Orthologous genes in OrthoFinder**

Species Gene Description
 dre-r.3   nphp3   nephronophthisis 3 
 dre-u.3   nphp3   nephronophthisis 3 
 hsa-u.4   NPHP3   nephrocystin 3 
 mmu-u.4   Nphp3   nephronophthisis 3 (adolescent) 
 rno-u.3   Nphp3   nephrocystin 3 
 gga-u.3   NPHP3   nephrocystin 3 
 mcc-u.3   NPHP3   nephrocystin 3 
 cfa-u.3   NPHP3   nephrocystin 3 

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Top 50 coexpressed genes to nphp3 (dre-r.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 dre3440   Homologous recombination  3 37 3.99
 dre310   Lysine degradation  3 81 2.98
 dre240   Pyrimidine metabolism  1 74 -
 dre230   Purine metabolism  1 165 -
 dre4218   Cellular senescence  2 200 -

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dre:nphp3 (nephronophthisis 3) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

dre-r.3
for
nphp3
dre-u.3
for
nphp3
hsa-u.4
for
NPHP3
mmu-u.4
for
Nphp3
rno-u.3
for
Nphp3
gga-u.3
for
NPHP3
mcc-u.3
for
NPHP3
cfa-u.3
for
NPHP3
1 ift81 intraflagellar transport 81 homolog 432390 2.9 5.6
 1.6
 0.9
 1.6
 1.2
2.3
2 msantd4 Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 570586 2.9 5.6
 0.6
 0.1
 2.0
 0.8
 -1.1
 -0.1
3 gon4la gon-4 like a 560418 2.6 4.9
 1.5
-0.8
 1.0
 1.3
 1.2
 1.0
0.4
 0.6
4 ranbp3a RAN binding protein 3a 394115 2.5 4.8
 -1.2
-1.2
 -1.8
 0.7
0.6
 0.9
-0.5
 1.3
0.4
 0.6
-1.3
5 mgaa MAX dimerization protein MGA a 569620 2.5 4.8
1.1
 -0.4
 0.7
 0.6
 1.0
6 rpgrip1l RPGRIP1 like 557688 2.5 4.8
 0.2
 0.5
 1.1
-0.8
 -0.6
 0.2
-0.2
 0.9
7 LOC100001665 fibrous sheath CABYR-binding protein-like 100001665 2.5 4.7





8 cep290 centrosomal protein 290 560588 2.5 4.7
 3.3
 1.4
 0.6
 1.4
 1.3
 2.1
9 znf532 zinc finger protein 532 559908 2.4 4.6
 0.5
-0.4
 1.2
-0.2
 2.1
1.6
 2.7
2.6
 1.3
-0.4
 1.8
0.7
10 ankib1a ankyrin repeat and IBR domain containing 1a 566524 2.4 4.5
 1.6
 0.4
 2.0
 -0.5
 0.2
 0.7
11 kmt2ca lysine (K)-specific methyltransferase 2Ca 560793 2.3 4.4
 -1.2
 1.2
 -0.3
 0.1
 0.2
 2.9
12 stat5b signal transducer and activator of transcription 5b 445474 2.3 4.3
 -0.2
-1.0
 0.3
-0.2
 0.5
-0.3
 0.1
 0.1
-1.1
 1.8
-0.4
13 rock1 Rho-associated, coiled-coil containing protein kinase 1 100329779 2.2 4.2
 1.0
0.8
 -0.1
-0.6
 0.4
0.1
 -0.8
-0.9
 0.4
-0.0
 2.1
1.8
14 wdr19 WD repeat domain 19 556414 2.2 4.2
 1.9
 2.9
 3.3
 1.3
 3.1
 3.5
15 cep104 centrosomal protein 104 560451 2.2 4.2
 1.1
 -0.1
 0.7
 0.2
 0.7
 -0.1
16 smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 497282 2.1 4.0
 0.6
 0.6
 1.1
 0.7
 0.9
 0.6
17 cnot3b CCR4-NOT transcription complex, subunit 3b 327627 2.1 4.0
 -0.4
 -1.2
 -0.4
-0.6
 -1.2
18 znf1014 zinc finger protein 1014 100141333 2.1 4.0





19 carf calcium responsive transcription factor 555728 2.1 3.9
0.9
 2.4
 1.1
 2.6
 -0.2
20 ift88 intraflagellar transport 88 homolog 321855 2.1 3.9
 2.5
 1.3
 2.1
 1.5
 1.2
 1.2
21 tmod2 tropomodulin 2 447869 2.1 3.9
 0.6
0.6
 0.2
0.2
 1.7
1.0
 1.2
 -0.0
-0.2
 0.4
0.0
22 ubtd1b ubiquitin domain containing 1b 571832 2.1 3.9
 1.0
0.5
 0.1
-0.8
 -0.9
 0.1
-0.2
 -1.4
-1.6
 0.7
-1.2
23 palb2 partner and localizer of BRCA2 558923 2.1 3.9
 -0.3
 0.6
 2.2
 0.2
 1.2
 -1.5
24 arid4b AT-rich interaction domain 4B 100537923 2.1 3.9
 1.1
1.0
 1.0
-0.3
 -0.2
-0.3
 1.1
-0.1
 1.2
0.9
 3.4
2.0
25 ppp6r2a protein phosphatase 6, regulatory subunit 2a 560729 2.0 3.9
 0.5
-0.9
 0.7
-0.4
 0.1
-0.8
 -0.2
-1.5
 0.6
-0.2
 1.4
-0.1
26 syt14a synaptotagmin XIVa 564702 2.0 3.8
 0.3

-0.8

27 atm ATM serine/threonine kinase 403064 2.0 3.8
1.5
 0.9
 2.3
 2.8
28 rab11fip2 RAB11 family interacting protein 2 100334729 2.0 3.8
 -0.1
 1.5
 0.7
 -0.4
 0.5
 2.5
29 kmt2a lysine (K)-specific methyltransferase 2A 557048 2.0 3.8
 1.0
 0.3
 0.5
 -1.1
 1.5
 0.3
30 cntrl centriolin 100334259 2.0 3.8
3.2
 1.4
 1.4
 1.8
 3.2
31 ttc14 tetratricopeptide repeat domain 14 541501 2.0 3.8
 4.4
 0.6
 0.6
 1.2
 1.5
 -0.8
32 lrsam1 leucine rich repeat and sterile alpha motif containing 1 562066 2.0 3.8
 0.6
 1.5
 1.0
 -0.0
 0.6
 -0.0
33 nsd1a nuclear receptor binding SET domain protein 1a 556086 2.0 3.7
1.2
 -0.1
 0.3
 0.1
 -0.2
34 ece2b endothelin converting enzyme 2b 793465 2.0 3.7
 1.0
 0.3
 2.5
-0.1
 1.3
0.1
 0.7
-0.5
 0.0
35 brpf3a bromodomain and PHD finger containing, 3a 100149254 2.0 3.7
 0.4
-0.3
 1.4
0.2
 1.1
0.7
 0.6
0.5
 -0.9
-1.2
 -0.4
-0.7
36 hmbox1b homeobox containing 1 b 100317353 2.0 3.7
 -0.8
 0.9
 -0.2
 1.4
 0.5
 -1.4
37 wwc1 WW and C2 domain containing 1 560785 2.0 3.7
 0.8
-1.6
 1.4
0.0
 1.5
0.2
 2.2
0.9
 0.8
-0.0
 1.4
0.0
38 nhsa Nance-Horan syndrome a (congenital cataracts and dental anomalies) 100150332 2.0 3.7
 -0.3
 1.7
 2.3
 0.2
 1.3
 -0.4
39 nme7 NME/NM23 family member 7 30086 2.0 3.7
 0.2
 0.2
 0.8
 0.9
 -1.2
 0.2
40 LOC101885783 phosphofurin acidic cluster sorting protein 1-like 101885783 2.0 3.7
 0.5
0.1
 0.2
-0.1
 1.0
0.2
 -0.4
-1.2
 0.1
-0.6
 1.0
-0.5
41 pkn1a protein kinase N1a 560840 1.9 3.7
 3.2
0.1
 1.5
1.3
 1.4
0.8
 1.8
1.6
 2.6
0.4
 2.4
1.2
42 nbn nibrin 544655 1.9 3.6
 -1.4
 0.1
 -0.2
 0.1
 -0.8
 0.2
43 rbm41 RNA binding motif protein 41 492764 1.9 3.6
 1.4
 2.1
 -0.6
 -1.4
 -0.2
 0.3
44 pla2r1 phospholipase A2 receptor 1 100538038 1.9 3.6
 0.9
-0.2
 0.8
-0.1
 0.5
0.1
 1.7
1.5
 0.4
-0.1
 0.2
0.1
45 spata6 spermatogenesis associated 6 550512 1.9 3.6
 1.1
 1.5
0.7
 1.1
0.7
 0.2
 0.6
 0.1
46 tead1b TEA domain family member 1b 100006454 1.9 3.6
 1.3
0.7
 -0.1
-0.1
 2.0
0.6
 2.2
0.9
 0.5
0.4
 0.7
0.7
47 map10 microtubule associated protein 10 101883254 1.9 3.6
 0.6
 -0.7
 1.7
 1.2
 1.1
 0.9
48 ppm1f protein phosphatase, Mg2+/Mn2+ dependent, 1F 553757 1.9 3.6
 -0.3
-0.4
 0.1
-0.2
 -0.2
-0.8
 -0.4
-0.4
 -0.8
-1.3
 -0.2
-0.8
49 wrn WRN RecQ like helicase 569495 1.9 3.6





50 il12rb2l interleukin 12 receptor, beta 2a, like 110437721 1.9 3.6





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