Orthologous genes in OrthoFinder**

Species Gene Description
 dre-u.3   pabpc1b   poly A binding protein, cytoplasmic 1 b 
 dre-r.3   pabpc1b   poly A binding protein, cytoplasmic 1 b 
 dre-m.5   pabpc1b   poly A binding protein, cytoplasmic 1 b 
 dre-u.3   pabpc1a   poly(A) binding protein, cytoplasmic 1a 
 dre-u.3   pabpc1l   poly(A) binding protein, cytoplasmic 1-like 
 dre-u.3   pabpc4   poly(A) binding protein, cytoplasmic 4 (inducible form) 
 hsa-u.4   PABPC4L   poly(A) binding protein cytoplasmic 4 like 
 hsa-u.4   PABPC1L   poly(A) binding protein cytoplasmic 1 like 
 mmu-u.4   Pabpc1   poly(A) binding protein, cytoplasmic 1 
 mmu-u.4   Pabpc6   poly(A) binding protein, cytoplasmic 6 
 rno-u.3   Pabpc6   poly(A) binding protein, cytoplasmic 6 
 rno-u.3   Pabpc2   poly(A) binding protein, cytoplasmic 2 
 gga-u.3   PABPC1L   poly(A) binding protein cytoplasmic 1 like 
 gga-u.3   PABPC4   poly(A) binding protein cytoplasmic 4 
 gga-u.3   PABPC1   poly(A) binding protein cytoplasmic 1 
 mcc-u.3   PABPC1   poly(A) binding protein cytoplasmic 1 
 mcc-u.3   PABPC4L   poly(A) binding protein cytoplasmic 4 like 
 cfa-u.3   PABPC4   poly(A) binding protein cytoplasmic 4 
 dme-u.3   pAbp   poly(A) binding protein 
 cel-u.3   pab-2   Polyadenylate-binding protein 
 cel-u.3   pab-1   Polyadenylate-binding protein 
 sce-u.3   PAB1   polyadenylate-binding protein 
 spo-u.3   klp2   kinesin-like protein Klp2 
 spo-u.3   pkl1   kinesin-like protein Pkl1 

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Top 50 coexpressed genes to pabpc1b (dre-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 dre3015   mRNA surveillance pathway  4 93 4.10
 dre4218   Cellular senescence  4 191 2.91
 dre4510   Focal adhesion  4 267 2.38
 dre4910   Insulin signaling pathway  3 172 2.06
 dre4217   Necroptosis  3 173 2.05

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dre:pabpc1b (poly A binding protein, cytoplasmic 1 b) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

dre-u.3
for
pabpc1b
dre-r.3
for
pabpc1b
dre-m.5
for
pabpc1b
dre-u.3
for
pabpc1a
dre-u.3
for
pabpc1l
dre-u.3
for
pabpc4
hsa-u.4
for
PABPC4L
hsa-u.4
for
PABPC1L
mmu-u.4
for
Pabpc1
mmu-u.4
for
Pabpc6
rno-u.3
for
Pabpc6
rno-u.3
for
Pabpc2
gga-u.3
for
PABPC1L
gga-u.3
for
PABPC4
gga-u.3
for
PABPC1
mcc-u.3
for
PABPC1
mcc-u.3
for
PABPC4L
cfa-u.3
for
PABPC4
dme-u.3
for
pAbp
cel-u.3
for
pab-2
cel-u.3
for
pab-1
sce-u.3
for
PAB1
spo-u.3
for
klp2
spo-u.3
for
pkl1
1 stau2 staufen double-stranded RNA binding protein 2 393899 9.1 4.7
 3.6
 4.8
1.0
 1.2
0.2
 2.7
1.6
 -0.2
-0.8
 1.2
-0.3
 0.8
-0.5
 -0.5
-1.2
 0.6
-0.1
 -0.6
-1.2
 0.9
0.2
 1.3
0.3
 3.4
0.2
 6.0
-0.9
 0.5
-0.8
 1.1
-1.1
 3.5
 6.3
 2.9
0.2
 -0.9
2 pabpc1a poly(A) binding protein, cytoplasmic 1a 606498 5.7 2.8
 2.5
 5.7
1.1
 0.4
0.3
 3.6
1.1
 -0.4
-1.1
 1.0
0.5
 7.5
1.5
 8.7
0.9
 6.9
0.1
 6.9
-0.1
 2.0
0.2
 2.0
1.4
 1.4
0.2
 7.1
-0.1
 -0.1
-0.7
 4.2
4.1
 4.1
1.3
 1.3
3 pabpn1 poly(A) binding protein, nuclear 1 406543 5.3 2.8
6.1
-0.5
 4.1
1.0
 0.7
0.2

1.3
 0.3
 1.0
 -0.6
 1.3
 2.2
 -0.6
 0.1
 0.2
 1.3
 5.4
 0.9
0.4
 0.5
-0.3
 0.0
 -0.1
 -1.3
4 stau1 staufen double-stranded RNA binding protein 1 334440 5.2 2.9
 1.9
 4.8
1.0
 1.2
0.2
 2.7
1.6
 -0.2
-0.8
 1.2
-0.3
 0.8
-0.5
 -0.5
-1.2
 0.6
-0.1
 -0.6
-1.2
 0.9
0.2
 1.3
0.3
 3.4
0.2
 6.0
-0.9
 0.5
-0.8
 1.1
-1.1
 3.5
 6.3
 2.9
0.2
 -0.9
5 slc7a10a solute carrier family 7 member 10a 567420 5.0 2.6
0.8
0.7
 0.6
0.1
 2.6
1.8
 0.8
0.2
 1.7
1.5
 3.2
0.9
 3.3
1.8
 1.0
0.1
 0.7
0.6
 0.9
0.8
 2.3
1.4
 1.3
1.2
 1.4
0.8
 0.4
-0.1
 1.3
1.3
 1.7
1.1
 1.8
1.2
 1.4
0.4
 0.1
-0.7
 0.3
0.3
 0.2
-0.1
6 ssrp1b structure specific recognition protein 1b 449949 4.7 2.5
1.9
-1.1
 0.2
-0.7
 0.9
0.6
 0.2
 1.0
 1.6
 -0.5
 0.4
 0.8
 -0.5
 1.2
 1.5
 1.4
 -0.9
 3.1
 1.5
 1.9
-1.3
 0.3
0.2
 -0.9
 1.9
 -1.0
7 atxn2 ataxin 2 569210 4.5 2.4
2.2
1.1
 0.7
0.5
 1.1
0.5
 -0.3
-0.9
 3.0
1.8
 3.4
2.3
 0.5
0.1
 1.7
0.2
 1.1
-0.7
 1.1
 1.2
-0.6
 2.5
-0.2
 5.2
2.0
 -1.2
-1.5
 2.5
2.3
 2.8
 4.7
 4.1
 1.6
 0.9
 1.2
8 atp1b3b ATPase Na+/K+ transporting subunit beta 3b 64272 4.4 1.9
 2.1
 0.9
0.9
 0.5
-0.6
 1.7
-2.2
 -1.5
 -1.6
 1.7
 0.2
 -0.6
 0.5
 -0.2
 -0.6
 0.5
 0.7
 0.3
 -0.5





9 prkar2aa protein kinase, cAMP-dependent, regulatory, type II, alpha A 556042 4.4 2.3
 1.8
 2.7
0.8
 0.8
0.0
 1.1
1.0
 0.3
-1.2
 -1.0
-1.9
 1.2
0.2
 -0.6
-1.5
 -0.6
-1.0
 0.6
-0.4
 0.6
-0.3
 2.2
-1.4
 -0.1
-0.5
 1.3
0.4
 1.1
1.0
 2.7
0.7
 1.6

1.9

10 gnb1a guanine nucleotide binding protein (G protein), beta polypeptide 1a 322104 4.3 2.3
 1.7
 4.4
2.4
 1.0
0.9
 1.1
0.2
 1.4
0.8
 2.0
-0.4
 2.0
1.1
 -0.2
-0.6
 0.9
0.3
 0.6
-0.3
 0.6
0.6
 -0.2
-0.5
 1.0
0.6
 1.6
1.4
 0.8
0.8
 0.2
-0.1
 5.3
-1.5
 4.6
0.9
 2.5
-1.0
 0.8

11 cpeb4b cytoplasmic polyadenylation element binding protein 4b 100333151 4.3 2.3
0.7
0.6
 1.5
0.4
 0.6
-0.5
 0.3
 -0.5
 0.1
0.1
 0.2
-0.2
 -0.1
-0.3
 0.5
-0.0
 0.9
-0.8
 1.4
-1.0
 1.1
0.9
 1.8
1.6
 -0.9
-0.9
 0.6
-0.3
 1.2
 0.7
 0.7
0.8
 -1.1
12 LOC101883792 zinc fingers and homeoboxes protein 2-like 101883792 4.2 2.2





















13 map7d1b MAP7 domain containing 1b 796270 4.2 2.2
 1.7
 -0.6
 0.9
 1.9















1.0
0.7
 0.9
0.3
14 LOC108191614 uncharacterized LOC108191614 108191614 4.1 2.2





















15 tpk2 thiamin pyrophosphokinase 2 751683 4.1 2.3
 1.5
 0.2
0.1
 0.4
-0.9
 2.8
-0.6

-0.4
 0.8
 -1.4
 -1.4
 0.1
 -0.0
 -0.4
 0.3
 1.0
 -0.1
 0.2
0.1
 0.1
 -1.3
 0.6
-1.0

16 atp6v1e1a ATPase H+ transporting V1 subunit E1a 108179059 4.0 2.1
0.0
-1.7
 0.1
-0.2
 2.0
-0.2
 -0.9
-1.4
 0.6
-1.3
 -0.8
 -1.2
 -0.2
 -0.5
 -0.1
 -0.1
 0.2
 1.1
 -1.2
 -1.7
 4.7
 0.3
 1.2
 2.2

17 r3hdm1 R3H domain containing 1 110437712 4.0 2.1
0.8
0.6
 0.5
 0.6
0.4
 -0.1
-0.9
 2.1
1.3
 3.0
1.8
 -0.0
-0.7
 -0.2
-0.6
 0.0
-0.1
 3.8
0.7
 2.8
2.4
 2.4
2.3
 5.4
2.3
 -0.5
-1.3
 3.2
2.2
 2.9
 0.2
 -0.3
 0.6

18 appa amyloid beta (A4) precursor protein a 58083 4.0 2.6
 1.2
 2.7
1.6
 0.6
0.4
 0.8
0.6
 -0.5
-0.6
 0.6
0.1
 0.2
-0.3
 -0.5
-0.6
 0.3
0.0
 0.5
0.3
 0.7
-0.5
 -0.5
-1.9
 0.9
0.1
 0.9
-0.1
 -0.3
-1.6
 0.7
-1.3
 1.7
 7.1
 4.0


19 eef2l2 eukaryotic translation elongation factor 2, like 2 336168 4.0 2.1
 1.6
 12.5
1.9
 0.6
0.6
 6.1
1.0
 -0.3
 -1.1
 7.1
 -0.9
 -0.3
 -0.4
 0.0
 1.7
 9.6
 9.8
 -0.5
 5.4
 3.6
 2.2
 13.7
 5.1
4.9

20 puraa purine-rich element binding protein Aa 415106 3.9 2.1
3.3
2.0
 1.7
0.5
 0.5
-0.2
 0.1
-0.3
 -0.3
-1.6
 2.7
1.6
 0.4
-0.9
 -0.2
-1.0
 0.4
-0.9
 0.1
-0.6
 0.7
0.4
 1.8
-0.2
 1.0
 -0.4
 -0.2
-1.0
 1.1
 1.0
 1.4
-0.8
 -0.2
21 lgals2a lectin, galactoside-binding, soluble, 2a 405830 3.9 2.1
0.4
 0.5
0.1
 2.5
0.6
 0.2
 -0.7
 -0.3
 -0.8
 -0.6
 -0.1
 -0.6
 0.2
 -0.3
 0.7
 -0.3
 -1.3





22 mmp23ba matrix metallopeptidase 23ba 101882601 3.8 2.0
1.3
 -0.1
 -0.1

-1.0
 -1.1
 0.5
 -0.1
 -0.6
 -0.3
 -0.2
 -0.1
 1.4
 -0.5





23 ybx1 Y box binding protein 1 795398 3.8 2.3
 1.2
 9.7
 0.4
 2.1
 0.5
-0.3
 0.4
-0.1
 5.9
5.7
 2.0
0.4
 1.0
0.4
 1.5
0.4
 0.7
0.0
 2.0
2.0
 4.3
4.0
 6.8
2.9
 0.6
0.5
 5.3
3.4
 6.9
 3.2
 3.7
-1.4
 0.1
24 ptena phosphatase and tensin homolog A 794088 3.8 1.6
 2.0
 3.8
-0.5
 -0.1
-0.6
 0.9
0.3
 -0.2
 -1.0
 2.0
 -0.3
 -0.2
 0.5
 0.1
-1.1
 -0.8
-0.9
 2.4
-1.1
 0.9
0.4
 -0.2
-0.6
 0.4
 0.8
 -0.0
 -1.7
 -0.2

25 agla amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a 567798 3.8 1.6
 1.9
 -0.4
 0.3
 2.0
 -0.4
 -0.7
 -0.3
 -0.7
 -0.8
 -0.5
 0.1
 1.4
 -0.2
 -1.9
 0.2
 -1.0
 -0.2
 0.4
 0.9
 0.2
 1.3
 1.8
26 zgc:91944 zgc:91944 436941 3.8 2.0
1.5
0.8
 0.3
-0.2
 0.2
-0.5
 0.5
 0.3
 -0.1
 -0.4
 -0.5
 -0.9
 0.3
 0.2
 1.0
 0.2
 0.3
 0.2
0.1
 1.6


27 mbnl2 muscleblind-like splicing regulator 2 560384 3.8 2.0
1.3
0.3
 0.6
-0.3
 0.6
0.5
 1.0
-0.4
 -0.3
-0.5
 1.3
0.6
 0.2
-0.7
 0.7
-1.1
 -0.1
-0.2
 -0.0
-0.2
 2.0
0.6
 3.6
1.8
 2.3
1.4
 0.4
0.2
 0.5
-0.0
 2.8
 2.7
 0.2


28 ak1 adenylate kinase 1 445486 3.8 1.8
 1.7
 0.7
 0.3
 5.2
 -0.9
 -1.4
 -0.4
 0.1
 -0.2
 0.1
 -0.8
 1.5
 -1.0
 -1.4
 0.4
 2.0
 -1.3
 -0.9
 -1.1


29 ampd2a adenosine monophosphate deaminase 2a 100330772 3.8 2.0
3.0
0.5
 0.9
0.4
 3.4
1.4
 -0.2
-0.3
 1.1
0.3
 0.5
0.2
 0.9
0.1
 0.1
-0.0
 -0.3
-0.5
 2.2
1.0
 2.8
0.3
 1.5
-0.3
 0.4
0.0
 0.1
-0.1
 0.8
0.4
 -1.2
 0.9
 1.5
 1.8

30 eef1a1l2 eukaryotic translation elongation factor 1 alpha 1, like 2 664756 3.8 2.0
9.5
2.0
 3.8
1.0
 4.5
0.8
 0.3
-0.2
 0.2
-0.4
 7.1
0.8
 -0.8
-1.1
 0.6
-0.1
 -0.3
-0.7
 -0.4
-0.6
 2.0
1.5
 5.9
-0.7
 -0.3
 -1.8
 1.0
-0.8
 9.2
0.8
 7.8
0.9
 12.6
5.9
 3.5
1.2

31 rilpl1 Rab interacting lysosomal protein-like 1 780843 3.8 2.0
0.1
 0.2
-0.8
 1.2
-0.1
 1.0
 1.6
 -2.1
 -0.5
 0.4
 -0.2
 0.5
 0.3
 0.5
 -0.8
 0.4
 1.7
 -1.1
 -0.1
 -0.8


32 fank1 fibronectin type III and ankyrin repeat domains 1 100005699 3.7 2.0
-0.4
 -0.3
 0.8

-0.3
 1.7
 0.2
 0.8




-1.0





33 phactr1 phosphatase and actin regulator 1 100334776 3.7 2.0
0.7
 0.6
 3.1

-0.3
 -1.1
 1.4
 0.9
 -0.9
 -1.4
 -2.1
 -0.0
 -1.2
 -0.1





34 mapk9 mitogen-activated protein kinase 9 100149273 3.7 2.0
-0.2
-0.3
 0.4
-0.3
 1.0
-0.2
 0.3
0.0
 -0.6
-1.2
 -0.2
-0.3
 2.0
-0.4
 0.2
-0.1
 0.9
-0.5
 -0.2
-0.2
 1.4
-0.1
 -1.4
-1.6
 1.6
-0.4
 0.3
-0.0
 1.2
-0.7
 -1.5
 -0.6
 -1.8


35 col16a1 collagen, type XVI, alpha 1 100535782 3.7 2.0
0.4
 -0.7
 0.8
 1.5
 1.5
 -0.1
 -0.5
 1.1
 -0.1
 4.2
 -0.1
 -0.3
 -1.2
 -0.3
 -0.5





36 si:dkeyp-50d11.2 si:dkeyp-50d11.2 565825 3.7 2.0
1.5
-0.4
 -0.3
-0.4
 0.9
0.5
 -0.4
 -0.6
 -0.2
 -0.9
 -1.1
 -0.0
 0.0
 1.3
 1.4
 -0.4
 -0.8
 0.0





37 pabpc4 poly(A) binding protein, cytoplasmic 4 (inducible form) 321035 3.6 2.0
 1.3
 5.7
1.1
 0.4
0.3
 3.6
1.1
 -0.4
-1.1
 1.0
0.5
 7.5
1.5
 8.7
0.9
 6.9
0.1
 6.9
-0.1
 2.0
0.2
 2.0
1.4
 1.4
0.2
 7.1
-0.1
 -0.1
-0.7
 4.2
4.1
 4.1
1.3
 1.3
38 nfic nuclear factor I/C 100005568 3.6 1.9
0.7
-0.3
 -0.2
-0.9
 1.8
-0.2
 0.6
-0.1
 -0.7
-1.1
 0.5
0.5
 -0.1
-0.9
 0.0
-0.3
 -0.3
-0.4
 0.1
-0.7
 1.0
0.8
 1.4
1.1
 2.9
1.7
 2.7
0.8
 1.6
0.9
 0.1
 0.4
 -0.7


39 tbc1d16 TBC1 domain family, member 16 450056 3.6 1.9
1.5
 1.3
 1.6
 0.9
 -0.2
 0.3
 -1.3
 -0.3
 -0.5
 -0.0
 -1.2
 -0.8
 2.0
 0.6
 -0.3
 -0.8
 0.5
 -0.9


40 scrn2 secernin 2 558306 3.6 1.6
 1.8
 0.3
-0.6
 0.2
0.0
 0.1
-0.3
 -0.2
-0.2
 1.3
0.3
 -0.8
-1.1
 -0.6
-1.1
 0.1
-0.8
 -0.5
-0.9
 0.8
-0.5
 1.2
-1.1
 0.3
-0.4
 -0.9
-1.5
 0.6
-0.1
 -0.0
-0.5
 -0.9




41 ppp1cbl protein phosphatase 1, catalytic subunit, beta isoform, like 334597 3.6 2.1
 1.3
 4.7
4.2
 1.7
0.8
 1.8
0.8
 0.6
0.3
 -0.3
-1.7
 2.3
0.8
 -0.5
-1.3
 -0.4
-0.8
 -0.2
-1.5
 0.0
-0.0
 1.1
0.3
 1.9
0.4
 2.5
2.0
 0.9
0.6
 0.6
0.1
 3.7
2.9
 1.3
1.1
 2.5
1.6
 2.8
2.0

42 fkbp1b FKBP prolyl isomerase 1B 393785 3.6 2.3
 1.1
 1.0
0.0
 -0.4
-0.5
 1.6
-0.4
 -0.5
 0.7
 3.1
-0.6
 -0.3
-0.7
 0.3
 0.6
 -0.0
-0.7
 0.6
-0.7
 -0.1
-1.7
 0.5
0.1
 0.3
0.0
 1.6
 2.1
 -2.2
 0.8
 1.8
 3.5
2.5
 3.6
1.0
43 maptb microtubule-associated protein tau b 567833 3.6 2.2
 1.1
 -0.2
-1.1
 0.2
-0.3
 0.6
0.6
 -0.7
 -1.3
 -1.1
 -0.5
 -1.2
 -0.7
 0.1
 0.9
 0.5
 0.3
 -0.5
 0.3



0.4
 0.8
44 creg2 cellular repressor of E1A-stimulated genes 2 492339 3.6 1.9
0.4
 0.7
 2.0

0.3
 0.3
 -0.4
 -1.0
 1.3
 -0.3
 0.4
 -0.1
 -0.3
 -0.5





45 entpd5b ectonucleoside triphosphate diphosphohydrolase 5b 100334492 3.5 1.9
-0.1
-0.5
 0.1
-1.1
 3.3
0.5
 -0.3
-1.9
 0.8
0.7
 -0.6
-0.7
 0.3
-0.3
 0.4
-0.8
 0.3
-0.6
 -0.2
-0.7
 1.0
-1.3
 -0.2
-3.2
 0.4
-0.9
 -1.0
-1.1
 0.5
0.2
 0.2
 -0.4
 1.1
 4.7
 -0.0
 -1.8
46 col1a1b collagen, type I, alpha 1b 325675 3.5 1.9
2.1
0.9
 0.3
-0.0
 1.5
1.2
 1.6
1.6
 0.9
0.6
 0.4
0.3
 0.4
-0.3
 0.3
-0.2
 -0.4
-0.7
 0.4
0.2
 -0.3
-0.3
 1.4
1.1
 0.4
-0.4
 2.3
1.7
 0.2
0.2



0.6
0.1
 -0.6
-0.6
47 pgk1 phosphoglycerate kinase 1 406696 3.5 1.9
 1.3
 -0.5
 1.2
 2.4
 -0.2
 -1.5
 0.7
-0.3
 8.7
-1.1
 7.0
-1.5
 16.7
-2.2
 0.5
 2.1
 -2.0
 0.8
0.6
 0.9
-1.1
 0.4
 0.1
-0.8
 -0.6
 1.0
 -0.4

48 vdac3 voltage-dependent anion channel 3 406529 3.4 2.2
 1.0
 3.2
1.6
 0.7
0.6
 3.6
3.5
 -0.9
-1.1
 -2.3
-2.5
 0.9
0.8
 0.4
-0.8
 0.2
-0.1
 1.1
0.8
 -0.2
-0.3
 3.1
1.1
 2.9
-1.6
 1.9
1.8
 -1.0
-1.0
 3.0
1.6
 3.2
-1.0
 -0.8
 1.8
 0.2
-0.4

49 dcn decorin 64698 3.4 1.5
 1.7
 0.5
-0.8
 -0.3
-0.5
 1.5
0.7
 1.0
0.4
 0.4
-0.3
 1.2
0.1
 -0.2
-0.6
 0.5
0.3
 -0.3
-0.7
 0.0
-0.7
 -0.1
-0.5
 0.4
-0.6
 1.1
0.4
 3.2
1.3
 0.1
-0.4
 0.1


1.0
0.1
 0.3
-0.5
50 tprg1l tumor protein p63 regulated 1-like 568867 3.4 1.8
-0.0
-1.1
 0.6
0.5
 0.4
-1.5
 -1.2
 -1.8
 0.1
 -0.1
 -0.5
 0.7
 0.3
 0.2
 1.5
 0.5
-0.2
 -1.5
-1.6
 0.1





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