Orthologous genes in OrthoFinder**

Species Gene Description
 dre-u.3  ptbp3  polypyrimidine tract binding protein 3 
 dre-r.3  ptbp3  polypyrimidine tract binding protein 3 
 dre-m.5  ptbp3  polypyrimidine tract binding protein 3 
 dre-u.3  ptbp2a  polypyrimidine tract binding protein 2a 
 dre-u.3  ptbp1a  polypyrimidine tract binding protein 1a 
 dre-u.3  ptbp2b  polypyrimidine tract binding protein 2b 
 hsa-u.4  PTBP3  polypyrimidine tract binding protein 3 
 hsa-u.4  PTBP2  polypyrimidine tract binding protein 2 
 hsa-u.4  PTBP1  polypyrimidine tract binding protein 1 
 mmu-u.4  Ptbp1  polypyrimidine tract binding protein 1 
 mmu-u.4  Ptbp2  polypyrimidine tract binding protein 2 
 mmu-u.4  Ptbp3  polypyrimidine tract binding protein 3 
 rno-u.3  Ptbp3  polypyrimidine tract binding protein 3 
 rno-u.3  Ptbp2  polypyrimidine tract binding protein 2 
 rno-u.3  Ptbp1  polypyrimidine tract binding protein 1 
 gga-u.3  PTBP2  polypyrimidine tract binding protein 2 
 gga-u.3  PTBP1  polypyrimidine tract binding protein 1 
 mcc-u.3  PTBP1  polypyrimidine tract binding protein 1 
 mcc-u.3  PTBP3  polypyrimidine tract binding protein 3 
 mcc-u.3  PTBP2  polypyrimidine tract binding protein 2 
 cfa-u.3  PTBP1  polypyrimidine tract binding protein 1 
 cfa-u.3  PTBP3  polypyrimidine tract binding protein 3 
 cfa-u.3  PTBP2  polypyrimidine tract binding protein 2 
 dme-u.3  heph  hephaestus 
 cel-u.3  ptb-1  uncharacterized protein 

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Top 50 coexpressed genes to ptbp3 (dre-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 dre565   Ether lipid metabolism  1 56 -
 dre3018   RNA degradation  1 86 -
 dre4142   Lysosome  1 184 -
 dre4141   Protein processing in endoplasmic reticulum  1 202 -
 dre4144   Endocytosis  1 341 -

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dre:ptbp3 (polypyrimidine tract binding protein 3) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID
Other ID LINK Target Reference

dre-u.3
for
ptbp3


dre-r.3
for
ptbp3


dre-m.5
for
ptbp3


dre-u.3
for
ptbp2a


dre-u.3
for
ptbp1a


dre-u.3
for
ptbp2b


hsa-u.4
for
PTBP3


hsa-u.4
for
PTBP2


hsa-u.4
for
PTBP1


mmu-u.4
for
Ptbp1


mmu-u.4
for
Ptbp2


mmu-u.4
for
Ptbp3


rno-u.3
for
Ptbp3


rno-u.3
for
Ptbp2


rno-u.3
for
Ptbp1


gga-u.3
for
PTBP2


gga-u.3
for
PTBP1


mcc-u.3
for
PTBP1


mcc-u.3
for
PTBP3


mcc-u.3
for
PTBP2


cfa-u.3
for
PTBP1


cfa-u.3
for
PTBP3


cfa-u.3
for
PTBP2


dme-u.3
for
heph


cel-u.3
for
ptb-1

1 kctd5a potassium channel tetramerization domain containing 5a 322008 8.4 4.4

4.4
0.6
2.7
0.7
1.2
0.6
0.1
-0.8
0.0
-0.5
2.1
-0.1
2.9
-0.2
1.0
0.6
0.1
-1.5
1.5
-0.2
0.6
0.4
1.5
-0.1
3.1
-0.5
2.4
0.4
1.9
-0.5
-0.1
-0.7
0.4
0.2
3.1
-0.1
0.2
-0.7
0.2
-0.6
0.1
2.3
2 spred2b sprouty related EVH1 domain containing 2b 793290 8.2 4.3

0.3
0.1
2.6
0.5
1.7
0.5
0.6
0.5
0.2
-0.9
2.1
-0.7
1.7
0.1
0.2
0.1
0.5
0.3
2.5
1.5
0.3
-0.6
1.7
-0.8
1.6
0.7
2.7
-0.6
1.7
0.6
0.6
0.5
-0.8
-0.8
2.8
0.7
1.3
0.7
-0.3
-1.1
2.1

3 bbx BBX, HMG-box containing 100005540 7.5 3.9

0.6
-0.4
-0.1
0.3
-0.4
0.4
-0.3
-1.8
1.9
0.1
-0.6
-0.8
0.8
0.7
-1.0
1.9
1.2
-2.5
-0.2
0.3


4 rnf44 ring finger protein 44 767686 7.1 3.7

3.7
0.8
-1.5
-2.0
1.0
0.4
5.8
1.9
3.3
-0.1
1.8
1.6
1.7
1.6
3.7
1.7
4.4
0.8
3.4
-0.8
2.5
0.6
1.6
0.9
0.5
-0.7
1.2
0.6
1.3
0.3
4.0
0.8
4.3
2.0
1.8
0.6
3.6
-0.3
0.3
0.1
3.1

5 ankrd11 ankyrin repeat domain 11 327352 6.8 3.5

3.0
-1.4
-1.6
-0.8
-0.6
1.7
-0.1
1.1
-0.2
0.7
0.4
-0.3
0.4
1.0
0.7
0.3
-0.4
0.7
-0.2
0.8


6 lcor ligand dependent nuclear receptor corepressor 558560 6.2 3.2

1.0
-1.9
0.3

















1.1
4.3
7 igf2bp2b insulin-like growth factor 2 mRNA binding protein 2b 557028 6.1 3.2

2.1
0.1
1.8
1.4
0.7
-0.2
-0.1
-0.3
0.7
0.2
0.9
0.6
1.6
0.9
1.0
0.2
1.3
0.6
1.4
1.1
0.6
0.3
0.4
0.3
1.1
0.9
3.2
2.2
1.0
0.3
1.9
0.5
1.1
1.0
1.3
0.4
0.7
0.3
-0.0
-0.4
4.8
2.3
8 phip pleckstrin homology domain interacting protein 569727 6.1 3.2

2.1
0.6
1.0
0.0
3.9
0.9
3.3
1.1
3.8
0.3
0.9
0.1
0.3
0.3
2.7
0.7
4.2
3.1
4.8
1.4
1.9
1.4
0.7
-0.9
3.0
1.8
1.2
0.9
-0.1
-0.2
4.4
3.1
4.0
3.4
0.9
0.6
2.8
2.0
2.4
1.3
1.8

9 klf7a Kruppel-like factor 7a 553670 6.0 3.2

0.8
0.1
0.7
-0.7
-0.4
-0.4
2.1
0.2
0.2
0.7
-0.4
0.9
0.6
2.6
0.9
2.4
1.9
0.4
-0.1
0.8
0.2
1.4
0.5
1.3
0.3
-0.4
-1.2
2.1
0.8
1.4
0.2
-0.3
-0.4
-0.1
-0.2
0.9
0.1
1.7
1.5
10 tmx4 thioredoxin-related transmembrane protein 4 792311 5.9 3.1

1.4
-0.4
0.1
0.0
0.8
0.1
1.9
1.1
1.9
0.2
0.2
3.1
1.0
0.5
0.8
2.2
1.0
-0.4
2.9
0.9
1.8
3.4
0.6
1.8
-0.2
11 fam168a family with sequence similarity 168 member A 751761 5.8 4.1
1.2
1.5
-0.1
0.5
0.3
0.8
-1.0
-0.5
-0.3
-1.1
1.0
-0.1
-1.4


1.7
-1.6
0.5
1.0
0.8
-0.3


12 nos1apa nitric oxide synthase 1 (neuronal) adaptor protein a 553539 5.8 3.0

0.5
0.1
1.3
0.8
-0.4
-0.5
-0.3
-0.6
1.1
-0.3
0.8
-0.8
1.8
-0.3
-0.4
-0.5
-0.3
-0.4
0.3
-0.7
-0.4
-0.4
0.5
-1.4
-0.7
-1.4
0.5
-0.7



0.3
-0.1
-1.3
1.4
3.4
13 hipk3b homeodomain interacting protein kinase 3b 569156 5.6 2.0
3.2
-1.5
-0.6
-0.5
5.2
0.7
0.1
0.3
0.6
4.1
6.8
-0.2
0.5
1.2
1.6
-0.2
4.0
0.9
-0.1
4.4
0.9


14 wdfy1 WD repeat and FYVE domain containing 1 474326 5.5 3.8
1.3
1.1
0.7
-0.2
-0.3
-0.5
-0.8
3.1
0.9
1.3
0.7
0.7
0.3
0.0
-1.4
0.9
-0.5
0.6
0.3
0.4
-0.6
0.1
-0.7
0.9
-1.1
0.8
-0.6
0.7
-0.6
0.6
-0.6
2.1
-0.3
1.0
0.4
-0.3
-0.6
-0.8
-0.9
-0.6
15 kif5bb kinesin family member 5B, b 334108 5.5 2.9

1.2
0.2
1.6
-0.1
1.6
0.4
1.6
-0.6
0.6
0.1
0.8
-0.3
0.9
-0.1
0.9
0.7
3.4
-0.8
2.5
0.1
0.7
0.2
1.1
-0.7
1.8
1.1
-0.2
-1.6
0.3
-0.2
0.7
0.3
0.9
0.8
-0.6
-1.0
2.9
-0.5
2.9
1.8
0.8
1.0
16 col4a1 collagen, type IV, alpha 1 554269 5.4 2.8

1.3
0.3
2.9
0.4
-0.0
-0.7
0.6
0.2
0.1
-0.2
-0.1
-0.2
1.0
0.4
0.6
-0.1
0.3
0.1
1.7
0.9
-0.1
-0.4
1.2
0.9
0.7
0.2
1.9
0.9
1.3
0.8
0.3
-0.4
0.7
0.7
0.5
0.1
0.7
0.2
0.6
-0.0
0.0
-0.5
2.2
1.4
17 btg1 B-cell translocation gene 1, anti-proliferative 114432 5.4 3.1
1.8
1.6
0.7
1.5
0.0
0.2
-0.4
1.1
0.2
0.5
-1.4
1.5
0.6
1.4
0.8
0.9
-0.3
3.4
1.5
2.0
0.7
1.3
0.1
1.9
1.3
1.2
1.0
1.9
1.6
2.0
0.7
3.1
0.2
0.3
-0.5
1.2
-0.4
3.6
0.6
0.2
-0.3

-0.9
18 apbb1 amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) 565164 5.3 2.8

-0.6
-1.4
-0.1
-0.5
-0.3
-0.6
-1.8
1.3
-1.0
-0.7
-1.3
1.5
-1.0
-0.3
-1.3
-1.6
1.8
-1.1
1.9
0.7
-0.9
-2.6
1.1
-0.9
-0.5
-1.1
1.7
1.3
0.6
-0.7
-0.2
-2.3
0.9
0.7

3.3
19 tmem30aa transmembrane protein 30Aa 337397 5.3 2.8
2.1
2.5
-0.2
1.3
1.0
1.3
-0.1
2.9
1.3
-0.2
-1.2
1.3
-0.4
-0.2
-1.8
1.2
-0.2
2.8
1.4
1.8
1.2
0.5
0.3
0.8
-1.0
0.1
-0.3
0.2
-0.5
1.7
1.0
3.0
-0.5
0.5
-0.6
0.6
-0.9
3.7
-0.4
0.8
-0.8
-1.7
0.8
-0.1
20 znf362b zinc finger protein 362b 100038768 5.3 2.8

2.0
1.5
0.5
0.4
3.8
0.8
0.1
2.6
0.9
1.7
1.1
0.2
0.1
1.8
1.6
0.6
-0.6
1.7
-1.7
0.5
3.2
-0.3
-0.1


21 purab purine-rich element binding protein Ab 557266 5.2 2.8

1.4
0.9
0.6
0.1
0.5
0.3
2.1
-0.2
0.7
-1.1
0.3
0.2
1.3
-0.6
0.1
-0.3
3.5
-0.2
3.4
1.2
0.8
-0.3
0.1
-1.2
0.3
0.0
-0.3
-2.0
1.1
2.4
0.8
1.2
-1.1
1.3
0.5
1.0
0.4
0.1
-1.3
22 ece2b endothelin converting enzyme 2b 793465 5.2 2.7

-1.3
-1.6
1.8
-0.1
-1.0
-1.3
1.1
-0.8
1.3
1.0
-1.3
0.8
0.8
-1.0
-0.3
-0.5
2.6
0.6
-0.3
-0.5
3.2
-1.4
1.9
0.1
0.1
-1.5
-0.5
-0.7
2.1
-0.0
-1.2
-0.1
-0.1
3.0
23 neurl1aa neuralized E3 ubiquitin protein ligase 1Aa 561943 5.1 2.7

0.1
0.0
-0.6
-0.7
0.5
0.1
0.7
-0.7
-0.3
-0.5
0.1
-0.6
-0.3
-1.4
0.5
-0.7
0.5
0.3
0.4
-0.4
0.1
-1.4
-0.2
-1.8
0.9
-1.4
0.5
0.2
0.4
-0.2
0.2
0.1
0.3
-0.7
-1.2
-1.8
-0.6
-0.8
0.7
-0.9
1.9

24 peds1 plasmanylethanolamine desaturase 1 450031 5.1 2.7

0.2
-1.1
0.8
-1.3
-0.7
-1.5
0.6
-1.4
0.2
-0.1
-1.1
0.2
1.1
-0.6
-0.3
0.7
-0.4
0.2
0.7
-0.1
0.7
-0.1
-0.2
-0.5
-0.1
25 bcam basal cell adhesion molecule (Lutheran blood group) 767689 5.0 2.6

-1.7
-0.3
-1.6
-0.0
-0.4
0.3
0.6
-0.4
-0.1
1.5
-0.5
0.8


0.4
-0.3
0.1
-0.2
0.1
-0.0


26 mical1 microtubule associated monooxygenase, calponin and LIM domain containing 1 568573 5.0 2.6

-0.3
-0.9
-2.3
1.3
0.6
-0.5
-0.1
1.1
-0.0
-0.7
0.4
-0.3
-0.8
1.2
0.5
-0.4
-1.6
1.1
0.5
1.4


27 crebrf creb3 regulatory factor 100149876 4.9 2.6

0.7
0.3
-0.7
-0.3
1.0
0.4
-1.2
1.6
2.5
1.4
-0.3
-1.9
1.8
-0.8
-0.3
3.3
1.6
-1.6
1.6
2.1
2.3

28 grb10b growth factor receptor-bound protein 10b 562032 4.9 2.6

0.2
-0.3
0.5
-0.3
-0.2
-0.7
0.4
1.1
-0.4
0.3
0.5
-0.1
1.1
0.5
0.8
2.3
-1.6
-0.6
-0.3
0.1
0.2
-1.1
-0.8


29 LOC100333618 RNA-binding motif, single-stranded-interacting protein 1-like 100333618 4.9 2.6

2.0
1.2
0.2
0.2
2.8
2.4
3.4
-0.0
0.9
0.3
0.5
0.1
1.6
1.1
0.5
-2.5
3.7
0.6
2.9
2.1
0.6
0.4
0.9
0.3
1.5
1.0
2.4
2.2
0.8
0.7
2.4
-1.3
0.8
0.2
1.9
-0.2
0.9
0.3
1.3
0.7
4.9
1.5
30 puraa purine-rich element binding protein Aa 415106 4.8 2.6

1.4
0.9
0.6
0.1
0.5
0.3
2.1
-0.2
0.7
-1.1
0.3
0.2
1.3
-0.6
0.1
-0.3
3.5
-0.2
3.4
1.2
0.8
-0.3
0.1
-1.2
0.3
0.0
-0.3
-2.0
1.1
2.4
0.8
1.2
-1.1
1.3
0.5
1.0
0.4
0.1
-1.3
31 fam169aa family with sequence similarity 169 member Aa 751650 4.8 2.5

0.3
-1.7
-0.4
1.1
0.9
0.3
-0.9
2.8
0.5
0.7
1.1
-0.0
0.0
0.5
-0.4
0.5
3.0
0.4
0.1
0.4


32 tns1b tensin 1b 555362 4.8 2.6
1.9
0.1
0.1
-1.6
-1.3
0.1
0.1
0.4
-1.1
-0.2
0.5
-0.6
0.1
0.5
0.8
0.1
-1.0
-0.2
1.4
0.0
-0.6


33 slc15a4 solute carrier family 15 member 4 393932 4.8 2.3
2.1
-0.4
-0.1
-1.3
1.7
0.3
0.7
0.4
0.3
0.2
0.8
-0.6
0.3
-1.3
0.5
0.5
0.4
-0.8
-1.1
-1.8
0.6
0.2
2.0
-0.3
0.7
0.3
0.1
-0.3
0.4
-0.4
-0.0
0.3
0.7


34 kdm6bb lysine (K)-specific demethylase 6B, b 563644 4.8 2.5

3.0
1.3
2.3
0.5
2.0
1.3
1.1
0.5
3.2
0.5
2.2
1.2
1.9
1.0
1.8
0.4
3.6
0.8
3.0
1.4
1.4
0.5
1.6
0.6
4.6
1.1
0.2
-0.2
2.3
1.7
1.2
0.1
2.7
-0.1
1.7
0.6
2.1
1.9
2.4
0.0
0.9
2.8
0.3
35 vdrb vitamin D receptor b 564511 4.8 2.5

0.4
0.1
0.2
0.1
-0.7
-1.3
-0.2
-1.5
1.0
0.1
-0.9
-0.4
0.5
-1.7
0.2
-1.2
0.6
0.6
0.8
-2.5
2.0
0.1
-1.6


36 tmem178b transmembrane protein 178B 436669 4.8 2.5

0.2
-1.7
-0.3
-1.7
1.9
-0.7






0.2
0.4
-1.0
0.0
-0.9
-0.8
1.1
0.5
-1.4
0.0
-0.1


37 ap3d1 adaptor related protein complex 3 subunit delta 1 563359 4.7 2.5

-0.4
-0.1
-0.7
-0.8
-2.9
4.3
0.6
-0.8
-0.4
1.3
-0.8
0.0
-0.1
1.6
3.9
0.8
-1.2
3.8
-0.7
-1.6
2.9
1.8
38 LOC100537840 E3 ubiquitin-protein ligase rnf213-alpha-like 100537840 4.7 2.5























39 celf5a cugbp, Elav-like family member 5a 568052 4.7 2.5

1.8
0.7
0.0
-0.8
3.1
1.7
-0.6
-0.6
1.9
0.6
-0.5
-0.6
1.1
0.3
1.9
1.8
0.4
0.4
1.2
0.0
0.8
0.2
1.8
0.4
-0.3
-0.6
-0.0
-1.1
-0.0
-0.9
0.2
-0.3
1.1
-0.2
0.7
-0.2
0.7
0.2
1.4
40 cir1 corepressor interacting with RBPJ, CIR1 553421 4.7 2.5

1.4
-1.0
-0.3
-0.2
0.3
-0.8
-1.5
1.5
1.0
-0.1
1.3
-1.3
-0.3
-0.6
-1.6
0.3
2.0
-2.1
0.7
1.2
0.9
-1.1
41 zbtb20 zinc finger and BTB domain containing 20 568779 4.6 2.4

0.4
-1.8
-0.0
0.0
2.0
-0.5
0.2
0.2
-0.9
1.6
0.1
-0.8
0.5
-1.1








42 ptprsa protein tyrosine phosphatase receptor type Sa 140820 4.6 2.7
1.5
2.7
0.5
2.3
0.2
1.8
1.3
0.7
-0.4
1.2
0.9
1.0
0.7
0.7
0.3
1.7
0.1
-0.0
-0.1
0.9
-0.7
1.5
-0.2
1.6
0.6
1.8
1.6
1.3
0.6
2.5
-0.2
-0.4
-0.5
2.3
0.7
0.6
-0.7
1.0
0.4
1.4
0.5

2.4
43 onecut2 one cut homeobox 2 100000073 4.6 2.4

0.3
0.1
1.5
0.7
-0.2
-0.4
0.5
-0.4
0.4
-0.5
0.1
-0.4
0.1
0.1
0.3
0.5
-0.2
0.1
-0.8
0.4
0.3
0.4
0.3
0.0
-0.9
-0.4
0.7
-0.7
0.1
-0.9
1.1
-0.3
0.2
-1.0
0.4
2.2
1.0
44 nhsa Nance-Horan syndrome a (congenital cataracts and dental anomalies) 100150332 4.6 2.4

3.0
0.9
-0.0
-2.2
0.2
-0.6
1.3
-0.4
-0.1
-0.2
-0.0
-0.4
0.4
0.1
0.0
-0.0
-0.0
-0.3
0.8
0.8
-0.8
1.1
0.5


45 dicer1 dicer 1, ribonuclease type III 324724 4.6 2.0
2.3
1.5
1.8
1.7
3.6
2.4
0.3
0.9
2.0
0.1
2.6
-0.5
2.2
1.2
1.0
0.9
1.6
1.2
-0.3
1.3
0.8
-1.2
-1.3
-1.1
46 ralbp1 ralA binding protein 1 404612 4.6 2.4

-0.0
-0.2
-1.1
3.1
-2.6
-0.5
-0.9
-2.7
1.9
1.4
0.4
1.2
-2.0
0.7
-0.1
-1.2
2.3
-0.4
2.4
-1.4
-0.2
2.1
-1.0
0.1
0.8
47 csrnp2 cysteine-serine-rich nuclear protein 2 100003989 4.6 2.4

-0.2
-0.6
0.2
-0.4
0.4
0.1
-0.1
-0.4
1.3
0.2
1.7
-0.3
2.0
-0.3
1.9
0.8
0.6
-0.5
0.4
-0.2
2.4
-0.1
2.5
-0.0
1.3
1.2
2.2
0.3
0.4
-1.2
1.7
0.6
0.7
0.3
2.2
1.5
1.0
0.3
1.0
-0.4
2.3
0.6
48 dnajc5aa DnaJ (Hsp40) homolog, subfamily C, member 5aa 386768 4.6 2.4

1.8
1.4
1.2
1.0
1.2
0.1
0.9
-0.7
-0.8
0.6
0.4
1.5
0.9
0.0
0.5
0.2
-0.8
-1.0
-0.2
-2.0
2.1
-0.7
1.2
1.0
-0.4
2.3
-0.4
0.0
2.6
-0.6
49 appa amyloid beta (A4) precursor protein a 58083 4.5 1.7
2.6
1.7
0.6
-0.2
-0.6
1.6
0.2
0.7
-1.0
0.6
-1.2
1.5
0.4
-0.4
-0.6
-0.2
-0.7
-0.1
-0.1
2.0
0.4
0.2
-0.2
0.4
0.0
-0.2
-0.4
1.2
0.2
0.4
-0.3
0.1
0.4
0.0
1.0
-0.5
1.4
-1.3
1.1
0.6
0.8
4.5
50 qkia QKI, KH domain containing, RNA binding a 30471 4.5 2.4

1.6
-0.6
1.0
-0.5
1.4
0.1
0.9
0.7
0.6
-0.3
1.3
1.6
0.4
3.2
0.7
3.4
1.6
1.2
1.9
3.7
-0.5
0.5
1.7
2.2
4.7
0.8
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