Orthologous genes in OrthoFinder**

Species Gene Description
 dre-u.3   rfc5   replication factor C (activator 1) 5 
 dre-r.3   rfc5   replication factor C (activator 1) 5 
 dre-m.5   rfc5   replication factor C (activator 1) 5 
 hsa-u.4   RFC5   replication factor C subunit 5 
 mmu-u.4   Rfc5   replication factor C (activator 1) 5 
 rno-u.3   Rfc5   replication factor C subunit 5 
 gga-u.3   RFC5   replication factor C subunit 5 
 mcc-u.3   RFC5   replication factor C subunit 5 
 cfa-u.3   RFC5   replication factor C subunit 5 
 dme-u.3   RfC3   Replication factor C subunit 3 
 cel-u.3   F44B9.8   putative replication factor C subunit 5 
 sce-u.3   RFC3   replication factor C subunit 3 
 spo-u.3   SPCC4B3.09c   putative mitochondrial ribosomal protein subunit L12 

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Top 50 coexpressed genes to rfc5 (dre-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 dre3030   DNA replication  20 37 7.52
 dre3430   Mismatch repair  12 21 6.73
 dre3420   Nucleotide excision repair  11 43 7.18
 dre3410   Base excision repair  7 37 7.52
 dre3440   Homologous recombination  6 37 7.52

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dre:rfc5 (replication factor C (activator 1) 5) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

dre-u.3
for
rfc5
dre-r.3
for
rfc5
dre-m.5
for
rfc5
hsa-u.4
for
RFC5
mmu-u.4
for
Rfc5
rno-u.3
for
Rfc5
gga-u.3
for
RFC5
mcc-u.3
for
RFC5
cfa-u.3
for
RFC5
dme-u.3
for
RfC3
cel-u.3
for
F44B9.8
sce-u.3
for
RFC3
spo-u.3
for
SPCC4B3.09c
1 rfc2 replication factor C (activator 1) 2 503748 11.9 6.2
9.7
 8.1
 8.7
 4.0
 5.0
 3.4
 6.7
 3.4
 4.9
 1.5
2 hat1 histone acetyltransferase 1 447833 8.6 5.0
 2.8
 2.7
 5.8
 5.7
 2.1
 1.5
 0.8
 1.3
 6.6
 -0.3
 0.6
3 rpa2 replication protein A2 65226 8.4 4.9
 2.7
 5.9
 8.2
 9.6
 1.4
 1.9
 2.2
 5.3
 4.5
-0.8
 3.0
4 cenpu centromere protein U 795266 8.3 4.3
5.3
 5.1
 3.0
 1.1
 2.9
 2.5



5 rfc4 replication factor C (activator 1) 4 406435 8.1 4.5
 2.9
 7.5
 6.7
 7.1
 4.7
 2.7
 2.9
 6.6
 9.0
 3.2
6 prim1 DNA primase subunit 1 30440 8.1 4.4
 3.0
 10.0
 8.2
 6.2
 5.7
 1.7
 2.0
 4.4
 4.6
2.4
 2.9
 -0.3
7 gins1 GINS complex subunit 1 (Psf1 homolog) 450061 7.9 5.1
 2.1
 4.9
 5.6
 5.3
 6.1
 3.1
 5.2
 1.3
 5.3
 0.8
 -1.9
8 nsmce2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase 564644 7.8 4.1
-0.4
 1.4
 1.4
 -0.2
 1.4
 0.3
 1.4
1.1
 4.2
 0.5
 -0.3
9 prim2 DNA primase subunit 2 407653 7.6 4.0



2.9
 2.7
 2.6
 6.0
 0.9
 2.8
10 zwilch zwilch kinetochore protein 336439 7.6 4.1
 2.9
 5.3
 6.1
 4.6
 3.2
 4.2
 2.5
 2.3
 3.5

11 orc4 origin recognition complex, subunit 4 406462 7.5 4.3
 2.6
 0.7
 -0.9
 -0.2
 3.5
 -0.9
 0.1
 4.7
0.7
 0.3
12 dscc1 DNA replication and sister chromatid cohesion 1 447872 7.2 3.8
4.7
 6.2
 5.1
 1.5
 4.2
 4.4
 2.9
 4.5
 2.2
 -0.8
13 pcna proliferating cell nuclear antigen 30678 7.1 4.1
 2.4
 7.0
 5.5
 4.7
 3.0
 3.7
 2.6
 5.4
-0.5
 3.2
 2.8
 0.6
14 cdk2 cyclin-dependent kinase 2 406715 7.1 3.6
 2.9
 8.1
3.4
 4.7
3.8
 3.4
1.3
 7.0
2.7
 4.2
2.6
 1.6
0.6
 4.8
4.6
 5.6
2.1
 5.1
1.9
15 rpa1 replication protein A1 327491 6.8 3.7
 2.5
 6.0
 6.5
 5.8
 2.7
 1.1
 2.2
 3.6
 3.8
 3.7
16 fen1 flap structure-specific endonuclease 1 386707 6.6 4.2
 1.8
 7.0
 6.8
 7.8
 4.1
 6.6
 4.4
 9.3
 3.0
 4.1
17 rpa3 replication protein A3 393196 6.6 3.2
 2.8
 4.7
 4.0
 5.3
 2.3
 1.8
 1.7



18 nudt1 nudix (nucleoside diphosphate linked moiety X)-type motif 1 406727 6.6 3.0
 3.0
 2.1
 5.2
 3.5
 3.7
 1.9
 3.8



19 pold1 polymerase (DNA directed), delta 1, catalytic subunit 556456 6.4 3.7
 2.3
 4.8
 5.3
 5.7
 3.6
 0.7
 4.1
 6.1
 2.7
 1.1
 -0.2
20 stmn1a stathmin 1a 678630 6.3 3.3
3.3
0.5
 3.8
0.2
 1.5
0.7
 3.5
-0.4
 2.4
0.1
 1.4
-0.1
 1.1

1.4
-1.9
21 swi5 SWI5 homologous recombination repair protein 100333759 6.2 3.3
0.8
 0.5
 1.0
-0.5
 -0.7
 1.4


22 mcm4 minichromosome maintenance complex component 4 337598 6.2 3.5
 2.2
 8.4
 6.2
 7.4
 4.2
 6.2
 2.4
 5.3
 2.2
 1.6
 -1.6
23 chtf8 CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) 555570 6.2 2.9
 2.8


4.6

4.5
 3.8

24 rnaseh2b ribonuclease H2, subunit B 393241 6.1 3.7
 1.9
 1.7
 4.0
 4.7
 1.9
 2.1
 0.7
 4.0
 5.7

25 rnaseh2a ribonuclease H2, subunit A 393195 6.1 3.5
 2.1
 7.4
 3.4
 0.3
3.7
 1.8
 3.0
 7.4
 3.5
26 dsn1 DSN1 homolog, MIS12 kinetochore complex component 100002916 6.0 3.2
8.6
 3.7
4.9
 3.7
 4.6



27 nup37 nucleoporin 37 436892 6.0 3.2
 2.3
 5.6
 4.2
 1.7
 2.2
 2.9
 2.4
 7.0


28 rfc1 replication factor C (activator 1) 1 100037336 6.0 3.1
 2.5
 1.3
 3.9
 2.1
 2.3
 3.0
 2.2
 3.0
 1.3
 1.8
29 primpol primase and polymerase (DNA-directed) 556571 6.0 3.3
 2.2
 2.1
 1.3
 2.1
 2.2
 0.0
 -1.2



30 orc5 origin recognition complex, subunit 5 406479 6.0 3.7
 1.8
 1.0
 1.4
 -0.1
 1.8
 1.3
 0.4
 6.7
 3.7
 0.4
31 dhfr dihydrofolate reductase 81882 5.9 3.2
 2.2
 7.0
1.6
 7.3
 6.0
 3.6
 1.6
1.0
 1.0
0.4
 2.8
 5.4
 0.3
32 msh2 mutS homolog 2 (E. coli) 406845 5.9 3.4
 2.0
 5.3
 4.3
 6.7
 3.8
 0.9
 1.8
 1.2
 4.4
 3.1
 0.1
33 parp1 poly (ADP-ribose) polymerase 1 560788 5.9 3.1
2.0
 3.2
 1.2
 2.6
 1.0
 0.8
 0.6
 0.3

34 rfc3 replication factor C (activator 1) 3 259256 5.9 3.5
 2.0
 8.4
 7.7
 7.9
 2.6
 1.4
 4.2
 4.7
 7.5
 4.1
 2.0
35 ncaph2 non-SMC condensin II complex, subunit H2 562678 5.9 3.1
5.1
 4.5
 5.9
 6.6
 3.3
 0.4
2.5

36 rnaseh2c ribonuclease H2, subunit C 100005387 5.8 3.0
 2.3
 2.7
 1.7
 3.9
0.2
 -0.1
 5.9
 2.6

37 pold2 polymerase (DNA directed), delta 2, regulatory subunit 796456 5.7 2.4
 2.8
 3.2
 3.8
 3.8
 8.5
 2.1
 1.3
 5.1
 6.7
 4.1
 2.7
38 zgc:110224 zgc:110224 550335 5.6 3.0
3.6
 2.6
 3.8
 5.0
 2.3
 1.1



39 esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 445395 5.6 3.1
 2.1
 3.2
-2.6
 3.1
-0.2
 3.5
-0.6
 3.6
-1.0
 3.3
-0.8
 1.8
-0.8
 1.3
 4.9
 2.8
40 mnd1 meiotic nuclear divisions 1 homolog (S. cerevisiae) 445203 5.5 2.9
1.8
 2.0
 3.1
 1.5
 3.0
 1.2

-0.4
41 cks1b CDC28 protein kinase regulatory subunit 1B 445199 5.5 3.5
 1.6
 3.5
0.1
 4.0
3.3
 4.3
2.6
 4.1
1.9
 1.6
1.3
 3.2
0.6
 3.3
0.6
 3.7
-0.3
 2.3
42 chaf1b chromatin assembly factor 1, subunit B 406285 5.5 3.6
 1.4
 8.4
 6.5
 3.8
 3.8
 5.0
 4.4
 5.1
 2.8
 3.9
 -0.3
43 haus8 HAUS augmin like complex subunit 8 555850 5.5 2.9
5.8
 1.9
3.4
 2.3
 1.7



44 msh6 mutS homolog 6 (E. coli) 260437 5.5 3.6
 1.5
 5.0
 4.5
 2.8
 2.5
 2.1
 0.9
 4.7
 2.6
 0.9
 1.9
45 pola2 polymerase (DNA directed), alpha 2 322059 5.5 3.1
 1.9
 9.8
 4.4
 2.9
 5.7
 5.0
 3.8
 5.4
 2.2
 1.8
46 rad50 RAD50 homolog, double strand break repair protein 553029 5.4 2.9
-1.6
 3.1
 1.7
 0.4
 0.9
 -0.7
 1.5
 0.9
 -0.3
47 mcm5 minichromosome maintenance complex component 5 286747 5.3 3.1
 1.8
 7.6
 9.8
 5.8
 7.9
 5.8
 3.2
 5.4
 3.4
 0.5
 -0.6
48 pole2 polymerase (DNA directed), epsilon 2 192320 5.3 2.7
 2.2
 5.9
 5.8
 3.1
 4.9
 3.0
 0.8
 4.1
 4.4
 3.1
 -0.3
49 fancd2 FA complementation group D2 394241 5.3 2.8
6.8
 5.0
 4.5
 3.8
 3.7
 3.1
 2.5
 2.5
-0.1
50 gins2 GINS complex subunit 2 554146 5.2 2.8
 2.0
 6.9
 6.7
 5.0
 3.4
 4.7
 4.3
 0.6
 4.5
 1.1
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