Orthologous genes in OrthoFinder**

Species Gene Description
 mmu-u.4   Ddx28   DEAD box helicase 28 
 mmu-r.6   Ddx28   DEAD box helicase 28 
 mmu-m.5   Ddx28   DEAD box helicase 28 
 rno-u.3   Ddx28   DEAD-box helicase 28 
 hsa-u.4   DDX28   DEAD-box helicase 28 
 mcc-u.3   DDX28   DEAD-box helicase 28 
 cfa-u.3   DDX28   DEAD-box helicase 28 
 gga-u.3   DDX28   DEAD-box helicase 28 
 dre-u.3   ddx28   DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 
 dme-u.3   Dbp21E2   DEAD box protein 21E2 

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Top 50 coexpressed genes to Ddx28 (mmu-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 mmu4122   Sulfur relay system  2 8 3.63
 mmu61   Fatty acid biosynthesis  1 19 -
 mmu1212   Fatty acid metabolism  1 62 -
 mmu3013   Nucleocytoplasmic transport  1 118 -
 mmu3008   Ribosome biogenesis in eukaryotes  2 121 -

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mmu:Ddx28 (DEAD box helicase 28) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID CoexPub LINK Target Reference

mmu-u.4
for
Ddx28
mmu-r.6
for
Ddx28
mmu-m.5
for
Ddx28
rno-u.3
for
Ddx28
hsa-u.4
for
DDX28
mcc-u.3
for
DDX28
cfa-u.3
for
DDX28
gga-u.3
for
DDX28
dre-u.3
for
ddx28
dme-u.3
for
Dbp21E2
1 Lcmt2 leucine carboxyl methyltransferase 2 329504 0 7.9 6.8
 4.1
 6.8
 5.9
 4.1
 2.9
 1.7
 3.5
2 Cog8 component of oligomeric golgi complex 8 97484 0 7.2 7.1
 3.2
 7.5
 6.3
6.3
 3.0
 2.8
 0.7
3 Znhit2 zinc finger, HIT domain containing 2 29805 0 6.8 5.9
 3.5
 4.9
 5.6
 5.3
 2.2
 0.5
-0.6
 3.8
 3.7
4 Fkbpl FK506 binding protein-like 56299 0 6.5 6.0
 3.1
 5.2
 2.7
 -0.1
 1.1
 0.7
 2.5
5 Mrps30 mitochondrial ribosomal protein S30 59054 0 6.4 5.8
 3.1
 3.2
 4.2
 4.9
 2.9
 3.3
 2.6
 5.1
6 Thap11 THAP domain containing 11 59016 0 6.4 6.3
 2.8
 7.1
 5.7
 5.7
 8.1
 2.0
 3.3
7 Dus2 dihydrouridine synthase 2 66369 0 6.3 6.7
 2.6
 2.8
 7.2
 0.8
 6.2
 3.3
 3.7
 2.8
8 Brf2 BRF2, RNA polymerase III transcription initiation factor 50kDa subunit 66653 0 6.2 5.9
 2.9
 6.3
 3.9
 5.3
 2.6
 4.1
 2.1
9 Tbcc tubulin-specific chaperone C 72726 0 6.2 5.9
 2.9
 3.3
 5.5
 5.2
 2.0
 6.2
 4.0
 0.5
10 Nsmce3 NSE3 homolog, SMC5-SMC6 complex component 66647 0 6.1 6.0
 2.8
 4.4
0.0
 4.1
1.4
 3.1
2.0
 2.3
0.9
 -0.7
 -0.1
 0.9
11 Ctu1 cytosolic thiouridylase subunit 1 233189 0 6.1 6.0
 2.8
 3.3
 2.5
 2.5


1.4
12 Fbxo31 F-box protein 31 76454 0 6.0 5.3
 3.1
 0.2
 2.9
 2.4
 4.8
 0.2
 -0.4
13 Abt1 activator of basal transcription 1 30946 0 5.7 4.9
 3.0
 6.2
 6.2
 8.5
 1.7
2.9
 0.2
0.1
14 Rtf2 replication termination factor 2 66404 0 5.7 4.6
 3.1
 1.5
 -0.6
 -0.2
 0.3
 -1.0
 -0.4
 0.3
15 Exosc4 exosome component 4 109075 0 5.7 4.8
 3.0
 3.3
 3.0
 4.0
 1.6
 2.5
 2.2
 0.5
16 Mterf4 mitochondrial transcription termination factor 4 69821 0 5.5 5.3
 2.6
 5.2
4.0
 1.6
 2.3
 1.9
 2.3
17 Rpp25l ribonuclease P/MRP 25 subunit-like 69961 0 5.5 5.1
 2.6
 4.8
0.5
 4.0
2.9
 3.8
1.7
 3.6
1.8
 1.9
-1.0
 3.0
0.5
 1.7
18 Kti12 KTI12 homolog, chromatin associated 100087 0 5.5 5.5
 2.4
 5.9
3.5
 2.2
 3.6
 2.6
 1.7
19 Mcat malonyl CoA:ACP acyltransferase (mitochondrial) 223722 0 5.4 4.7
 2.8
 4.8
 4.1
 4.4
 2.8
 2.7
 4.4
 4.3
20 Hps6 HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 20170 0 5.4 5.9
 2.1
 2.2
 6.3
 8.1
 3.7
 1.1
 1.1
21 Mocs3 molybdenum cofactor synthesis 3 69372 0 5.3 6.3
 1.7
 4.2
 7.2
 7.5
 3.0
 4.4
 1.4
 2.5
22 Wdr53 WD repeat domain 53 68980 0 5.3 5.2
 2.4


3.2
 4.7
 2.6
23 Rnf113a2 ring finger protein 113A2 66381 0 5.2 4.6
 2.6
 5.7
1.3
 3.8
 5.1
 2.3
 -0.3
 1.9
 3.5
24 Nrbf2 nuclear receptor binding factor 2 641340 0 5.2 5.1
 2.3
 1.9
 1.4
 1.3
 1.6
 0.8
 -0.2
25 Champ1 chromosome alignment maintaining phosphoprotein 1 101994 0 5.2 4.8
 2.5
 2.8
 1.9
 1.5
 2.4
 0.2

26 Rnf113a1 ring finger protein 113A1 69942 0 5.1 4.0
 2.9
 5.7
1.3
 3.8
 5.1
 2.3
 -0.3
 1.9
 3.5
27 Smg8 SMG8 nonsense mediated mRNA decay factor 74133 0 5.1 5.2
 2.2
 4.8
 7.0
 5.7
 3.6
 4.8
 1.9
 1.8
28 Ngrn neugrin, neurite outgrowth associated 83485 0 5.0 4.1
 2.8
 1.9
 1.7
 1.2
 1.8
4.5
 5.4
29 Cstf1 cleavage stimulation factor, 3' pre-RNA, subunit 1 67337 0 5.0 4.9
 2.3
 9.8
 3.8
 6.2
 3.7
 4.2
 0.4
 5.6
30 Mrpl44 mitochondrial ribosomal protein L44 69163 0 5.0 4.6
 2.4
 4.0
 4.4
 4.4
 0.8
 4.4
 4.1
 3.7
31 Tsr3 TSR3 20S rRNA accumulation 68327 0 4.9 3.9
 2.7
 3.5
 2.4
 1.8
 0.9
 1.4
 3.0
 1.5
32 Trappc5 trafficking protein particle complex 5 66682 0 4.9 4.3
 2.5
 1.7
 -0.2
 1.0
 0.3
 1.0
 0.1
 -1.0
33 Mrm2 mitochondrial rRNA methyltransferase 2 68017 0 4.9 4.0
 2.7
 4.3
 3.5
 4.0
 3.6
 2.7
 4.3
 0.7
34 Mfsd5 major facilitator superfamily domain containing 5 106073 0 4.9 4.4
 2.4
 1.9
 4.5
 3.3
 1.6
 1.3
 0.9
35 Tmem115 transmembrane protein 115 56395 0 4.8 4.8
 2.1
 2.5
 2.7
 5.5
 3.0
 2.2
 1.5
 -2.5
36 Gpatch3 G patch domain containing 3 242691 0 4.8 5.2
 1.9
 4.3
 4.5
 2.9
 2.5
 1.7
 3.1
37 Nupl2 nucleoporin like 2 231042 0 4.8 4.5
 2.3
 2.2
 1.8
 4.1
 -0.9
 1.0
 1.8
38 Mettl18 methyltransferase like 18 69962 0 4.7 4.0
 2.5
 4.1
 3.9
 2.9
 2.1
 1.2
 3.6
 0.8
39 Phaf1 phagosome assembly factor 1 234678 0 4.7 4.5
 2.2
 2.4
 4.6
 2.1
 2.1
 1.8
 -0.4
 -1.2
40 Maip1 matrix AAA peptidase interacting protein 1 68115 0 4.7 3.8
 2.6
 4.0
 4.4
 4.1
 0.3
 3.5
 1.5
0.3
 2.0
41 Pop7 processing of precursor 7, ribonuclease P family, (S. cerevisiae) 74097 0 4.7 3.8
 2.5
 2.8
 3.5
 4.5

1.9
42 Prmt6 protein arginine N-methyltransferase 6 99890 0 4.7 4.6
 2.1
 3.0
 5.8
 3.9
 2.9
3.9
43 Lrrc14 leucine rich repeat containing 14 223664 0 4.6 4.9
 1.9
 1.7
 2.5
 2.9
 2.8
 1.0
 2.4
44 Commd5 COMM domain containing 5 66398 0 4.6 4.0
 2.4
 4.4
 3.7
 4.6
 2.6
 -0.6
 -0.5
45 Zbtb9 zinc finger and BTB domain containing 9 474156 0 4.6 4.6
3.2
 3.2
 3.2
 3.5
 1.1

46 Snapc2 small nuclear RNA activating complex, polypeptide 2 102209 0 4.6 4.6
 2.0
 -1.2
 0.7
 0.6
 1.7
0.3
47 Aar2 AAR2 splicing factor homolog 68295 0 4.6 4.2
 2.3
 4.2
 5.0
 5.0
 4.3
 3.6
 4.1
 2.0
48 Pex14 peroxisomal biogenesis factor 14 56273 0 4.6 4.4
 2.1
 1.7
 1.2
 -0.2
 0.8
 1.6
 1.3
 1.8
49 Wdr73 WD repeat domain 73 71968 0 4.6 3.8
 2.5
 2.4
 3.5
 1.4
 1.8
 0.0
 1.6
50 Mul1 mitochondrial ubiquitin ligase activator of NFKB 1 68350 0 4.5 4.2
 2.2






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