Orthologous genes in OrthoFinder**

Species Gene Description
 mcc-u.3   LIN28A   lin-28 homolog A 
 mcc-r.3   LIN28A   lin-28 homolog A 
 mcc-u.3   LIN28B   lin-28 homolog B 
 hsa-u.4   LIN28A   lin-28 homolog A 
 hsa-u.4   LIN28B   lin-28 homolog B 
 mmu-u.4   Lin28b   lin-28 homolog B 
 mmu-u.4   Lin28a   lin-28 homolog A 
 rno-u.3   Lin28b   lin-28 homolog B 
 gga-u.3   LIN28B   lin-28 homolog B 
 gga-u.3   LIN28A   lin-28 homolog A 
 dre-u.3   lin28aa   lin-28 homolog Aa 
 dre-u.3   lin28b   lin-28 homolog B (C. elegans) 
 dre-u.3   lin28ab   lin-28 homolog Ab 
 dme-u.3   lin-28   lin-28 
 cel-u.3   lin-28   Protein lin-28 

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Top 50 coexpressed genes to LIN28A (mcc-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 mcc350   Tyrosine metabolism  1 39 -
 mcc71   Fatty acid degradation  1 44 -
 mcc620   Pyruvate metabolism  1 52 -
 mcc10   Glycolysis / Gluconeogenesis  1 80 -
 mcc4530   Tight junction  2 171 -

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mcc:LIN28A (lin-28 homolog A) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

mcc-u.3
for
LIN28A
mcc-r.3
for
LIN28A
mcc-u.3
for
LIN28B
hsa-u.4
for
LIN28A
hsa-u.4
for
LIN28B
mmu-u.4
for
Lin28b
mmu-u.4
for
Lin28a
rno-u.3
for
Lin28b
gga-u.3
for
LIN28B
gga-u.3
for
LIN28A
dre-u.3
for
lin28aa
dre-u.3
for
lin28b
dre-u.3
for
lin28ab
dme-u.3
for
lin-28
cel-u.3
for
lin-28
1 BOD1L2 biorientation of chromosomes in cell division 1 like 2 695409 4.8 2.5
 3.2
1.3
 1.0
 0.4
 -0.2
 -0.8
 0.3
 0.4
 1.1
 -0.2
-1.7
 0.7
0.4
 -1.2
-1.6
 0.3
2 ZIC5 Zic family member 5 705141 3.9 2.1
 4.8
2.1
 4.7
2.4
 3.7
3.0
 4.4
3.6
 3.6
2.5
 2.0
0.6
 0.9
0.5
 2.8
2.1
 3.6
1.5
 0.2
0.2
 2.0
1.1
 -0.5
 0.3
3 LOC114673696 proline-rich protein 36-like 114673696 3.8 2.0












4 LOC100429936 mucin-3A-like 100429936 3.6 1.9
 3.4
1.8
 1.6
1.5
 0.7
0.5
 1.0
-0.1
 0.9
0.8
1.0
0.3
 1.1
-0.8
 1.8
 0.3
 0.2

5 LOC114676452 uncharacterized LOC114676452 114676452 3.6 1.9












6 CLDN6 claudin 6 699854 3.5 1.9
 3.0
 5.7
 3.5
 1.2
 3.8
 -0.2






7 LOC696244 acyl-coenzyme A synthetase ACSM2B, mitochondrial 696244 3.3 1.8
 0.5

0.8
 0.0
 -0.3






8 C20H16orf82 chromosome 20 C16orf82 homolog 702965 3.3 1.8
 0.5

0.1
 1.2
 0.2






9 UNC13A unc-13 homolog A 720000 3.3 1.8
 1.6
1.3
 1.9
0.3
 1.8
1.3
 1.7
1.2
 -0.4
-0.5
 1.3
1.0
 1.3
0.4
 -0.0
-0.2
 0.7
0.5
 1.7
1.2
 0.2
-0.2
 0.1
 0.5
10 LOC114670868 uncharacterized LOC114670868 114670868 3.3 1.8












11 LOC114675906 uncharacterized LOC114675906 114675906 3.3 1.8












12 LOC114677524 serine/arginine repetitive matrix protein 1-like 114677524 3.3 1.7












13 VENTX VENT homeobox 701963 3.1 1.7
 1.8
 0.4
 0.6


1.3
 0.8
 1.3
0.6
 0.0
-1.8
 1.7
0.7
0.6
14 ZNF589 zinc finger protein 589 710081 3.1 1.7
 0.5
 1.6
 0.7









15 CECR2 CECR2 histone acetyl-lysine reader 718454 3.1 1.6
 -0.1

1.6
 4.2
 0.9
 1.3
 2.5
 2.6
 2.1
 2.5
 0.2
16 MIXL1 Mix paired-like homeobox 699179 3.0 1.6
 0.7
 0.8
 1.4
 0.8
 2.2


1.5
 -0.8
 0.2

17 LOC114679436 uncharacterized LOC114679436 114679436 3.0 1.6












18 RPGRIP1 RPGR interacting protein 1 707961 3.0 1.6
 1.2
0.2
 0.5
 1.1
 0.1
 0.0
 0.4
0.3
 0.9
 -0.0
 -0.8
-0.8
 3.0
0.2
 -0.5
-0.9

19 ZYG11A zyg-11 family member A, cell cycle regulator 713726 3.0 1.6
 1.6
-1.2
 -0.3
 -0.3
 0.7
-1.1
 0.7
-0.2
 1.2
 -2.0
 -2.8
 -0.3
-0.5
 0.0
-1.5
 -0.2
-1.8
1.7
20 TET1 tet methylcytosine dioxygenase 1 693707 3.0 1.6
 1.6
 1.7
 2.5
 -0.4
 1.0
 -0.3
 0.1
 0.5
 -0.5
 3.0
 0.5

21 HAP1 huntingtin associated protein 1 704707 2.9 1.6
 0.4
 0.3
 -0.2
 -0.1
 -1.0
 -0.2






22 LOC114680291 uncharacterized LOC114680291 114680291 2.9 1.6












23 SLC12A1 solute carrier family 12 member 1 714289 2.9 1.6
 3.2
-0.9
 0.5
-0.9
 0.7
-1.4
 1.2
-0.2
 0.2
-1.2
 0.3
0.1
 1.9
-1.6
 1.1
-1.2
 0.3
-0.2
 0.9
0.8
 0.5
-0.8
 0.0
-0.7
24 LOC106996841 uncharacterized LOC106996841 106996841 2.9 1.6












25 LIN28B lin-28 homolog B 696130 2.9 1.6
 2.9
 6.1
 6.1
 4.6
 4.6
3.1
 3.1
 7.7
2.5
 3.4
2.5
 7.7
3.4

26 NLRP7 NLR family pyrin domain containing 7 697398 2.9 1.6
 2.6
1.5
 2.8
1.6
 1.6
1.3
 4.1
3.4
 4.5
3.1
 -0.4
-0.6
 0.6
 0.6
 0.9
0.9
 1.3
0.6
 1.0
0.5
 0.3
27 ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide 707682 2.9 1.6
 1.9
1.4
 1.1
0.8
 0.9
0.8
 0.3
-0.2
 0.0
-0.1
 -0.5
-0.9
 0.3
0.1
 -0.9
-1.2
 0.4
 -0.4
 -2.1
 -1.4
 -0.6
28 NANOG Nanog homeobox 715746 2.9 1.5
 0.3
 3.6
 1.1
 1.6
 1.9
3.3
 1.9



0.4
29 MAGEB1 MAGE family member B1 703810 EGK_20355 2.8 1.5
 3.7
-0.2
 0.8
-0.4
 4.6
-0.0
 3.0
2.6
 4.5
2.0
 0.9
-0.3
 -0.5
 -0.9
 -1.0
 -0.6
 -0.8
 -1.5
30 LOC114671012 uncharacterized LOC114671012 114671012 2.8 1.5












31 LOC106997991 translation initiation factor IF-2-like 106997991 2.8 1.5












32 ZNRF3 zinc and ring finger 3 714156 2.8 1.5
 -0.8
 -0.5
 0.9
 -0.3
 -0.8
 0.5
 0.5
 0.2
 0.3
 0.2
 1.8

33 DPPA4 developmental pluripotency associated 4 706631 2.8 1.5
 2.5
 5.2
 4.4
 2.4
 4.8







34 ZNF296 zinc finger protein 296 713620 2.8 1.5
 1.1
 0.2
 -0.1
 -0.9
 0.9


-0.3
 -0.5
 -0.7
 1.3
0.6
 0.5
-0.0
35 LOC106996842 uncharacterized LOC106996842 106996842 2.8 1.5












36 LOC114674876 histidine-rich glycoprotein-like 114674876 2.8 1.5












37 GLIPR1L1 GLIPR1 like 1 718901 2.8 1.5
 2.0
1.7
 0.7
0.2
 1.6
1.6
 0.6
-0.6
 2.3
0.3
 0.6
-0.4
 1.3
0.8
 0.8
0.6
 0.0
-0.1
 0.1
0.1
 0.7
0.3
1.7
38 LOC114675364 POU domain, class 5, transcription factor 1 pseudogene 114675364 2.8 1.5












39 LOC114680150 uncharacterized LOC114680150 114680150 2.7 1.5












40 GLB1L3 galactosidase beta 1 like 3 721402 2.7 1.5
 2.0
0.8
 0.2
 -1.1
 -0.3
 0.9
 -0.8
 1.0
 -0.4
 0.3
-0.7
 0.1
-0.7
 0.3
-0.2

41 USH2A usherin 708278 2.7 1.5
 3.4



0.8
 0.0
 0.9
 -0.6
 0.8
 -0.7

42 VSIG10L V-set and immunoglobulin domain containing 10 like 719898 2.7 1.5
 1.4
 1.7
 0.7
 -0.3
 0.7
 -0.7






43 SYNDIG1L synapse differentiation inducing 1 like 699046 EGK_18375 2.7 1.5
 4.0

1.2
 1.2
 1.7
 0.8
 -0.1
 -1.1
 -0.9
 -1.1

44 LOC106997580 mucin-17-like 106997580 2.7 1.4












45 MAP3K1 mitogen-activated protein kinase kinase kinase 1 710979 2.6 1.4
 0.6
 0.7
 -0.1
 -0.2
 0.5
 1.1
 -0.5
 -1.1
 -0.1
 -0.9
 0.1

46 LOC107000818 histone H4 107000818 2.6 1.4
 1.3
0.6
 1.0
0.7
 0.5
0.5
 0.4
0.3
 1.2
0.9
 0.0
-0.4
 0.3
-1.1
 -0.1
-0.5
 1.9
1.5
 1.4
1.1
 0.8
0.7
 0.8
 0.8
0.5
47 SLC10A2 solute carrier family 10 member 2 702376 2.6 1.4
 1.8
0.3
 2.7
1.3
 0.2
0.1
 2.3
0.2
 0.1
-0.1
 0.7
-0.3
 -0.1
 -0.3
 1.3
 -0.3
 0.8
 1.0
48 EGR4 early growth response 4 714407 2.6 1.4
 2.4

0.7
 0.1
 1.2
 0.3
 1.3




49 LOC114670950 endogenous retrovirus group K member 25 Env polyprotein-like 114670950 2.6 1.4
 0.8
0.8
 2.4
 0.6









50 SERPINA4 serpin family A member 4 701846













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