Orthologous genes in OrthoFinder**

Species Gene Description
 rno-u.3   H3c13   H3 clustered histone 13 
 rno-r.3   H3c13   H3 clustered histone 13 
 rno-u.3   H3c1   H3 clustered histone 1 
 rno-u.3   H3f3a   H3.3 histone A 
 mmu-u.4   H3c6   H3 clustered histone 6 
 mmu-u.4   H3c2   H3 clustered histone 2 
 mcc-u.3   114677671   histone H3.1-like 
 cfa-u.3   H3C14   H3 clustered histone 14 
 cfa-u.3   H3C1   H3 clustered histone 1 
 cfa-u.3   H3C7   H3 clustered histone 7 
 gga-u.3   H3F3C   H3 histone, family 3C 
 gga-u.3   100859629   histone H3.3-like 
 dre-u.3   h3f3a   H3 histone, family 3A 
 dre-u.3   108190747   histone H3-like 
 dre-u.3   si:dkey-261m9.8   si:dkey-261m9.8 
 cel-u.3   his-63   Histone H3 
 sce-u.3   HHT2   histone H3 
 sce-u.3   HHT1   histone H3 
 spo-u.3   hht2   histone H3 h3.2 
 spo-u.3   hht3   histone H3 h3.3 
 spo-u.3   hht1   histone H3 h3.1 

close


Top 50 coexpressed genes to H3c13 (rno-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 rno5322   Systemic lupus erythematosus  29 77 6.94
 rno5034   Alcoholism  29 133 6.85
 rno4613   Neutrophil extracellular trap formation  29 134 6.83
 rno5203   Viral carcinogenesis  13 178 5.99
 rno4217   Necroptosis  8 118 7.21

close


rno:H3c13 (H3 clustered histone 13) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

rno-u.3
for
H3c13
rno-r.3
for
H3c13
rno-u.3
for
H3c1
rno-u.3
for
H3f3a
mmu-u.4
for
H3c6
mmu-u.4
for
H3c2
mcc-u.3
for
114677671
cfa-u.3
for
H3C14
cfa-u.3
for
H3C1
cfa-u.3
for
H3C7
gga-u.3
for
H3F3C
gga-u.3
for
100859629
dre-u.3
for
h3f3a
dre-u.3
for
108190747
dre-u.3
for
si:dkey-261m9.8
cel-u.3
for
his-63
sce-u.3
for
HHT2
sce-u.3
for
HHT1
spo-u.3
for
hht2
spo-u.3
for
hht3
spo-u.3
for
hht1
1 LOC102548682 histone H4-like 102548682 18.7 10.1
 9.0
8.4
 1.7
1.2





0.8
 -0.3
 0.9
 7.2
 6.0





2 H4f3 H1.3 linker histone, cluster member 684828 16.8 9.1
 9.3
7.2
 2.6
2.1
 16.2
13.6
 15.8
15.8
 11.4
7.5
 5.2
5.1
 4.7
4.6
 10.3
8.7
 1.4
1.3
 2.5
1.7
 2.6
2.6
 9.2
8.5
 10.8
9.6
 2.2
1.9
 4.3
 4.1
 0.7
0.4
 0.6
0.6
 0.9
0.3
3 LOC100912338 histone H2B type 2-B-like 100912338 16.6 9.0
 10.6
10.1
 2.4
2.4
 16.8
15.9
 20.9
19.2
 7.3
7.1
 5.9
4.4
 3.9
3.8
 8.5
7.8
 0.8
-0.1
 1.6
0.4
 3.2
1.9
 11.3
9.7
 14.4
11.8
 14.4
12.6
 12.9
11.5
 14.9
11.1
 2.7
 3.4
 4.5
4 LOC100910200 histone H2B type 1-C/E/G-like 100910200 15.4 8.3
 10.6
10.1
 2.4
2.4
 16.8
15.9
 20.9
19.2
 7.3
7.1
 5.9
4.4
 3.9
3.8
 8.5
7.8
 0.8
-0.1
 1.6
0.4
 3.2
1.9
 11.3
9.7
 14.4
11.8
 14.4
12.6
 12.9
11.5
 14.9
11.1
 2.7
 3.4
 4.5
5 Hist1h2ao histone cluster 1, H2ao 364723 14.5 7.9
 7.7
6.7
 3.0
1.5
 16.1
15.5
 18.5
16.9
 8.3
6.9
 3.0
2.2
 3.7
2.7
 3.0
2.7
 0.6
0.0
 1.8
-0.1
 1.8
1.5
 9.9
9.6
 10.1
9.8
 13.6
12.7
 13.2
12.5
 21.1
13.1
 0.9
 -0.3
 -0.0
6 Hist1h2bq histone cluster 1 H2B family member Q 306945 12.7 6.9
 10.6
10.1
 2.4
2.4
 16.8
15.9
 20.9
19.2
 7.3
7.1
 5.9
4.4
 3.9
3.8
 8.5
7.8
 0.8
-0.1
 1.6
0.4
 3.2
1.9
 11.3
9.7
 14.4
11.8
 14.4
12.6
 12.9
11.5
 14.9
11.1
 2.7
 3.4
 4.5
7 Hist2h3c2 histone cluster 2 H3 family member C2 310678 12.5 6.8
 9.3
8.1
 4.1
1.8
 24.3
16.7
 19.9
19.5
 7.2
6.2
 4.1
3.9
 3.9
3.0
 4.9
4.1
 9.0
2.2
 2.2
1.2
 9.8
5.9
 14.6
11.3
 13.9
12.5
 14.3
7.8
 11.6
 11.6
 2.5
1.3
 7.2
2.5
 7.2
1.3
8 LOC103690190 histone H2A type 1-E 103690190 12.4 6.7
 10.5
10.1
 4.5
2.7
 17.4
13.8
 22.9
20.2
 12.4
8.9
 5.3
4.8
 4.2
4.0
 8.9
7.4
 0.8
0.2
 3.1
2.4
 6.2
4.9
 12.5
12.5
 11.8
11.5
 14.7
9.1
 13.0
11.5
 15.8
15.2
 4.9
 6.3
 7.2
9 LOC102551184 histone H4-like 102551184 12.1 6.6
 9.0
8.4
 1.7
1.2





0.8
 -0.3
 0.9
 7.2
 6.0





10 Hist1h2ai histone cluster 1, H2ai 100360754 11.3 6.1
 10.5
10.1
 4.5
2.7
 17.4
13.8
 22.9
20.2
 12.4
8.9
 5.3
4.8
 4.2
4.0
 8.9
7.4
 0.8
0.2
 3.1
2.4
 6.2
4.9
 12.5
12.5
 11.8
11.5
 14.7
9.1
 13.0
11.5
 15.8
15.2
 4.9
 6.3
 7.2
11 LOC102549173 histone H3.2-like 102549173 11.0 6.0


















12 hist1h2ail2 histone cluster 1, H2ai-like2 502129 10.8 5.9
 10.5
10.1
 4.5
2.7
 17.4
13.8
 22.9
20.2
 12.4
8.9
 5.3
4.8
 4.2
4.0
 8.9
7.4
 0.8
0.2
 3.1
2.4
 6.2
4.9
 12.5
12.5
 11.8
11.5
 14.7
9.1
 13.0
11.5
 15.8
15.2
 4.9
 6.3
 7.2
13 H1f5 H1.5 linker histone, cluster member 680522 10.7 5.8
 9.3
7.2
 2.6
2.1
 16.2
13.6
 15.8
15.8
 11.4
7.5
 5.2
5.1
 4.7
4.6
 10.3
8.7
 1.4
1.3
 2.5
1.7
 2.6
2.6
 9.2
8.5
 10.8
9.6
 2.2
1.9
 4.3
 4.1
 0.7
0.4
 0.6
0.6
 0.9
0.3
14 Hist1h3b histone cluster 1, H3b 680498 10.4 5.6
 9.3
8.1
 4.1
1.8
 24.3
16.7
 19.9
19.5
 7.2
6.2
 4.1
3.9
 3.9
3.0
 4.9
4.1
 9.0
2.2
 2.2
1.2
 9.8
5.9
 14.6
11.3
 13.9
12.5
 14.3
7.8
 11.6
 11.6
 2.5
1.3
 7.2
2.5
 7.2
1.3
15 LOC100364835 histone cluster 1, H2bd-like 100364835 10.1 5.5
 10.6
10.1
 2.4
2.4
 16.8
15.9
 20.9
19.2
 7.3
7.1
 5.9
4.4
 3.9
3.8
 8.5
7.8
 0.8
-0.1
 1.6
0.4
 3.2
1.9
 11.3
9.7
 14.4
11.8
 14.4
12.6
 12.9
11.5
 14.9
11.1
 2.7
 3.4
 4.5
16 H2bc12 H2B clustered histone 12 680312 10.1 5.5
 10.6
10.1
 2.4
2.4
 16.8
15.9
 20.9
19.2
 7.3
7.1
 5.9
4.4
 3.9
3.8
 8.5
7.8
 0.8
-0.1
 1.6
0.4
 3.2
1.9
 11.3
9.7
 14.4
11.8
 14.4
12.6
 12.9
11.5
 14.9
11.1
 2.7
 3.4
 4.5
17 Hist1h2ail1 histone cluster 1 H2a family member I like 1 291159 10.0 5.4
 9.3
8.1
 4.1
1.8
 24.3
16.7
 19.9
19.5
 7.2
6.2
 4.1
3.9
 3.9
3.0
 4.9
4.1
 9.0
2.2
 2.2
1.2
 9.8
5.9
 14.6
11.3
 13.9
12.5
 14.3
7.8
 11.6
 11.6
 2.5
1.3
 7.2
2.5
 7.2
1.3
18 Hist1h2ah histone cluster 1 H2A family member H 502125 9.8 5.3
 10.5
10.1
 4.5
2.7
 17.4
13.8
 22.9
20.2
 12.4
8.9
 5.3
4.8
 4.2
4.0
 8.9
7.4
 0.8
0.2
 3.1
2.4
 6.2
4.9
 12.5
12.5
 11.8
11.5
 14.7
9.1
 13.0
11.5
 15.8
15.2
 4.9
 6.3
 7.2
19 Hist3h2a histone cluster 3, H2a 64646 9.7 5.3
 10.5
10.1
 4.5
2.7
 17.4
13.8
 22.9
20.2
 12.4
8.9
 5.3
4.8
 4.2
4.0
 8.9
7.4
 0.8
0.2
 3.1
2.4
 6.2
4.9
 12.5
12.5
 11.8
11.5
 14.7
9.1
 13.0
11.5
 15.8
15.2
 4.9
 6.3
 7.2
20 LOC120097726 histone H2A type 1-F 120097726 9.5 5.2
 10.5
10.1
 4.5
2.7
 17.4
13.8
 22.9
20.2
 12.4
8.9
 5.3
4.8
 4.2
4.0
 8.9
7.4
 0.8
0.2
 3.1
2.4
 6.2
4.9
 12.5
12.5
 11.8
11.5
 14.7
9.1
 13.0
11.5
 15.8
15.2
 4.9
 6.3
 7.2
21 Hist1h4m histone cluster 1, H4m 291152 9.5 5.2
 7.7
6.7
 3.0
1.5
 16.1
15.5
 18.5
16.9
 8.3
6.9
 3.0
2.2
 3.7
2.7
 3.0
2.7
 0.6
0.0
 1.8
-0.1
 1.8
1.5
 9.9
9.6
 10.1
9.8
 13.6
12.7
 13.2
12.5
 21.1
13.1
 0.9
 -0.3
 -0.0
22 H1f2 H1.2 linker histone, cluster member 684681 8.5 4.6
 9.3
7.2
 2.6
2.1
 16.2
13.6
 15.8
15.8
 11.4
7.5
 5.2
5.1
 4.7
4.6
 10.3
8.7
 1.4
1.3
 2.5
1.7
 2.6
2.6
 9.2
8.5
 10.8
9.6
 2.2
1.9
 4.3
 4.1
 0.7
0.4
 0.6
0.6
 0.9
0.3
23 H3c1 H3 clustered histone 1 679994 7.2 4.0
 9.3
8.1
 4.1
1.8
 24.3
16.7
 19.9
19.5
 7.2
6.2
 4.1
3.9
 3.9
3.0
 4.9
4.1
 9.0
2.2
 2.2
1.2
 9.8
5.9
 14.6
11.3
 13.9
12.5
 14.3
7.8
 11.6
 11.6
 2.5
1.3
 7.2
2.5
 7.2
1.3
24 H2ac4 H2A clustered histone 4 680615 7.2 3.9
 10.5
10.1
 4.5
2.7
 17.4
13.8
 22.9
20.2
 12.4
8.9
 5.3
4.8
 4.2
4.0
 8.9
7.4
 0.8
0.2
 3.1
2.4
 6.2
4.9
 12.5
12.5
 11.8
11.5
 14.7
9.1
 13.0
11.5
 15.8
15.2
 4.9
 6.3
 7.2
25 LOC100360950 GF20391-like 100360950 7.1 3.9
 10.7
 0.6







1.2
 8.0
 10.0





26 Hist2h4 histone cluster 2, H4 295277 7.1 3.9
 7.7
6.7
 3.0
1.5
 16.1
15.5
 18.5
16.9
 8.3
6.9
 3.0
2.2
 3.7
2.7
 3.0
2.7
 0.6
0.0
 1.8
-0.1
 1.8
1.5
 9.9
9.6
 10.1
9.8
 13.6
12.7
 13.2
12.5
 21.1
13.1
 0.9
 -0.3
 -0.0
27 H1f1 H1.1 linker histone, cluster member 291145 7.1 3.9
 9.3
7.2
 2.6
2.1
 16.2
13.6
 15.8
15.8
 11.4
7.5
 5.2
5.1
 4.7
4.6
 10.3
8.7
 1.4
1.3
 2.5
1.7
 2.6
2.6
 9.2
8.5
 10.8
9.6
 2.2
1.9
 4.3
 4.1
 0.7
0.4
 0.6
0.6
 0.9
0.3
28 Hist1h4b histone cluster 1 H4 family member B 64627 6.8 3.7
 7.7
6.7
 3.0
1.5
 16.1
15.5
 18.5
16.9
 8.3
6.9
 3.0
2.2
 3.7
2.7
 3.0
2.7
 0.6
0.0
 1.8
-0.1
 1.8
1.5
 9.9
9.6
 10.1
9.8
 13.6
12.7
 13.2
12.5
 21.1
13.1
 0.9
 -0.3
 -0.0
29 LOC102549061 histone H2B type 1-N-like 102549061 6.6 3.6
 10.6
10.1
 2.4
2.4
 16.8
15.9
 20.9
19.2
 7.3
7.1
 5.9
4.4
 3.9
3.8
 8.5
7.8
 0.8
-0.1
 1.6
0.4
 3.2
1.9
 11.3
9.7
 14.4
11.8
 14.4
12.6
 12.9
11.5
 14.9
11.1
 2.7
 3.4
 4.5
30 LOC684797 similar to Histone H2B 291B 684797 6.5 3.5
 10.6
10.1
 2.4
2.4
 16.8
15.9
 20.9
19.2
 7.3
7.1
 5.9
4.4
 3.9
3.8
 8.5
7.8
 0.8
-0.1
 1.6
0.4
 3.2
1.9
 11.3
9.7
 14.4
11.8
 14.4
12.6
 12.9
11.5
 14.9
11.1
 2.7
 3.4
 4.5
31 H1f4 H1.4 linker histone, cluster member 201097 6.0 3.3
 9.3
7.2
 2.6
2.1
 16.2
13.6
 15.8
15.8
 11.4
7.5
 5.2
5.1
 4.7
4.6
 10.3
8.7
 1.4
1.3
 2.5
1.7
 2.6
2.6
 9.2
8.5
 10.8
9.6
 2.2
1.9
 4.3
 4.1
 0.7
0.4
 0.6
0.6
 0.9
0.3
32 H2ac20 H2A clustered histone 20 499675 5.9 3.3
 10.5
10.1
 4.5
2.7
 17.4
13.8
 22.9
20.2
 12.4
8.9
 5.3
4.8
 4.2
4.0
 8.9
7.4
 0.8
0.2
 3.1
2.4
 6.2
4.9
 12.5
12.5
 11.8
11.5
 14.7
9.1
 13.0
11.5
 15.8
15.2
 4.9
 6.3
 7.2
33 Hist2h2be histone cluster 2 H2B family member E 295274 5.4 2.9
 10.6
10.1
 2.4
2.4
 16.8
15.9
 20.9
19.2
 7.3
7.1
 5.9
4.4
 3.9
3.8
 8.5
7.8
 0.8
-0.1
 1.6
0.4
 3.2
1.9
 11.3
9.7
 14.4
11.8
 14.4
12.6
 12.9
11.5
 14.9
11.1
 2.7
 3.4
 4.5
34 Snx31 sorting nexin 31 366915 3.4 1.9
 0.2
 -0.8


0.1
 -0.7
 -0.1










35 LOC120101981 small nucleolar RNA SNORA73 family 120101981 3.4 1.9


















36 H2ax H2A.X variant histone 500987 3.3 1.8
 10.5
10.1
 4.5
2.7
 17.4
13.8
 22.9
20.2
 12.4
8.9
 5.3
4.8
 4.2
4.0
 8.9
7.4
 0.8
0.2
 3.1
2.4
 6.2
4.9
 12.5
12.5
 11.8
11.5
 14.7
9.1
 13.0
11.5
 15.8
15.2
 4.9
 6.3
 7.2
37 Socs4 suppressor of cytokine signaling 4 305828 3.2 1.8
 0.5
-0.7
 0.8
-1.2
 -0.5
-1.1
 0.1
-1.1
 1.3
0.1
 0.8
0.3
 0.0
-0.1
 0.8
0.6
 0.6
0.1
 1.7
0.1
 0.4
0.3
 2.1
-0.5
 1.9
-0.1





38 Trim17 tripartite motif-containing 17 64702 3.2 1.8
 0.9
0.7
 1.4
0.2
 0.8
0.5
 1.1
0.6
 0.9
0.7
 0.8
-0.2
 1.2
0.8
 0.9
0.8
 1.8
1.8
 3.1
1.3
 0.9
0.9
 1.4
1.2
 1.0
0.6


1.4
0.2
 -0.2
-0.6
 1.5
-0.9
39 Tubd1 tubulin, delta 1 287592 3.1 1.7
 0.2
 0.8
 1.4
 0.8
 -0.9
 1.6
 0.1
 3.2
 -0.3
 -0.0
 -1.1
 0.0
 0.2





40 LOC120100467 small nucleolar RNA SNORA12 120100467 3.0 1.7


















41 LOC120094899 small nucleolar RNA SNORA48 120094899 3.0 1.7


















42 Hist3h2ba histone cluster 3, H2ba 303175 3.0 1.7
 10.6
10.1
 2.4
2.4
 16.8
15.9
 20.9
19.2
 7.3
7.1
 5.9
4.4
 3.9
3.8
 8.5
7.8
 0.8
-0.1
 1.6
0.4
 3.2
1.9
 11.3
9.7
 14.4
11.8
 14.4
12.6
 12.9
11.5
 14.9
11.1
 2.7
 3.4
 4.5
43 LOC120099037 small nucleolar RNA U3 120099037 2.9 1.6


















44 Mamdc4 MAM domain containing 4 252882 2.8 1.6
 1.0
 1.4
 -0.5
 -0.1
 -0.2
 0.2
 -0.1
 0.3
 -1.5
 -0.2
 -0.6
-0.6
 0.4
-0.2
 0.5
-0.4





45 LOC120097633 small nucleolar RNA U13 120097633 2.8 1.6


















46 LOC120100488 small nucleolar RNA SNORD97 120100488 2.8 1.6


















47 Uros uroporphyrinogen III synthase 309070 2.8 1.5
 0.6
 0.9
 0.4
 0.3
 0.5
 -0.6
 0.1
 -0.4
 -0.2
 -0.7
 1.4
 -0.2
 0.1
0.2
 0.3


48 Mettl23 methyltransferase like 23 287918 2.7 1.5
 0.1
 2.0
 1.6
 0.8
 0.4
 -0.2
 1.8
 0.8
 2.3
 1.7



0.8
 -0.8


49 Terc telomerase RNA component 378461 2.7 1.5


















50 Coa4 cytochrome c oxidase assembly factor 4 homolog 499214 2.7 1.5
 0.7
 1.5
 0.8
 0.6
 1.1
 -0.9
 1.0
 -0.3










The preparation time of this page was 1.4 [sec].