GO:0016363 nuclear matrix
[list]

Species hsa(Human) mmu(Mouse) rno(Rat) gga(Chicken) dre(Zebrafish) dme(Fly) cel(Nematoda) mcc(Monkey) cfa(Dog) sce(Budding yeast) spo(Fission yeast) fca(Domestic cat)
UMAP
Representative coexpressed gene network The number of genes is larger than 100. LCNgo
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mmu03040 Spliceosome 11
mmu04110 Cell cycle 6
mmu05014 Amyotrophic lateral sclerosis 5
mmu05200 Pathways in cancer 4
mmu05202 Transcriptional misregulation in cancer 4
LCNgo
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
rno03040 Spliceosome 8
rno04110 Cell cycle 7
rno05202 Transcriptional misregulation in cancer 4
rno05014 Amyotrophic lateral sclerosis 4
rno05200 Pathways in cancer 3
No network available. LCNgo
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
dre03040 Spliceosome 2
No network available. No network available. No network available. No network available. No network available. No network available. No network available.
Gene list in the network
Symbol Function*
Anp32a acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
Blm Bloom syndrome, RecQ like helicase
Brca2 breast cancer 2, early onset
Runx1t1 RUNX1 translocation partner 1
Cebpa CCAAT/enhancer binding protein (C/EBP), alpha
Cebpb CCAAT/enhancer binding protein (C/EBP), beta
Csnk2b casein kinase 2, beta polypeptide
Smc3 structural maintenance of chromosomes 3
Atn1 atrophin 1
Eif3a eukaryotic translation initiation factor 3, subunit A
Hnrnpk heterogeneous nuclear ribonucleoprotein K
Kin Kin17 DNA and RNA binding protein
Lmnb1 lamin B1
Matr3 matrin 3
Mbd1 methyl-CpG binding domain protein 1
Ncl nucleolin
Npm1 nucleophosmin 1
Ogg1 8-oxoguanine DNA-glycosylase 1
Pola1 polymerase (DNA directed), alpha 1
Psmb7 proteasome (prosome, macropain) subunit, beta type 7
Rad21 RAD21 cohesin complex component
Rfc1 replication factor C (activator 1) 1
Khdrbs1 KH domain containing, RNA binding, signal transduction associated 1
Ncor2 nuclear receptor co-repressor 2
Stag1 stromal antigen 1
Stag2 stromal antigen 2
Tep1 telomerase associated protein 1
Trp53 transformation related protein 53
Smc1a structural maintenance of chromosomes 1A
Xrn2 5'-3' exoribonuclease 2
Psma6 proteasome subunit alpha 6
Srrm1 serine/arginine repetitive matrix 1
Hnrnpu heterogeneous nuclear ribonucleoprotein U
Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1
Nono non-POU-domain-containing, octamer binding protein
Prrc2a proline-rich coiled-coil 2A
Ddx39b DEAD box helicase 39b
Zfp326 zinc finger protein 326
Tcerg1 transcription elongation regulator 1 (CA150)
Prpf40a pre-mRNA processing factor 40A
Rbm14 RNA binding motif protein 14
Akap8 A kinase (PRKA) anchor protein 8
Zfp276 zinc finger protein (C2H2 type) 276
Pias4 protein inhibitor of activated STAT 4
Hnrnph1 heterogeneous nuclear ribonucleoprotein H1
Fign fidgetin
Snw1 SNW domain containing 1
Rexo1 REX1, RNA exonuclease 1
Rbm25 RNA binding motif protein 25
Luc7l3 LUC7-like 3 (S. cerevisiae)
U2surp U2 snRNP-associated SURP domain containing
Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
Cdc5l cell division cycle 5-like (S. pombe)
Raver1 ribonucleoprotein, PTB-binding 1
Ddx42 DEAD box helicase 42
Cxxc1 CXXC finger 1 (PHD domain)
Hnrnpr heterogeneous nuclear ribonucleoprotein R
Morc2a microrchidia 2A
Naa15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit
Ckap5 cytoskeleton associated protein 5
Hnrnpm heterogeneous nuclear ribonucleoprotein M
Srrt serrate RNA effector molecule homolog (Arabidopsis)
Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
Hmgb2 high mobility group box 2
Cenpf centromere protein F
Dgkq diacylglycerol kinase, theta
Hlcs holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)
Foxp2 forkhead box P2
Supt16 SPT16, facilitates chromatin remodeling subunit
Ppig peptidyl-prolyl isomerase G (cyclophilin G)
Prr12 proline rich 12
Nsrp1 nuclear speckle regulatory protein 1
Ccdc142 coiled-coil domain containing 142
Iffo1 intermediate filament family orphan 1
Zmiz1 zinc finger, MIZ-type containing 1
Zfp703 zinc finger protein 703
Epg5 ectopic P-granules autophagy protein 5 homolog (C. elegans)
Symbol Function*
Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
Cebpa CCAAT/enhancer binding protein alpha
Cebpb CCAAT/enhancer binding protein beta
Tp53 tumor protein p53
Yy1 YY1 transcription factor
Npm1 nucleophosmin 1
Prkcz protein kinase C, zeta
Krt8 keratin 8
Matr3 matrin 3
Sptbn2 spectrin, beta, non-erythrocytic 2
Men1 menin 1
Smc3 structural maintenance of chromosomes 3
Atn1 atrophin 1
Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1
C1qbp complement C1q binding protein
Smc1a structural maintenance of chromosomes 1A
Basp1 brain abundant, membrane attached signal protein 1
Ppig peptidylprolyl isomerase G
Ctcf CCCTC-binding factor
Sf3b1 splicing factor 3b, subunit 1
Cdk4 cyclin-dependent kinase 4
Ddx39b DExD-box helicase 39B
Phb2 prohibitin 2
Akap8 A-kinase anchoring protein 8
Hnrnpm heterogeneous nuclear ribonucleoprotein M
Septin5 septin 5
Khdrbs1 KH RNA binding domain containing, signal transduction associated 1
Hnrnpu heterogeneous nuclear ribonucleoprotein U
Nsmf NMDA receptor synaptonuclear signaling and neuronal migration factor
Sfpq splicing factor proline and glutamine rich
Dgcr8 DGCR8 microprocessor complex subunit
Morc2 MORC family CW-type zinc finger 2
Mbd1 methyl-CpG binding domain protein 1
Cxxc1 CXXC finger protein 1
Ik IK cytokine
Krt18 keratin 18
Akap8l A-kinase anchoring protein 8 like
Pqbp1 polyglutamine binding protein 1
Rab11fip4 RAB11 family interacting protein 4
Pspc1 paraspeckle component 1
Dhx36 DEAH-box helicase 36
Stag2 stromal antigen 2
Upf3b UPF3B, regulator of nonsense mediated mRNA decay
Rad21 RAD21 cohesin complex component
Stag1 stromal antigen 1
Nono non-POU domain containing, octamer-binding
Hnrnpr heterogeneous nuclear ribonucleoprotein R
Ncor2 nuclear receptor co-repressor 2
Zmiz1 zinc finger, MIZ-type containing 1
Prr12 proline rich 12
Snrnp70 small nuclear ribonucleoprotein U1 subunit 70
Hnrnph3 heterogeneous nuclear ribonucleoprotein H3
Anp32e acidic nuclear phosphoprotein 32 family member E
Ampd2 adenosine monophosphate deaminase 2
Rbm39 RNA binding motif protein 39
Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1
Iffo1 intermediate filament family orphan 1
Srsf10 serine and arginine rich splicing factor 10
Xpo5 exportin 5
Zfx zinc finger protein X-linked
Fubp1 far upstream element binding protein 1
Zfp703 zinc finger protein 703
Eppk1 epiplakin 1
LOC681410 hypothetical protein LOC681410
Zfp326 zinc finger protein 326
Symbol Function*
hnrnpub heterogeneous nuclear ribonucleoprotein Ub
hnrnpua heterogeneous nuclear ribonucleoprotein Ua


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