prpf8 pre-mRNA processing factor 8 393951 18.1 9.4
 3.7
 1.8
 18.9
 1.2
 16.6
 1.1
 12.8
 2.2
 11.9
 15.9
 1.0
 11.8
 13.1
 5.6
 1.8
 10.2
 5.3
 11.0
 3.1
2 tprb translocated promoter region b, nuclear basket protein 558883 10.7 5.6
 6.2
5.3
 3.1
 4.9
 5.0
 4.4
 4.6
 6.7
 6.2
 4.3
 3.2
 3.7
 2.5
 8.5
 3.3

4.0
2.7
 3.2
2.5
3 tpra translocated promoter region a, nuclear basket protein 571089 10.5 5.5
 6.2
5.3
 3.1
 4.9
 5.0
 4.4
 4.6
 6.7
 6.2
 4.3
 3.2
 3.7
 2.5
 8.5
 3.3

4.0
2.7
 3.2
2.5
4 prpf6 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) 323855 10.2 5.3
 3.5
 0.1
 7.7
 1.3
 7.4
 0.7
 7.4
 1.1
 4.6
 4.9
3.7
 -1.1
 4.4
 5.7
 3.9
 1.8
 7.4
 1.8
 3.3
 1.0
5 ddx23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 334283 9.8 5.1
 0.8
 0.5
 6.6
 0.6
 2.4
 -0.8
 4.7

7.2
 -1.0
 6.4
 7.6
 2.3
 0.4
 4.2
 0.4
 1.3
 -0.5
6 dhx8 DEAH (Asp-Glu-Ala-His) box polypeptide 8 606595 9.6 5.0
 2.5
2.4
 1.8
1.4
 7.2
6.7
 2.2
2.0
 5.7
5.4
 2.7
2.0
 5.0
4.3
 2.6
1.5
 6.9
4.8
 7.9
4.0
 3.1
1.2
 5.7
5.2
 6.0
2.8
 4.3
2.9
 2.7
2.2
 6.9
5.3
 4.2
1.8
 5.2
3.0
7 aqr aquarius intron-binding spliceosomal factor 393436 9.3 4.8
 3.6
 3.5
 5.6
 4.3
 5.8
 1.4
 6.0
 6.9
 4.7
 4.1
 3.1
 4.0
 8.8
 3.4
 2.8
 6.0


8 sf3b3 splicing factor 3b, subunit 3 406824 8.8 4.6
 1.2
 1.8
 8.2
 0.3
 6.6
 0.4
 6.0
 0.5
 10.1
 4.9
 2.0
 4.1
 4.1
 1.7
 0.2
 7.6
 2.1
 1.6
 1.1
0.8
9 eftud2 elongation factor Tu GTP binding domain containing 2 393480 8.7 4.5
 1.3
 0.0
 7.5
 -0.3
 8.4
 0.4
 7.0
 1.0
 10.5
 6.4
 0.2
 3.6
 6.4
 1.6
 1.3
 5.4


10 ilf3b interleukin enhancer binding factor 3b 321868 8.5 4.4
 2.3
 1.1
 7.6
 1.1
 4.3
 -0.4
 2.8
 -0.5
 3.7
 5.8
 0.6
 5.4






11 dhx38 DEAH (Asp-Glu-Ala-His) box polypeptide 38 393850 8.4 4.4
 2.5
2.4
 1.8
1.4
 7.2
6.7
 2.2
2.0
 5.7
5.4
 2.7
2.0
 5.0
4.3
 2.6
1.5
 6.9
4.8
 7.9
4.0
 3.1
1.2
 5.7
5.2
 6.0
2.8
 4.3
2.9
 2.7
2.2
 6.9
5.3
 4.2
1.8
 5.2
3.0
12 zc3h18 zinc finger CCCH-type containing 18 555770 8.3 4.3
 5.0

0.9
 2.4
 0.3
 3.0
 -0.5
 6.0
 3.7
 0.1
 3.8
 1.9
 -0.5




13 smc3 structural maintenance of chromosomes 3 324475 8.1 4.2
 2.4
 0.9
 2.3
 1.5
 3.9
 0.9
 3.6
 0.6
 2.6
 1.2
 1.8
 0.7
 3.2
 1.8
 2.3
 5.8
 2.2
 1.7
14 prpf39 PRP39 pre-mRNA processing factor 39 homolog (yeast) 368864 8.0 4.2
 1.1
-0.5
 0.1
 -0.2
 0.8
 -1.9
 0.0
 -1.5

-0.2
 1.7
 0.0
 4.4
 -0.1
 -0.3
 2.3
 1.1
 1.3
 0.8
15 sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP 436946 8.0 4.2
 0.4
 -0.0
 5.7
 -0.9
 4.5
 -0.6
 4.1

3.2
 -0.9
 3.6
 6.4
 4.4
 0.2
 3.9
 1.3
 1.5
16 smarcc1a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a 403020 8.0 4.2
 4.6
0.7
 1.7
-0.9
 5.5
4.7
 0.9
-1.5
 2.9
2.5
 0.6
-1.4
 2.5
1.4
 -0.5
-2.0
 4.7
4.0
 4.5
2.3
 3.0
-1.8
 4.0
3.0
 4.7
 0.5
 2.5
 5.2
 0.1
-0.2
 0.8
-0.8
17 dhx16 DEAH (Asp-Glu-Ala-His) box polypeptide 16 336645 8.0 4.2
 2.5
2.4
 1.8
1.4
 7.2
6.7
 2.2
2.0
 5.7
5.4
 2.7
2.0
 5.0
4.3
 2.6
1.5
 6.9
4.8
 7.9
4.0
 3.1
1.2
 5.7
5.2
 6.0
2.8
 4.3
2.9
 2.7
2.2
 6.9
5.3
 4.2
1.8
 5.2
3.0
18 dhx15 DEAH (Asp-Glu-Ala-His) box helicase 15 321931 7.9 4.1
 2.5
2.4
 1.8
1.4
 7.2
6.7
 2.2
2.0
 5.7
5.4
 2.7
2.0
 5.0
4.3
 2.6
1.5
 6.9
4.8
 7.9
4.0
 3.1
1.2
 5.7
5.2
 6.0
2.8
 4.3
2.9
 2.7
2.2
 6.9
5.3
 4.2
1.8
 5.2
3.0
19 prpf31 PRP31 pre-mRNA processing factor 31 homolog (yeast) 393476 7.7 4.0
 -0.1
 0.1
 4.4
 -0.3
 2.5
 -1.1
 4.4

3.8
 -0.7
 2.2
 5.9
 3.0
 -0.2
 3.7
 1.6
 0.3
 0.2
20 sf3b2 splicing factor 3b, subunit 2 570994 7.7 4.0
 2.6
 0.6
 8.7
 -0.1
 7.4
 0.2
 7.6

8.8
 -0.9
 6.4
 4.8
 0.7
 1.8
 7.0
 -0.4
 0.3
 -0.6
21 polr2b RNA polymerase II subunit B 100149268 7.7 4.0
 1.6
 0.8
 5.6
 0.7
 9.9
 1.7
 8.0
 2.0
 2.5
 4.4
 3.0
 3.5
 9.8
 4.1
 1.6
 8.0
 3.5
 4.7
 -0.4
22 cactin cactin 100126813 7.7 4.0
 1.8
 1.1
 0.5
 -0.1
 0.6
 -0.2
 1.5
 -1.1
 2.1
 2.5
 -1.5
 2.7
 3.9
 5.3
 1.5
 4.3

-0.2
23 eif4a3 eukaryotic translation initiation factor 4A3 394053 7.6 4.0
 0.2
-0.2
 0.1
-0.0
 2.6
0.2
 0.5
 3.2
0.3
 0.3
-0.7
 5.1
1.6
 1.1
-0.7
 3.7
-0.9
 4.1
3.5
 2.3
0.2
 5.0
0.5
 4.0
0.8
 -1.3
-1.6
 3.0
1.7
 3.3
1.6
 0.2
-0.8
 0.8
0.7
24 caprin1a cell cycle associated protein 1a 445090 7.6 3.9
 3.7
1.5
 3.2
-0.1
 3.8
-0.6
 2.7
-1.0
 3.6
0.7
 1.8
0.3
 2.3
-1.5
 3.1
1.6
 3.7
0.7
 4.5
-2.0
 1.7
1.2
 1.6
1.3
 2.2
 2.5




25 supt6h SPT6 homolog, histone chaperone and transcription elongation factor 337866 7.5 3.9
 4.0
 1.4
 7.5
 2.2
 6.2
 1.6
 5.7
 1.7
 5.1
 5.4
 -0.0
 5.8
 5.2
 1.9
 0.4
 5.4
 2.4
 4.3
26 cdk11b cyclin-dependent kinase 11B 494103 7.5 3.9
 2.7
 0.5
0.1
 3.6
2.7
 -0.1
 2.4
 -0.4
 1.1
 0.0
 1.5
 4.0
 -0.8
 5.3
 1.6
 1.2
 -0.2
-0.4
 2.2
2.2

0.7
27 hnrnpul1l heterogeneous nuclear ribonucleoprotein U-like 1 like 100330645 7.4 3.8
 3.9
2.0
 1.0
-0.8
 6.0
5.5
 1.1
0.1
 3.9
3.5
 1.8
0.2
 4.2
3.5
 0.2
-1.0
 4.8
4.1
 4.5
4.2
 0.9
-0.3
 4.9
3.9
 6.4
 2.0
 2.6
 4.9


28 tardbpa TAR DNA binding protein a 386630 7.3 3.8
 -0.4
-1.0
 0.6
 4.0
 0.3
 0.7
 0.3
 -0.1
 -1.7
 0.5
 3.1
 1.0
 2.7
 0.5
0.3
 -0.2
-1.0
 0.5
 0.8

-0.4
29 u2af2b U2 small nuclear RNA auxiliary factor 2b 402989 7.2 3.8
 0.9
-0.4
 0.5
 4.3
 -0.7
 3.4
 -0.6
 4.1

4.0
 1.0
 4.4
 1.5
 -1.1
 1.0
 4.6


30 crnkl1 crooked neck pre-mRNA splicing factor 1 393920 7.1 3.7
 0.9
 -0.2
 2.1
 1.0
 3.0
 2.7
 3.7
 3.7
 1.2
 4.5
 1.2
 1.8
 4.4
 1.6
 -0.1
 5.0
 -0.4
 2.0
 0.3
31 ddx46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 321948 7.0 3.7
 3.3
 2.9
 4.1
 2.0
 3.7

1.5
 1.4
 1.7
 3.0
 1.4
 4.5
 1.7

1.8
 1.4
 2.3
32 dhx9 DEAH (Asp-Glu-Ala-His) box helicase 9 568043 7.0 3.7
 2.7
 1.8
 6.7
 1.6
 3.4
 1.6
 3.2

6.8
 2.1
 4.7
 2.5
0.4
 2.2
0.9
 1.4
 6.3


33 prpf3 PRP3 pre-mRNA processing factor 3 homolog (yeast) 403072 7.0 3.7
 0.1
 1.0
 3.9
 -0.9
 3.4
 -0.4
 2.6
 -0.2
 1.9
 3.3
 1.5
 3.5
 2.4
 -0.5
 -0.3
 2.9
 -0.8
 0.9
34 trip12 thyroid hormone receptor interactor 12 564866 6.9 3.6
 5.5
 6.5
 4.0
 7.4
 4.9
 4.5
 5.4
 4.2
 0.7
 5.0
 2.5
 1.6
 3.0
 4.8

3.7
 4.1
 -0.2
35 smg1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase 569810 6.8 3.6
 2.4
 1.3
 2.9
 4.7
 1.7
 5.8
 0.9
 3.2
 2.7
 1.5
 2.2
 1.9
 4.5
 3.9
 0.8
 3.8


36 nup98 nucleoporin 98 and 96 precursor 777756 6.6 3.5
 2.0
 1.5
 4.6
 3.2
 4.3
 1.9
 4.9
 0.7
 7.2
 9.2
 0.6
 5.0
 7.2
 7.4
 1.9
 7.8
 3.3
 4.1
37 znf318 zinc finger protein 318 100330539 6.5 3.4
 1.7
 0.4
 2.9
 1.4
 1.6
 2.5
 2.7
 1.8
 0.9
 2.7

3.5
 0.2




38 smg5 SMG5 nonsense mediated mRNA decay factor 553261 6.5 3.4
 3.8
 0.3
 2.9
 0.4
 0.1
 0.2
0.1
 1.1
-0.6
 -0.6
 2.6
 2.2
 0.3
 2.6
 2.0
 0.2




39 smarca4a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a 353295 6.5 3.4
 3.7
1.4
 1.4
-0.5
 5.6
1.0
 1.6
0.1
 5.0
0.4
 1.4
0.5
 7.5
3.0
 1.4
1.0
 5.1
1.2
 2.7
0.5
 -0.2
-1.3
 2.6
2.0
 7.3
 3.1
 0.2
-0.6
 3.3
2.3
 3.7
2.2
 3.4
3.1
40 si:dkeyp-121d4.3 si:dkeyp-121d4.3 100004621 6.4 3.4


















41 pelp1 proline, glutamate and leucine rich protein 1 100003680 6.4 3.4
 2.8
 1.2
 3.5
 0.9
 3.4
 -1.7
 1.5

3.6
 -0.3
 3.5
 1.6
 -0.3




42 xab2 XPA binding protein 2 387600 6.4 3.3
 -1.2
 -0.8
 5.3
 -0.5
 5.8
 -0.0
 4.3
 -0.1
 4.6
 3.6
 -1.8
 4.1
 6.0
 2.6
 0.9
 5.0
 2.3
 2.8
 -1.2
43 virma vir like m6A methyltransferase associated 560260 6.4 3.3
 2.1
 3.4
 3.4
 2.3
 8.1
 2.9
 8.1
 4.9
 4.7
 7.5
 0.7
 2.5
 5.6
 4.6




44 ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component 100036549 6.3 3.3
 2.6
 2.5
 4.6
 1.8
 2.7
 2.5
 3.2
 1.6
 3.4
 3.2
 1.1
 3.0
 3.1
-0.1
 1.4
-1.2
 -0.2
 3.1
 2.7
 1.7
 -0.1
45 smc1al structural maintenance of chromosomes 1A, like 403060 6.3 3.3
 0.4
0.4
 1.3
0.2
 7.4
0.5
 2.9
0.7
 4.0
0.1
 0.2
0.1
 5.5
0.4
 -0.6
-1.4
 3.7
-1.3
 3.7
 1.5
 4.5
 3.5
 0.7
 1.3
 3.9
 2.7
 2.4
46 ik IK cytokine 322241 6.3 3.3
 1.2
 -0.6
 3.6
 1.6
 4.7
 -0.2
 4.0
 -0.6
 3.8
 3.7
 -0.3
 2.0
 -0.1
 -0.3
 -0.3
 2.0


47 supt16h SPT16 homolog, facilitates chromatin remodeling subunit 562348 6.3 3.3
 3.9
 1.7
 6.5
 3.0
 2.9
 -0.1
 5.0
 -0.7
 7.2
 4.7
 0.7
 5.5
 6.8
 3.9
 -0.3
 5.0
 1.9
 2.0
 -1.0
48 nup210 nucleoporin 210 570945 6.2 3.3
 5.1

0.1
-0.2
 3.2
-0.2
 -0.1
 2.4
 2.9
 -0.1
 2.7
 -1.2
 1.2
 5.8
 2.3
 2.1
 5.9


49 cpsf1 cleavage and polyadenylation specific factor 1 432372 6.2 3.3
 2.1
 0.4
 5.3
 -0.1
 8.7
 -0.5
 6.0
 1.5
0.4
 4.3
3.9
 2.9
 -0.9
 4.6
 5.9
 4.4
 1.9
 1.6
 3.3
 4.0
 4.6
50 prrc2c proline-rich coiled-coil 2C 407633 6.2 3.3
 5.0
 3.0
 5.0
 3.6
 2.8
 1.1
 1.1

3.3
 2.2
 3.4






The preparation time of this page was 1.0 [sec].