Orthologous genes in OrthoFinder**

Species Gene Description
 mcc-u.3   MAMU-DPB   major histocompatibility complex, class II, DP beta 
 mcc-r.3   MAMU-DPB   major histocompatibility complex, class II, DP beta 
 mcc-m.4   MAMU-DPB   major histocompatibility complex, class II, DP beta 
 mcc-u.3   114675357   HLA class II histocompatibility antigen, DP beta 1 chain-like 
 mcc-u.3   100429241   HLA class II histocompatibility antigen, DQ beta 1 chain-like 
 hsa-u.4   HLA-DRB4   major histocompatibility complex, class II, DR beta 4 
 hsa-u.4   HLA-DRB5   major histocompatibility complex, class II, DR beta 5 
 mmu-u.4   H2-Eb2   histocompatibility 2, class II antigen E beta2 
 mmu-u.4   H2-Eb1   histocompatibility 2, class II antigen E beta 
 mmu-u.4   H2-Ab1   histocompatibility 2, class II antigen A, beta 1 
 rno-u.3   688090   similar to RT1 class II histocompatibility antigen, B-1 beta chain precursor (RT1.B-beta(1)) 
 cfa-u.3   100856137   HLA class II histocompatibility antigen, DQ beta 2 chain 
 cfa-u.3   DLA-DQB1   major histocompatibility complex, class II, DQ beta 1 
 spo-u.3   SPAC186.08c   putative L-lactate dehydrogenase 

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Top 50 coexpressed genes to MAMU-DPB (mcc-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 mcc4612   Antigen processing and presentation  14 70 7.16
 mcc4514   Cell adhesion molecules  13 135 6.77
 mcc5152   Tuberculosis  13 152 6.42
 mcc5168   Herpes simplex virus 1 infection  13 465 6.91
 mcc5416   Viral myocarditis  12 68 7.24

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mcc:MAMU-DPB (major histocompatibility complex, class II, DP beta) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

mcc-u.3
for
MAMU-DPB
mcc-r.3
for
MAMU-DPB
mcc-m.4
for
MAMU-DPB
mcc-u.3
for
114675357
mcc-u.3
for
100429241
hsa-u.4
for
HLA-DRB4
hsa-u.4
for
HLA-DRB5
mmu-u.4
for
H2-Eb2
mmu-u.4
for
H2-Eb1
mmu-u.4
for
H2-Ab1
rno-u.3
for
688090
cfa-u.3
for
100856137
cfa-u.3
for
DLA-DQB1
spo-u.3
for
SPAC186.08c
1 MAMU-DRA major histocompatibility complex, class II, DR alpha 100187587 EGK_14758 11.2 4.4
 7.4
 23.1
10.6
 8.6
4.3
 26.8
5.0
 19.1
11.4
 6.8
5.5
 31.0
6.4
 30.0
7.7
 9.1
4.0
 9.5
9.1
 21.1
19.9
2 MAMU-DMA major histocompatibility complex, class II, DM alpha 717870 10.3 4.1
 6.8
 11.2
 6.7
 4.1
 3.9
 4.1
 14.5
 17.1
 3.3
 8.0
 15.6
3 CD74 CD74 molecule 710820 10.1 4.6
 5.9
 9.4
 7.0
 4.3
 7.6
 4.1
 28.0
 27.9
 8.0
 8.1
 17.4
4 MAMU-DPA major histocompatibility complex, class II, DP alpha 717992 8.8 1.4
 8.6
 23.1
10.6
 8.6
4.3
 26.8
5.0
 19.1
11.4
 6.8
5.5
 31.0
6.4
 30.0
7.7
 9.1
4.0
 9.5
9.1
 21.1
19.9
5 MAMU-DQA1 major histocompatibility complex, class II, DQ alpha 1 720582 7.8 2.3
 6.2
 23.1
10.6
 8.6
4.3
 26.8
5.0
 19.1
11.4
 6.8
5.5
 31.0
6.4
 30.0
7.7
 9.1
4.0
 9.5
9.1
 21.1
19.9
6 MAMU-DMB major histocompatibility complex, class II, DM beta 100429857 6.1 3.2
8.8
 5.3
 4.4
 6.4
 8.2
4.5
 19.5
12.0
 20.9
11.9
 2.1
 8.2
 16.5
7 MAMU-DQB1 major histocompatibility complex, class II, DQ beta 1 716823 5.5 2.6
 3.1
 5.9
5.3
 5.8
4.7
 4.2
2.4
 19.8
8.9
 7.8
5.5
 29.1
6.5
 29.1
7.3
 10.5
0.8
 8.8
7.0
 20.9
7.0
8 MAMU-DOA major histocompatibility complex, class II, DO alpha 717947 EGK_21541 4.7 2.1
 2.9
 23.1
10.6
 8.6
4.3
 26.8
5.0
 19.1
11.4
 6.8
5.5
 31.0
6.4
 30.0
7.7
 9.1
4.0
 9.5
9.1
 21.1
19.9
9 LOC100429241 HLA class II histocompatibility antigen, DQ beta 1 chain-like 100429241 4.7 2.5
5.9
5.3
 5.8
4.7
 4.2
2.4
 19.8
8.9
 7.8
5.5
 29.1
6.5
 29.1
7.3
 10.5
0.8
 8.8
7.0
 20.9
7.0
10 MAMU-F major histocompatibility complex, class I, F 709076 4.6 3.1
 1.4
 2.3
2.2
 3.4
3.3
 1.0
0.8
 3.9
3.4
 5.3
2.9
 5.5
5.5
 7.5
7.3
 10.6
9.4
 4.6
2.7
 6.9
5.1
11 IL10RA interleukin 10 receptor subunit alpha 704383 4.4 1.5
 3.3
 3.3
 2.2
 0.5
 2.0
 1.9
 3.1
 3.5
 1.7
 1.6
 -0.1
12 CIITA class II major histocompatibility complex transactivator 710761 4.4 3.2
 1.1
 6.6
 5.5
 3.7
 5.4
 8.5
 15.2
 14.7
 6.0
 7.3
 11.0
13 LOC705588 HLA class II histocompatibility antigen, DRB1-4 beta chain-like 705588 4.3 1.8
 2.8
 5.9
5.3
 5.8
4.7
 4.2
2.4
 19.8
8.9
 7.8
5.5
 29.1
6.5
 29.1
7.3
 10.5
0.8
 8.8
7.0
 20.9
7.0
14 CD48 CD48 molecule 719762 4.3 1.9
 2.7
 3.7
 1.6
 0.7
 1.4
 0.5
 2.4
 3.0
 0.9
 1.0
 3.2
15 HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1-like 717623 4.2 2.2
23.1
10.6
 8.6
4.3
 26.8
5.0
 19.1
11.4
 6.8
5.5
 31.0
6.4
 30.0
7.7
 9.1
4.0
 9.5
9.1
 21.1
19.9
16 LOC114669810 HLA class II histocompatibility antigen, DP alpha 1 chain 114669810 4.2 2.2
23.1
10.6
 8.6
4.3
 26.8
5.0
 19.1
11.4
 6.8
5.5
 31.0
6.4
 30.0
7.7
 9.1
4.0
 9.5
9.1
 21.1
19.9
17 LPXN leupaxin 702033 4.1 2.0
 2.3
 3.0
0.8
 2.4
0.4
 0.4
-0.2
 0.3
0.3
 1.4
0.1
 1.8
-0.6
 2.5
-0.4
 1.0
0.1
 0.2
0.1
 2.9
0.2
18 TYROBP transmembrane immune signaling adaptor TYROBP 574207 EGK_10506 3.9 1.1
 3.3
 2.0
 0.1
 1.6
 1.7
 -0.7
 2.3
 2.4
 2.1
 -0.3
 1.8
19 CD86 CD86 molecule 714390 3.8 1.7
 2.4
 1.4
 1.7
 1.0
 2.2
 2.0
 4.2
 3.9
 2.3
 2.1
 2.2
20 LOC106996081 patr class I histocompatibility antigen, A-126 alpha chain-like 106996081 3.8 2.0
2.3
2.2
 3.4
3.3
 1.0
0.8
 3.9
3.4
 5.3
2.9
 5.5
5.5
 7.5
7.3
 10.6
9.4
 4.6
2.7
 6.9
5.1
21 MS4A6A membrane spanning 4-domains A6A 697689 3.8 1.4
 2.7
 3.2
 1.6
 1.1
 1.5
 0.6
-0.1
 1.8
1.2
 1.7
1.2
 1.7
1.7
 0.2
 -0.3
22 HVCN1 hydrogen voltage gated channel 1 709745 3.8 1.2
 2.9
 3.2
 1.7
 1.3
 1.5
 3.0
 2.7
 2.5
 0.6
 2.7
 2.5
23 CPVL carboxypeptidase vitellogenic like 697111 3.7 1.4
 2.6
 4.0
 3.6
 0.8
 1.1






24 IRF8 interferon regulatory factor 8 693933 EGK_13079 3.7 2.0
 1.8
 3.4
 3.2
 0.8
 3.2
 1.3
 3.9
 5.3
 3.3
 3.6
 1.4
25 ABI3 ABI family member 3 698710 EGK_08496 3.5 1.4
 2.5
 2.7
 1.9
 1.1
 1.2
 1.8
 1.0
 1.7
 1.2
 0.5
 0.9
26 IFI30 IFI30 lysosomal thiol reductase 719379 3.5 1.4
 2.3
 2.6
 2.7
 0.9
 2.6
 1.7
 3.8
 4.0
 1.9
 2.6
 3.7
27 LOC114675357 HLA class II histocompatibility antigen, DP beta 1 chain-like 114675357 3.5 1.9
5.9
5.3
 5.8
4.7
 4.2
2.4
 19.8
8.9
 7.8
5.5
 29.1
6.5
 29.1
7.3
 10.5
0.8
 8.8
7.0
 20.9
7.0
28 LY75 lymphocyte antigen 75 699939 3.4 1.3
 2.4
 1.8
 2.6
 0.8
 1.0
 1.2
 1.4
 1.6
 0.4
 0.0
 -0.7
29 LOC705095 T cell receptor gamma constant 2 705095 3.4 1.4
 2.3
 2.3
 1.0
 0.8
 0.6



-0.6
 0.5
30 MAMU-I major histocompatibility complex, class I, I 720372 3.4 1.9
 1.6
 2.3
2.2
 3.4
3.3
 1.0
0.8
 3.9
3.4
 5.3
2.9
 5.5
5.5
 7.5
7.3
 10.6
9.4
 4.6
2.7
 6.9
5.1
31 SCPEP1 serine carboxypeptidase 1 708197 EGK_08560 3.4 1.8
 1.8
 3.6
 3.4
 0.6
 1.0
 1.2
 2.0
 1.9
 0.5
 1.4
 1.4
32 PTPRC protein tyrosine phosphatase receptor type C 712657 3.3 0.8
 3.0
 0.7
 1.1
 0.3
 0.5
 0.2
 2.8
 2.7
 1.4
 0.1
 -0.4
33 LOC114677367 uncharacterized LOC114677367 114677367 3.3 1.8











34 WDFY4 WDFY family member 4 719472 3.3 0.9
 2.8
 2.2
-1.6
 2.4
-0.3
 -0.3
 -0.7
 3.9
-1.2
 5.5
-0.6
 4.9
-0.9
 2.3
0.2
 1.1
-0.9
 1.7
0.1
 -0.9
-1.3
35 CSF1R colony stimulating factor 1 receptor 711512 3.2 0.9
 2.7
 2.0
 1.2
 0.8
 1.9
 -0.0
 2.6
 2.4
 1.5
 0.7
 1.2
36 MS4A7 membrane spanning 4-domains A7 697200 3.2 0.9
 2.7
 3.3
 1.0
 1.2
 1.9
 1.2
 4.1
 3.5
 3.3
 2.6
 2.2
37 NCKAP1L NCK associated protein 1 like 705782 3.1 1.2
 2.3
 2.6
-1.3
 1.6
-0.7
 1.2
-1.0
 1.5
-1.1
 1.1
-1.8
 1.9
-0.8
 1.7
-0.8
 1.2
-0.9
 -0.4
-0.9
 1.2
-1.5
38 CD8A CD8a molecule 698329 3.1 2.0
 1.2
 2.4
 2.6
 0.6
 0.8
 4.0
 2.7
 2.9
 2.9
 -0.4
 0.8
39 LOC114679691 immunoglobulin heavy constant gamma 2-like 114679691 3.1 1.7











40 CLEC2D C-type lectin domain family 2 member D 717228 3.1 1.7
 1.6
 2.0
1.8
 1.5
1.5
 0.8
0.5
 0.9
0.7
 3.9
2.2
 3.0
1.1
 2.8
1.3
 2.2
1.0
 1.1
0.5
 2.5
0.7
41 CCL5 C-C motif chemokine ligand 5 574178 EGK_08420 3.1 1.6
 1.6
 2.3
1.1
 1.8
1.7
 1.0
1.0
 1.7
1.4
 2.3
0.4
 4.3
0.4
 4.6
-0.1
 2.6
2.3
 1.2
0.9
 3.2
2.2
 -0.8
-1.6
42 RASSF4 Ras association domain family member 4 706096 3.1 0.9
 2.5
 1.7
 1.5
 0.5
 1.1
 1.9
 2.8
 3.3
 1.1
 1.0
 1.0
43 GPR65 G protein-coupled receptor 65 693449 EGK_18440 3.1 1.4
 1.8
 2.0
 0.5
 0.4
 0.7
 0.3
 2.7
 3.0
1.0
 1.7
44 GSTM5 glutathione S-transferase mu 5 100426406 3.1 1.6
2.3
1.1
 2.3
1.4
 0.3
0.2
 0.6
0.2
 0.4
0.2
 1.2
0.6
 0.5
0.2
 1.7
0.2
 -0.1
 1.0
 -0.2
-1.0
45 SYK spleen associated tyrosine kinase 704102 EGK_07894 3.0 1.1
 2.2
 2.7
1.4
 2.5
-0.2
 0.6
0.0
 2.0
0.4
 2.4
2.0
 2.9
1.2
 2.6
1.3
 2.5
1.1
 1.2
0.2
 1.3
1.1
46 MAN2B1 mannosidase alpha class 2B member 1 716173 3.0 0.9
 2.4
 1.8
 0.9
 0.4
 0.7
 -0.1
 1.7
 1.2
 0.6
 1.8
 1.3
 -0.1
-0.7
47 CTSW cathepsin W 715505 EGK_05994 3.0 1.8
 1.3
 2.8
 1.9
 0.6
 1.0
 2.2
 2.2
 1.8
 2.3
 0.0
 0.6
48 PTPN6 protein tyrosine phosphatase non-receptor type 6 714374 3.0 1.0
 2.3
 1.4
-1.4
 2.1
-0.4
 0.2
-0.2
 1.4
-0.1
 0.8
-0.7
 1.7
-0.6
 2.2
-0.7
 1.5
-0.4
 1.2
0.3
 2.6
1.3
49 SYNE1 spectrin repeat containing nuclear envelope protein 1 711782 2.9 1.6
0.5
 0.7





0.1
 -0.4
50 RAC2 Rac family small GTPase 2 696709 EGK_03011 2.9 1.1
 2.2
 2.7
1.9
 2.1
1.9
 0.1
-0.1
 0.9
0.2
 0.8
0.6
 1.1
-0.1
 1.5
0.8
 2.2
-0.1
 -0.1
-0.3
 1.5
0.9
 -0.3
-0.5
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