Orthologous genes in OrthoFinder**

Species Gene Description
 spo-u.3   rpn8   putative proteasome regulatory subunit Rpn8 
 spo-r.3   rpn8   putative proteasome regulatory subunit Rpn8 
 spo-m.4   rpn8   putative proteasome regulatory subunit Rpn8 
 sce-u.3   ATG5   Atg5p 
 hsa-u.4   ATG5   autophagy related 5 
 mmu-u.4   Atg5   autophagy related 5 
 rno-u.3   Atg5   autophagy related 5 
 gga-u.3   ATG5   autophagy related 5 
 dre-u.3   atg5   ATG5 autophagy related 5 homolog (S. cerevisiae) 
 dme-u.3   Atg5   Autophagy-related 5 
 cel-u.3   atg-5   Autophagy-related protein 5 
 mcc-u.3   ATG5   autophagy related 5 
 cfa-u.3   ATG5   autophagy related 5 

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Top 50 coexpressed genes to rpn8 (spo-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 spo3050   Proteasome  20 36 6.19
 spo4144   Endocytosis  5 67 3.50
 spo4138   Autophagy - yeast  4 69 2.47
 spo3015   mRNA surveillance pathway  2 50 -
 spo3013   Nucleocytoplasmic transport  2 65 -

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spo:rpn8 (putative proteasome regulatory subunit Rpn8) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

spo-u.3
for
rpn8
spo-r.3
for
rpn8
spo-m.4
for
rpn8
sce-u.3
for
ATG5
hsa-u.4
for
ATG5
mmu-u.4
for
Atg5
rno-u.3
for
Atg5
gga-u.3
for
ATG5
dre-u.3
for
atg5
dme-u.3
for
Atg5
cel-u.3
for
atg-5
mcc-u.3
for
ATG5
cfa-u.3
for
ATG5
1 pre10 putative proteasome core particle subunit alpha 7 Pre10 2539378 SPCC1795.04c 6.6 3.5
 8.2
 -0.9
 -0.8
 1.7
 -1.0
 -2.6
 1.2
-0.2
 -2.6
 0.3
-1.4
 -1.0
 0.0
2 SPBC646.16 putative proteasome core particle subunit alpha 1 2541139 SPBC646.16 6.6 4.9
 5.7
-0.3
-0.9
 -1.0
-1.2
 -0.0
-0.8
 0.0
-1.9
 0.5
-0.6
 0.7
1.2
1.1
 0.2
-0.4
3 rpn3 19S proteasome regulatory subunit Rpn3 2540109 SPBC119.01 5.8 4.8
 4.3
 -1.1
 -2.2
 1.2
 0.1
 -0.3
 1.8
 0.7
 1.5
 0.8
 0.1
4 rpt3 putative proteasome regulatory subunit Rpt3 2539539 SPCC576.10c 5.6 3.5
 6.1
-0.6
 -0.6
 2.1
 -1.1
 0.2
 0.9
-0.7
 -0.2
 1.1
 -0.8
5 pre6 20S proteasome component alpha 4 Pre6 2540175 SPBC106.16 5.4 3.9
 5.0
 -0.3
 1.8
1.2
 -0.3
-1.5
 0.3
-0.3
 2.3
-0.7
 0.5
0.3
0.9
-1.0
 1.3
-0.1
 1.4
-0.0
6 SPBC2F12.10 putative mitochondrial ribosomal protein subunit L35 2540365 SPBC2F12.10 5.3 3.1
 6.1









7 ppa2 serine/threonine protein phosphatase Ppa2 2540072 SPBC16H5.07c 5.0 3.6
 4.5
0.7
0.2
 0.5
0.1
 0.5
0.3
 -0.1


-0.2
-0.3
 0.9
0.7
8 pre8 putative proteasome core particle subunit alpha 2 Pre8 2539026 SPCC1442.06 4.9 3.8
 4.1
2.1
 1.2
 -1.0
 0.7
-0.7
 1.2
0.1
 3.4
 1.4
 -0.3
 0.8
9 rpt2 19S proteasome regulatory subunit Rpt2 2540939 SPBC4.07c 4.9 4.3
 3.1



1.0
 -0.5
 -0.2
0.1
 -0.7
10 cam1 calmodulin Cam1 2543039 SPAC3A12.14 4.7 2.7
 5.5









11 rpn9 19S proteasome regulatory subunit Rpn9 2543114 SPAC607.05 4.7 4.8
 1.8
-0.1
 0.2
 1.8
 -0.3
 0.2
-1.3
 1.4
 0.5
 0.6
12 rpn11 19S proteasome regulatory subunit Rpn11 2543040 SPAC31G5.13 4.6 3.4
 4.2
-0.3
 1.5
 1.1
 -1.0
 -0.0
 3.1
0.3
 -0.6
 0.9
 -0.4
13 caf1 CCR4-Not complex CAF1 family ribonuclease subunit Caf1 2539041 SPCC18.06c 4.5 3.7
 3.3
 0.6
 1.4
1.1
 0.1
-0.4
 1.4
-0.9
 2.0
-0.6
 0.1
-0.9
 -2.7
 0.9
 2.0
0.8
 1.9
0.6
14 arp2 ARP2/3 actin-organizing complex subunit Arp2 5802965 SPAC11H11.06 4.5 1.8
 6.8

-0.7
 -0.1
 0.7
-0.8
 -1.1
 -0.5
 -0.4
 -0.1
 -0.3
15 pup3 putative proteasome core particle subunit beta 3 Pup3 2539401 SPCC63.12c 4.4 3.3
 3.9
 1.3
 0.3
 1.7
 1.3
 -2.5
 -0.1
 -1.3
 1.2
 -0.5
 1.5
16 SPBC31F10.16 putative ChAPs family protein 2540240 SPBC31F10.16 4.4 2.7
 4.8









17 SPBC365.01 putative sec14 family protein 2541046 SPBC365.01 4.4 3.0
 4.3
 -0.1
 0.2
 -0.6
 1.5
 0.6
 1.3
-0.9
1.1
0.7
 1.2
 0.8
18 mud1 UBA domain protein Mud1 3361477 SPAC56F8.08 4.4 2.7
 4.8
 0.2
 1.2
 1.3
0.4
 4.1
0.4
 -0.2
-2.6
 -0.2
-0.9
 0.4
 1.5
 1.2
0.3
 -0.4
-1.8
19 vps1 dynamin family protein Vps1 2542724 SPAC767.01c 4.3 3.2
 3.8
-0.2
-0.5
 0.9
-0.9
 -0.1
-0.5
 0.2
-0.1
 -0.9
-1.2

-0.9
-1.0
 1.6
0.6
20 arp3 actin-like protein Arp3 2543233 SPAC630.03 4.3 1.4
 7.1
 -0.8
 0.7
 1.2
0.4
 0.4
0.2
 1.1
0.6
 0.9
0.4
 0.9
 1.4
 1.2
-0.6
 3.1
-2.0
21 SPAC13C5.01c putative proteasome core particle subunit alpha 3 3361518 SPAC13C5.01c 4.1 2.6
 4.4
 0.5
 0.1
 0.8
 1.5
 0.6
 3.7
 0.3
 0.1
 2.7
 1.8
22 pup2 putative proteasome core particle subunit alpha 5 Pup2 2543205 SPAC323.02c 4.1 2.5
 4.5
 0.2
 0.2
 3.2
 1.7
 -1.7
 0.8
 5.3
 1.5
 1.8
 -1.9
23 uap56 ATP-dependent RNA helicase Uap56 2542433 SPAC17G6.14c 4.1 3.0
 3.7
1.1
 1.8
-0.3
 1.0
1.0
 2.4
1.0
 1.9
1.6
 2.2
 2.8
 4.5
0.9
 1.8
0.7
24 SPBC13G1.02 putative mannose-1-phosphate guanyltransferase 2539751 SPBC13G1.02 4.0 2.4
 4.6
 3.0
 2.9
 1.5
 1.8
 -0.1
 1.3
 2.1
 1.5
 2.5
 0.9
25 spo20 sec14 cytosolic factor family Sec14 2543628 SPAC3H8.10 4.0 2.8
 3.9
0.9
0.8
 0.8
0.5
 0.8
0.4
 -0.1
-0.2
 0.7
0.0
 -1.3
 -0.9
 0.3
-0.1
 1.0
0.5
26 pam1 20S proteasome component beta 6 2542062 SPAC22F8.06 4.0 2.5
 4.3
 -0.3
 -0.0
 -0.6
 0.9
 -1.3
 -0.7
 0.0
 1.4
 0.7
 -1.2
27 pop3 WD repeat protein Pop3 2540645 SPBC21B10.05c 3.9 3.3
 2.8

-0.6
 -0.2
 -0.2
 0.3
 1.0
 1.4
 -0.7
 -0.3
28 SPAC31A2.04c putative proteasome core particle subunit beta 4 2543122 SPAC31A2.04c 3.9 2.2
 4.8
0.1
-0.9
 -0.4
 -1.1
 -1.9
 0.4
-0.2
 -0.7
-0.9
 -0.9
29 rpt4 putative proteasome regulatory subunit Rpt4 2539189 SPCC1682.16 3.8 3.3
 2.6
-0.2
-1.3
 -0.7
-1.0
 0.1
-1.8
 -0.4
-0.7
 -1.0
-1.5

0.4
-0.9
 -0.2
-1.0
30 erg9 putative squalene synthase Erg9 2541110 SPBC646.05c 3.7 3.1
 2.7
2.4
 3.0
 1.5
 1.3
 2.6
-0.0
 -3.2
1.5
 1.7
31 apm1 AP-1 adaptor complex mu subunit Apm1 2541306 SPBP16F5.07 3.7 3.2
 2.6
2.7
0.7
 0.3
-0.1
 -0.3
-0.5
 3.0
1.5
 0.0
-0.6
 0.4
0.1
 -1.2
 0.2
-0.1
 1.6
1.1
32 rpn2 putative proteasome regulatory subunit Rpn2 2540191 SPBC17D11.07c 3.7 3.4
 2.2
 -1.3
 -1.6
 -0.8
 0.2
 -2.3
 -2.2
 -1.3
 0.3
 -0.6
 -0.8
33 rpn7 19S proteasome regulatory subunit Rpn7 2540794 SPBC582.07c 3.6 3.4
 2.0
 0.3
 -1.2
 3.8
 1.1
 -1.1
 3.5
 0.4
 2.7
 0.3
 -0.1
34 vps5 retromer complex subunit Vps5 2539552 SPCPJ732.01 3.6 2.0
 4.6
 -0.6
 1.2
-1.1
 0.6
0.4
 0.3
-1.1
 -0.2
-1.5
 -0.3
-0.5
 1.0
 -0.7
 0.4
-0.1
 -0.3
-0.3
35 SPAC824.09c putative GTPase-activating protein 2542671 SPAC824.09c 3.6 2.8
 3.1
 -0.4
 -0.6
 -0.5
-1.4
 -0.4
 0.2
 0.2
 -1.0
 0.4
-0.8
36 npl4 putative Cdc48-Npl4-Ufd1 complex subunit Npl4 2539821 SPBC1711.10c 3.6 3.0
 2.6
0.5
 -0.5
 -0.1
 -0.2
 -0.2
 0.0
-0.4
 -0.4
 0.2
 1.7
37 sec27 putative coatomer beta' subunit protein 2540050 SPBC16C6.13c 3.6 2.4
 3.7
 -1.2
 1.5
 1.5
 1.1
 1.5
 -0.6
 -1.8
 0.4
 2.1
 0.4
38 SPCC1620.08 putative succinate-CoA ligase alpha subunit 2539168 SPCC1620.08 3.6 2.7
 3.1
 0.4
 2.2
-1.2
 0.8
0.6
 1.8
1.3
 2.2
2.1
 2.7
2.2
 1.7
 -0.9
 3.0
2.0
 1.4
0.5
39 txl1 thioredoxin-1-like protein Txl1 2541028 SPBC577.08c 3.6 2.7
 3.1





1.6
1.4


40 glo3 putative ARF GTPase-activating protein 2541825 SPAC22E12.17c 3.6 3.3
 2.1
 -1.3
 -0.7
-1.6
 -0.4
-1.3
 -0.0
-0.9
 0.3
 1.6
1.1
 -1.3
 3.6
 -0.3
-1.7
 -0.8
-1.7
41 pts1 20S proteasome component beta 5 2543623 SPAC4A8.13c 3.5 3.3
 2.0
 -0.6
-1.0
 -0.7
-2.1
 0.4
-0.4
 -1.1
-1.1
 -0.5
-1.4
 -0.4
-0.9
 -1.6
 0.2
 -0.6
-1.6
 0.7
-1.4
42 pre3 putative proteasome core particle subunit beta 1 Pre3 2540878 SPBC4C3.10c 3.5 3.0
 2.5
 -0.8
-0.1
 1.2
 1.5
 3.0
-0.4
 0.1
 2.3
 0.2
 1.3
43 amk2 AMP-activated protein kinase beta subunit Amk2 2539130 SPCC1919.03c 3.5 3.6
 1.3
 1.5
 0.8
-1.5
 0.1
-0.6
 -0.5
-0.8
 1.2
-1.7
 3.1
1.3
 0.2
0.1
 1.0
0.8
 1.3
1.3
 0.5
-1.1
44 pom34 nucleoporin Pom34 2543270 SPAC1002.02 3.5 2.6
 3.1









45 tif452 translation initiation factor eIF4E 4F complex subunit 2539870 SPBC1709.18 3.5 1.9
 4.4
 1.1
0.8
 -0.5
-1.0
 0.3
0.3
 1.4
-0.5
 0.8
-0.3
 3.3
0.9
 2.5
-0.1
-0.5
 -0.4
-1.2
46 tcg1 single-stranded telomeric-binding protein Tgc1 2541062 SPBC660.11 3.5 2.6
 3.1









47 mts4 19S proteasome regulatory subunit Mts4 2541268 SPBP19A11.03c 3.4 3.0
 2.4
 1.7
 -1.0
 0.2
 2.2
 -2.0
 0.6
 2.4
 3.6
 1.9
 -0.1
48 ste13 ATP-dependent RNA helicase Ste13 2541216 SPBC776.09 3.4 3.1
 2.1
-0.6
-1.2
 -0.8
 -1.0
 0.2
 -0.7
 -0.2
 -0.2
-0.7
 -1.8
 -1.8
49 SPCC1906.02c putative CUE domain-containing protein Cue3 2538764 SPCC1906.02c 3.4 2.3
 3.3
 -0.7








50 ptr3 ubiquitin-activating enzyme E1 2540744 SPBC1604.21c 3.4 2.7
 2.7
 0.3
-0.2
 1.0
0.5
 1.7
0.6
 0.3
-0.2
 3.3
1.0
 -0.5
-1.6
 0.7
 0.9
0.7
 0.0
-0.5
 -0.2
-0.2
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