Orthologous genes in OrthoFinder**

Species Gene Description
 gga-m.5   LMX1B   LIM homeobox transcription factor 1 beta 
 gga-u.3   LMX1B   LIM homeobox transcription factor 1 beta 
 gga-r.3   LMX1B   LIM homeobox transcription factor 1 beta 
 gga-u.3   LMX1A   LIM homeobox transcription factor 1, alpha 
 gga-u.3   101750514   LIM homeobox transcription factor 1-alpha-like 
 hsa-u.4   LMX1B   LIM homeobox transcription factor 1 beta 
 mmu-u.4   Lmx1b   LIM homeobox transcription factor 1 beta 
 rno-u.3   Lmx1a   LIM homeobox transcription factor 1 alpha 
 cfa-u.3   LMX1B   LIM homeobox transcription factor 1 beta 
 dre-u.3   lmx1ba   LIM homeobox transcription factor 1, beta a 
 dre-u.3   lmx1al   LIM homeobox transcription factor 1, alpha-like 
 dre-u.3   lmx1bb   LIM homeobox transcription factor 1, beta b 
 dme-u.3   CG4328   uncharacterized protein 
 dme-u.3   Lmx1a   LIM homeobox transcription factor 1 alpha 
 cel-u.3   lim-6   LIM domain family 
 spo-u.3   SPBC3H7.03c   alpha-ketoglutarate dehydrogenase 

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Top 50 coexpressed genes to LMX1B (gga-m.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 gga62   Fatty acid elongation  1 25 -
 gga71   Fatty acid degradation  1 34 -
 gga250   Alanine, aspartate and glutamate metabolism  1 34 -
 gga280   Valine, leucine and isoleucine degradation  1 44 -
 gga240   Pyrimidine metabolism  1 59 -

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gga:LMX1B (LIM homeobox transcription factor 1 beta) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

gga-m.5
for
LMX1B
gga-u.3
for
LMX1B
gga-r.3
for
LMX1B
gga-u.3
for
LMX1A
gga-u.3
for
101750514
hsa-u.4
for
LMX1B
mmu-u.4
for
Lmx1b
rno-u.3
for
Lmx1a
cfa-u.3
for
LMX1B
dre-u.3
for
lmx1ba
dre-u.3
for
lmx1al
dre-u.3
for
lmx1bb
dme-u.3
for
CG4328
dme-u.3
for
Lmx1a
cel-u.3
for
lim-6
spo-u.3
for
SPBC3H7.03c
1 ALC ALC protein 395084 2.2














2 NSMAF neutral sphingomyelinase activation associated factor 421137 2.2 3.1
 0.8
 -0.2
 0.8
 -0.2
 -0.6
 -0.5
 -1.0
 0.6
 -0.2
 -0.7



3 HOXA11 homeobox A11 395327 2.0 2.8
 0.6
 1.4
 0.9
 1.1
 3.5
 -0.2
 -0.1
 2.8
 0.6
 1.3



4 HOXA13 homeobox A13 373934 1.9 2.8
 0.7
 0.9
 -0.8
 3.3

1.5
 2.6
2.3
 0.2
-0.2
 1.6
-0.3



5 HOXA3 homeobox A3 395231 1.9 2.2
 0.1
 0.3
 -0.1
 2.3
 2.1
 0.1
 1.6
 2.4
 -0.8
 3.2



6 LOC419389 uncharacterized LOC419389 419389 1.9 2.4
 0.4












7 HOXD4 homeobox D4 424139 1.9 2.9
 0.9
 2.6
1.3
 1.7
0.9
 2.0
2.0
 3.7
2.8
 1.1
0.1
 1.3
0.9
 2.9
2.0
 2.5
0.5
 4.4
3.7
 2.6
 2.0
 1.9
8 PAX2 paired box 2 395574 1.9 2.3
 0.3
 0.3
-0.3
 1.5
1.3
 0.9
 4.6
1.5
 -0.2
 1.1
0.4
 1.9
0.7
 2.4
1.3
 4.0
3.0

0.1
9 IRX1 iroquois homeobox 1 374185 1.9 2.8
 0.7
 1.2
 1.2
 3.7
 5.3
 -0.2
 1.6
 0.2
 -1.1
 3.4



10 HOXD11 homeobox D11 395328 1.8 3.5
 1.4
 0.6
 1.3
 2.5
 4.2

3.3
2.7
 -0.2
-0.7
 2.2
0.4



11 DECR1 2,4-dienoyl-CoA reductase 1, mitochondrial 420218 1.8 1.9
 -0.0
 -0.1
 -1.3
 -0.5
 -0.2
 -1.0
 -0.3
 -1.5
 -1.4
 -0.5

0.1
-0.1
12 ECHDC3 enoyl-CoA hydratase domain containing 3 419098 1.8 1.9
 0.1
 -1.0
 0.3
 0.3
 -0.1
 0.5
 0.1
 -0.6
 -0.1
 2.1
 -0.4
 -0.9
 -0.6
13 HOXA6 homeobox A6 420630 1.8 1.9
 -0.0
 0.5
-1.3
 1.3
0.0
 2.3
1.3
 2.3
1.2
 -1.0
 0.1
0.1
 2.5
1.1
 2.0
1.0
 4.5
3.3


1.0
14 ALDH4A1 aldehyde dehydrogenase 4 family member A1 419467 1.8 1.9
 0.1
 -0.7
 -0.3
 -0.8
 -0.3
 -0.9
 0.1
 -0.7
 0.2
 -0.2
 0.5
 0.5
 -0.4
15 FZD2 frizzled class receptor 2 374061 1.8 2.0
 0.1
 0.3
-0.7
 0.5
0.3
 1.7
1.3
 2.3
1.6
 1.3
0.3
 2.1
1.7
 0.1
-0.2
 0.4
-0.6
 -0.2
-0.4
 -0.6
 0.1
 -0.5
 0.8
16 CNTLN centlein, centrosomal protein 769413 1.8 1.7
 -0.1
 -0.7
 1.3

0.5
 0.2
 0.2
 0.7
 0.8



17 ARHGAP18 Rho GTPase activating protein 18 421706 1.7 2.5
 0.6
 0.2
-0.1
 1.2
0.1
 1.0
0.3
 0.4
-0.4
 0.9
-0.2
 0.1
-0.0
 0.5
0.2
 3.0
0.4
 1.2
0.4
 0.1
 -0.8

18 ARHGAP42 Rho GTPase activating protein 42 418990 1.7 1.8
 0.0
 0.5
 -0.4
 -0.0
 0.8
 0.6
 -0.8
 0.6
-1.0
 1.5
-1.1
 0.8
-0.8



19 GPC3 glypican 3 770863 1.7 2.7
 0.8
 0.3
-0.6
 1.9
1.6
 1.1
-0.1
 1.5
0.4
 -0.4
-1.0
 -1.4
 2.3
1.3
 2.7
1.3
 1.1
0.8
 -1.5
 0.3
 1.1
 -0.3
20 OPNVA vertebrate ancient opsin 423974 1.7














21 LOC769329 ankyrin repeat domain-containing protein 40-like 769329 1.7 1.9
 0.1
 0.3
0.0
 0.7
-1.0
 0.2
 -0.0
 0.5
 0.7
 0.8
 -0.4
 -0.5

0.6
 -0.0
-1.8
22 ALDH1A2 aldehyde dehydrogenase 1 family member A2 395844 1.7 1.7
 -0.1
 1.1
-0.3
 0.8
0.6
 0.9
0.6
 1.2
1.0
 0.0
0.0
 3.1
-0.2
 0.5
0.3
 1.1
-0.0
 2.1
0.5
 -0.0
-1.7
 -0.8
-1.2
 -0.6
23 TBX4 T-box 4 373989 1.7 1.7
 -0.1
 0.4
 -1.7
1.9
 -0.2
2.0
 0.3
 2.2



24 DPYD dihydropyrimidine dehydrogenase 429083 1.7 2.1
 0.3
 -0.4
 -1.1
 -1.6
 -0.4
 0.2
 -1.2
 0.0
-0.6
 -0.1
-0.1
 0.4
-0.3
 0.4
 0.8
 -0.1
25 HOXA4 homeobox A4 395307 1.7 1.6
 -0.1
 2.6
1.3
 1.7
0.9
 2.0
2.0
 3.7
2.8
 1.1
0.1
 1.3
0.9
 2.9
2.0
 2.5
0.5
 4.4
3.7
 2.6
 2.0
 1.9
26 GBE eye-globin 417972 1.6














27 RHOT2 ras homolog family member T2 427651 1.6 1.2
 -0.4
 -0.3
-1.0
 -0.3
-1.5
 0.1
-0.6
 -0.8
-1.0
 -0.3
-0.5
 -0.8
-1.3
 -0.2
-0.6
 0.8
-0.9
 1.4
-0.0
 0.9
 0.3
 -0.5
28 HOXA2 homeobox A2 396055 1.6 2.3
 0.6
 0.9
0.1
 1.4
0.8
 1.0
0.6
 2.0
1.3
 0.6
 -0.3
 2.6
1.7
 0.3
-0.7
 3.4
2.5
 3.2
 1.9

29 SKIDA1 SKI/DACH domain containing 1 420510 1.6 1.1
 -0.6
 -0.3
 1.0
 1.6
 1.1
 0.3
1.0
 -1.1
 1.9



30 PDK3 pyruvate dehydrogenase kinase 3 418595 1.6 1.9
 0.2
 0.6
0.4
 -0.1
-0.2
 0.8
-0.3
 0.5
-0.7
 1.1
0.0
 0.6
0.2
 1.5
1.4
 1.1
0.8
 0.4
-0.3
 -0.3
 0.1
 -1.3
31 PAX5 paired box 5 387330 1.6 2.1
 0.4
 0.3
-0.3
 1.5
1.3
 0.9
 4.6
1.5
 -0.2
 1.1
0.4
 1.9
0.7
 2.4
1.3
 4.0
3.0

0.1
32 HPS1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 429879 1.6 2.0
 0.3
 -0.1
 0.5
 -0.2
 0.1
 -0.2
 -0.8
 -0.4
 -0.6
 0.2
 0.8
 2.4

33 ABCC3 ATP binding cassette subfamily C member 3 422099 1.6 2.7
 0.9
 0.8
0.4
 0.0
-0.1
 0.7
0.2
 0.6
0.4
 0.2
-0.1
 1.0
0.7
 2.2
1.3
 1.0
0.6
 0.5
0.1
 1.3
0.6
 1.4
0.3
 0.7
0.6
34 CTNS cystinosin, lysosomal cystine transporter 417606 1.6 1.7
 0.1
 0.1
 -0.9
 -0.4
 0.7
 -1.0
 0.4
 -0.3
 0.0
 0.1
 0.2
 -0.2
 -0.1
 -0.8
35 HOXA1 homeobox A1 374051 1.6 2.1
 0.4
 1.1
0.0
 0.8
0.7
 2.3
2.2
 1.4

1.5
 1.4
 3.9
 1.7
 1.7
 0.8
36 WNK2 WNK lysine deficient protein kinase 2 415984 1.6 1.6
 -0.1
 -0.8
 -0.1
 2.7
 2.1
 0.0
 2.4






37 CEP57L1 centrosomal protein 57kDa-like 1 771146 1.6














38 OVALX ovalbumin-related protein X (SERPINB14C) 420898 1.5 1.3
 -0.2
 0.4
-0.2
 1.1
0.8
 -0.3
-0.3
 1.3
0.2
 2.1
 -0.3
-0.6
 1.3
0.5
 -0.1
-0.1
 -0.2
-0.3
 1.2
0.4
 1.5
0.4
 1.8
0.7
39 CSF2 colony stimulating factor 2 416325 1.5














40 HOXC9 homeobox C9 425723 1.5 2.3
 0.6
 0.9
0.7
 1.5
0.9
 4.8
2.8
 4.5
2.7
 0.4
-0.0
 1.0
0.7
 2.0
1.9
 0.3
0.0
 3.2
3.1
 -0.2
 1.5
 0.4
41 PITX1 paired like homeodomain 1 374201 1.5 2.1
 0.5
 2.3
1.9
 1.3
0.1
 3.4
2.8
 4.8
2.2
 2.2
1.8
 1.8
-0.6
 4.0
2.5
 1.4
0.5
 6.6
2.1
 2.6
 4.5
 2.0
42 HADH hydroxyacyl-CoA dehydrogenase 420290 1.5 0.9
 -0.7
 -1.1
 -0.6
 -0.9
 0.1
 -1.2
 0.1
 -0.7
 -1.0
 -0.0

0.1
-1.3
43 LTK leukocyte receptor tyrosine kinase 423216 1.5 2.7
 1.0
 1.9
 0.8
 0.2
 0.8
 0.2
-1.0
 0.4
 0.6
-0.0
 1.6
-0.0
 0.2
-1.7
 0.4
 0.5
 0.3
44 DPP10 dipeptidyl peptidase like 10 424280 1.5 2.6
 1.0
 1.2
0.8
 0.5
0.1
 -0.1
-0.7
 0.6
0.3
 1.6
0.6
 -0.2
-0.6
 0.7
0.0
 0.8
0.6
 -0.2
-0.3
 1.3
0.3
 0.5
0.5
 2.3
0.2
 0.5
45 COL14A1 collagen type XIV alpha 1 chain 396276 1.5 1.8
 0.2
 0.4
 0.6
 -0.5
 -0.0
 2.1
 0.3
 1.2
 0.4
 0.5



46 ALX1 ALX homeobox 1 427871 1.5 1.7
 0.2
 0.4
 1.6
 -0.0

-0.5
 1.4
 0.1
 3.8



47 COG6 component of oligomeric golgi complex 6 418888 1.5 1.9
 0.3
 0.6
 -0.6
 -0.3
 -0.9
 -0.4
 -0.2
 0.5
 -0.9
 0.3
 0.1
 0.5
 -0.6
 0.8
48 SIX3 SIX homeobox 3 378786 1.5 1.6
 0.0
 -0.1
-1.1
 -0.2
-0.3
 3.8
1.9
 4.4
 1.2
1.6
1.4
 0.7
0.4
 1.9
1.2
 1.4
 2.0
 1.2
 -0.4
49 EMX2 empty spiracles homeobox 2 423923 1.5 2.3
 0.7
 1.5
0.3
 1.5
0.4
 3.1
 3.2
1.0
 0.9
0.7
 2.1
 2.1
0.8
 0.8
0.5
 2.3
1.6
 0.7
0.1
 1.2
1.0
 0.6
50 MSX2 msh homeobox 2 395245 1.4 2.5
 1.0
 2.2
1.2
 0.2
-1.2
 4.1
3.0
 5.2
3.6
 4.1
1.8
 2.3
0.3
 3.1
2.6
 0.4
0.1
 3.1
2.7
 1.4
 1.0
 1.0
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