Orthologous genes in OrthoFinder**

Species Gene Description
 cfa-u.3   NID1   nidogen 1 
 cfa-r.3   NID1   nidogen 1 
 cfa-m.4   NID1   nidogen 1 
 cfa-u.3   NID2   nidogen 2 
 hsa-u.4   NID1   nidogen 1 
 hsa-u.4   NID2   nidogen 2 
 mmu-u.4   Nid2   nidogen 2 
 mmu-u.4   Nid1   nidogen 1 
 rno-u.3   Nid1   nidogen 1 
 rno-u.3   Nid2   nidogen 2 
 mcc-u.3   NID2   nidogen 2 
 mcc-u.3   NID1   nidogen 1 
 gga-u.3   NID1   nidogen 1 
 gga-u.3   NID2   nidogen 2 
 dre-u.3   nid2a   nidogen 2a (osteonidogen) 
 dre-u.3   nid1a   nidogen 1a 
 dme-u.3   Ndg   Nidogen/entactin 
 cel-u.3   nid-1   NIDogen (basement membrane protein) 
 spo-u.3   sec61   translocon alpha subunit Sec61 

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Top 50 coexpressed genes to NID1 (cfa-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 cfa5165   Human papillomavirus infection  13 291 6.45
 cfa4974   Protein digestion and absorption  12 89 6.38
 cfa4510   Focal adhesion  12 189 6.81
 cfa4151   PI3K-Akt signaling pathway  12 300 6.34
 cfa4512   ECM-receptor interaction  11 85 6.50

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cfa:NID1 (nidogen 1) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

cfa-u.3
for
NID1
cfa-r.3
for
NID1
cfa-m.4
for
NID1
cfa-u.3
for
NID2
hsa-u.4
for
NID1
hsa-u.4
for
NID2
mmu-u.4
for
Nid2
mmu-u.4
for
Nid1
rno-u.3
for
Nid1
rno-u.3
for
Nid2
mcc-u.3
for
NID2
mcc-u.3
for
NID1
gga-u.3
for
NID1
gga-u.3
for
NID2
dre-u.3
for
nid2a
dre-u.3
for
nid1a
dme-u.3
for
Ndg
cel-u.3
for
nid-1
spo-u.3
for
sec61
1 ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 487713 5.6 2.1
 4.0
 1.1
 2.9
 2.1
 3.2
 3.8
 4.2
 2.5
 0.9
 1.8
 3.7
 0.9
 0.1
 0.6
 1.0
 3.3
2 COL4A2 collagen type IV alpha 2 chain 403843 4.8 1.7
 3.6
 7.4
6.0
 5.9
5.3
 6.1
6.0
 4.7
4.1
 10.0
7.9
 10.5
7.9
 7.9
6.4
 3.0
2.5
 5.3
5.1
 6.1
5.6
 4.9
3.3
 4.6
3.0
 3.5
2.3
 2.4
2.1
 5.2
4.2
 0.9
0.3
3 SVEP1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 474799 4.7 2.0
 3.1
 3.1
 2.0
 4.1
 3.1
 3.9
 4.1
 3.4
 1.2
 1.3
 5.5
 2.7

-0.4
 0.1
4 COL6A1 collagen type VI alpha 1 chain 403668 4.6 2.6
 2.2
 2.9
 3.9
 3.6
 2.7
 4.2
 4.3
 5.2
 0.6
 4.5
 3.9
 5.4
 3.1
 5.0
-1.2
-1.3
5 FBLN2 fibulin 2 484634 4.6 3.4
 1.2
 1.1
 2.9
 2.9
 1.8
 4.3
 2.9
 2.5
 1.8
 1.2
 2.4
 2.8
 4.8
 2.2
 1.5

6 PDGFRB platelet derived growth factor receptor beta 442985 4.6 1.8
 3.2
 2.1
 4.5
 4.3
 4.2
 4.2
 4.6
 3.6
 0.7
 1.3
 2.4
 2.4
 2.7
 1.0


7 COL3A1 collagen type III alpha 1 chain 478835 4.5 2.5
 2.2
 4.2
3.1
 3.4
3.2
 5.8
5.6
 4.7
3.8
 8.5
7.0
 9.4
8.5
 7.5
7.4
 2.5
2.1
 6.8
6.0
 4.3
3.9
 6.2
5.9
 3.9
3.5
 3.8
3.0

0.8
-1.0
8 COL6A2 collagen type VI alpha 2 chain 100856491 4.4 2.4
2.3
 3.6
 4.0
 3.3
 3.9
 4.5
 5.1
 1.9
 4.2
 2.5
 4.0
 3.7
 3.4
1.0
-1.6
9 PXDN peroxidasin 100687809 4.4 2.4
1.9
1.1
 2.9
 4.6
 2.8
 3.8
 6.2
 4.8
 2.2
0.1
 2.8
0.9
 4.6
2.2
 4.2
0.8
 3.0
 0.5
 1.7
 3.4
1.9
10 IGFBP4 insulin like growth factor binding protein 4 608158 4.4 2.2
 2.5
 1.3
 4.0
 2.7
 0.8
 0.7
 1.9
 0.7
 -0.8
 3.3
 0.6
 0.7
 -0.6
-0.6
 1.0
0.6


11 COL4A1 collagen type IV alpha 1 chain 403496 4.4 1.6
 3.2
 7.4
6.0
 5.9
5.3
 6.1
6.0
 4.7
4.1
 10.0
7.9
 10.5
7.9
 7.9
6.4
 3.0
2.5
 5.3
5.1
 6.1
5.6
 4.9
3.3
 4.6
3.0
 3.5
2.3
 2.4
2.1
 5.2
4.2
 0.9
0.3
12 MCAM melanoma cell adhesion molecule 489368 4.3 2.2
 2.3
 3.4
 2.3
 1.6
 3.5
 4.6
 3.1
 2.7
 0.7
 2.4
 1.8
 2.1
 1.1
0.1
 1.2
0.5


13 LAMA4 laminin subunit alpha 4 475034 4.2 1.8
 2.8
 4.7
 4.1
 5.3
 5.1
 7.3
 5.5
 5.8
 2.4
 5.0
 4.3
 3.1
 3.3
 2.7


14 SERPINF1 serpin family F member 1 611276 4.2 1.8
 2.8
 2.2

1.4
 1.5
 2.8
 2.4
 -0.9
 2.4
 0.7
 0.9
 0.7
 3.2


15 COL5A3 collagen type V alpha 3 chain 484961 4.1 1.4
 3.1
 3.0
 2.2
 2.8
 3.7
 4.0
 2.9
 3.8
 0.4
 0.4






16 NID2 nidogen 2 480322 4.0 0.8
 3.9
 4.0
 5.3
 5.3
 6.4
 6.4
 10.2
 10.2
 2.5
 2.5
 4.6
 4.6
 2.3
 2.3


17 COL1A1 collagen type I alpha 1 chain 403651 4.0 2.5
 1.7
 4.2
3.1
 3.4
3.2
 5.8
5.6
 4.7
3.8
 8.5
7.0
 9.4
8.5
 7.5
7.4
 2.5
2.1
 6.8
6.0
 4.3
3.9
 6.2
5.9
 3.9
3.5
 3.8
3.0

0.8
-1.0
18 MMP14 matrix metallopeptidase 14 403823 4.0 2.0
 2.2
 2.1
0.9
 3.8
1.6
 1.6
1.2
 1.6
1.1
 3.0
0.6
 5.0
1.0
 3.0
1.0
 1.7
0.7
 2.3
0.5
 1.1
0.9
 2.9
1.7
 3.5
3.5
 2.8
2.0
 0.8
-0.8
19 COL6A3 collagen type VI alpha 3 chain 403582 4.0 1.9
 2.4
 3.4
 2.9
 5.4
 3.6
 5.7
 7.0
 5.6
 0.4
 4.4
 3.9
 5.0
 3.8
2.5
 4.1
2.0


20 COL15A1 collagen type XV alpha 1 chain 474778 3.9 2.0
 2.2
 6.2
 2.2
 5.0
 4.7
 3.6
 3.1
 4.1
 1.1
 3.6
 1.5
-0.3
 -0.1
-0.4
 2.3
 0.0
 -0.1
 1.5
 -0.7
21 COL12A1 collagen type XII alpha 1 chain 481881 3.9 1.4
 3.0
 3.0
1.4
 2.0
 3.3
 2.1
 3.0
 6.2
 5.0
 0.1
 4.2
 2.2
 1.7
 3.6
 2.2


22 FBN1 fibrillin 1 478293 3.8 2.0
 2.1
 3.5
 3.5
 5.6
 3.7
 5.2
 7.4
 5.8
 1.4
 5.5
 4.1
 3.4
 3.0
 2.1


23 EMILIN2 elastin microfibril interfacer 2 100684071 3.8 2.1
1.7
 2.5
 2.1
 0.4
 1.4
 0.9
 1.5
 0.9
 -0.1
 1.3
 2.8
 2.4
 0.6


24 SPARC secreted protein acidic and cysteine rich 100855736 3.8 2.0
1.3
1.2
 4.2
0.4
 3.1
-0.1
 3.9
1.8
 7.7
2.9
 7.1
1.9
 4.2
0.9
 -0.0
-0.1
 3.8
1.7
 3.0
2.8
 4.7
4.6
 0.7
0.1
 1.8
0.3
 2.0
 4.3
25 ADAM19 ADAM metallopeptidase domain 19 489156 3.7 3.0
 0.5
 3.5
1.2
 2.2
1.5
 4.1
2.3
 3.4
2.5
 4.2
3.1
 5.2
1.6
 4.2
1.5
 3.0
0.9
 2.2
1.8
 1.7
0.8
 2.9
2.5
 3.8
1.4
 1.2
-0.1
 0.3
-0.1
 -0.1
-0.3
 0.3
26 LRP1 LDL receptor related protein 1 481124 3.6 1.2
 2.8
 0.7
0.4
 5.4
-0.7
 1.5
0.1
 1.6
-1.4
 1.2
-0.8
 2.1
0.5
 1.3
-0.9
 0.5
-1.4
 2.0
-0.6
 1.9
-0.6
 2.3
0.2
 1.9
0.9
 3.0
0.4
 0.6
 3.6
27 LAMA2 laminin subunit alpha 2 100683420 3.6 1.9
1.4
0.9
 3.0
1.6
 3.7
1.6
 2.9
1.9
 5.4
3.2
 5.4
1.4
 4.6
2.5
 2.0
1.5
 5.3
1.7
 4.1
2.6
 2.7
2.2
 4.8
2.1
 2.8
0.1
 1.3
 3.0
28 MATN2 matrilin 2 491431 3.5 0.8
 3.3
 3.7
1.5
 1.6
1.3
 1.2
0.9
 3.1
1.7
 1.9
-0.2
 1.1
0.6
 1.7
0.7
 0.8
0.7
 1.9
0.3
 4.8
1.0
 2.5
1.0
 2.1
1.7
 2.9
2.1
3.8
3.7
 2.7
-0.2
29 FAM114A2 family with sequence similarity 114 member A2 489167 3.5 1.8
 1.9
 1.8
1.8
 1.2
-0.4
 1.3
0.2
 2.4
0.4
 1.7
-0.4
 2.2
 1.6
 0.5
-0.0
 1.8
0.6
 0.9
-0.6
 1.0
-1.5
 1.3
-0.3
 1.2
1.0
 -0.7

30 OLFML1 olfactomedin like 1 476839 3.5 1.5
 2.4
 0.6

1.9
 1.2
 2.4
 1.3
 0.7
 1.6
 2.3
 0.4




31 LAMC1 laminin subunit gamma 1 480034 3.5 1.3
 2.7
 3.5
0.2
 5.8
1.1
 3.7
1.3
 5.9
1.0
 7.9
2.8
 5.7
0.9
 5.3
2.8
 2.0
0.4
 6.2
0.9
 4.7
2.1
 4.2
0.6
 6.2
1.3
 2.8
0.2
 3.0
 3.2
32 FSTL1 follistatin like 1 608384 3.5 1.2
 2.7
 4.9
 4.1
 3.7
 2.7
 5.9
 8.5
 4.4
 1.3
 5.7
 4.4
 3.7
 3.9
 1.1


33 SPTAN1 spectrin alpha, non-erythrocytic 1 403484 3.5 1.2
 2.7
 0.4
-0.8
 0.4
-0.1
 0.6
-0.2
 1.5
0.5
 2.3
0.2
 1.3
-0.2
 1.1
-0.1
 0.4
-1.1
 0.0
-0.7
 0.1
 0.9
 1.5
 0.2
 1.0
 2.4
34 COL16A1 collagen type XVI alpha 1 chain 487318 3.4 1.5
 2.2
 1.3
 1.3
 2.3
 1.1
 1.4
 1.8
 3.3
 1.3
 1.9
 1.7
 3.7
 2.4
 1.4


35 ADAMTSL4 ADAMTS like 4 483184 3.4 2.3
 1.1
 1.0
 1.3
 0.2
 0.9
 1.8
 0.5
 1.3
 0.0
 1.6






36 TSPAN18 tetraspanin 18 611375 3.4 2.0
 1.6
 1.9
 3.4
 3.4
 2.7
 2.0
 1.7
 1.9

1.0
 0.2
 -0.0
-0.5
 1.4
0.2


37 CRIM1 cysteine rich transmembrane BMP regulator 1 475723 3.4 1.0
 2.8
 0.6
 1.2
 0.4
 0.6
 1.8
 1.3
 0.7
 -1.9
 1.1
 0.2
 -0.1
 -0.4
 1.3
 0.6
-0.1
 -0.0
 -1.1
38 COL1A2 collagen type I alpha 2 chain 403824 3.4 1.8
 1.7
 4.2
3.1
 3.4
3.2
 5.8
5.6
 4.7
3.8
 8.5
7.0
 9.4
8.5
 7.5
7.4
 2.5
2.1
 6.8
6.0
 4.3
3.9
 6.2
5.9
 3.9
3.5
 3.8
3.0

0.8
-1.0
39 SLIT3 slit guidance ligand 3 489132 3.3 1.9
 1.6
 1.6
0.4
 1.8
1.0
 3.1
1.9
 2.1
0.7
 2.5
1.4
 1.3
1.3
 1.3
0.6
 0.3
0.0
 1.9
1.9
 2.4
0.5
 2.0
1.1
 4.1
3.3
 1.3
1.2
 0.9
 0.5
40 THBS2 thrombospondin 2 484087 3.3 1.8
 1.6
 1.4
0.7
 3.1
1.9
 2.5
2.0
 2.0
1.4
 3.8
1.5
 3.8
1.7
 2.6
1.5
 1.4
-0.9
 2.7
2.0
 2.2
0.6
 1.8
0.7
 2.9
2.7
 3.5
2.7
-0.2
41 EPAS1 endothelial PAS domain protein 1 474578 3.2 1.1
 2.5
 2.1
1.2
 1.9
0.8
 2.5
2.0
 2.5
0.1
 3.3
0.4
 1.7
1.5
 0.8
0.3
 3.1
1.2
 1.4
-0.1
 2.5
-0.4
 1.4
1.2
 2.1
0.8
 1.7
1.2
 0.2
 0.3
42 RND3 Rho family GTPase 3 483917 3.2 1.6
 1.9
 0.9
 -0.0
 -0.0
 0.6
 1.1
 0.9
 -0.1
 -1.0
 2.0
 2.8
 1.2
 0.4
 0.2


43 STOM stomatin 612719 3.2 0.8
 2.9
 1.9
 1.7
-1.4
 0.4
-0.8
 0.8
-0.8
 1.3
-0.3
 2.5
 1.7
 -1.9
 1.2
 1.0
0.2
 0.8
-0.4
 0.9
0.5
 0.8
0.3
 0.6
0.5
 0.3
-0.3
44 VCAN versican 488922 3.2 2.2
 1.1
 2.6
 4.4
 2.2
 0.6
 2.3
 2.8
 1.6
 2.0
 2.1
 0.4
 2.7




45 NOTCH2 notch receptor 2 483148 3.2 1.0
 2.6
 0.4
 1.0
0.1
 0.6
-0.5
 1.7
 1.3
 2.0
 1.3
 -0.6
 1.1
 1.1
 0.8
 5.8
 0.1
 0.3
-0.6
46 JCAD junctional cadherin 5 associated 477964 3.1 1.2
 2.3
 1.8
 1.9
 3.7
 1.9
 4.2
 0.6
 0.4
 0.2
 1.7
 2.2
 -0.0
 1.1
0.5
 1.4
0.2


47 TNS1 tensin 1 488519 3.1 1.9
 1.4
 1.8
 2.3
 1.0
 1.0
 3.4
 3.0
 2.1
 1.6
 0.7
 -0.7
 1.6
 -0.6
 1.2


48 CD248 CD248 molecule 483712

















49 RCN3 reticulocalbin 3 484379 3.1 0.9
 2.6
 3.9
 2.3
 3.0
 3.9
 3.8
 2.9
 3.4
 1.8
1.0
 1.2
1.2






50 NRP1 neuropilin 1 477955 3.1 0.8
 2.7
 3.0
 2.6
 2.0
 2.2
 0.9
 2.2
 1.3
 0.4
 2.6
 3.3
 2.2
 2.1
 -0.3


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