Orthologous genes in OrthoFinder**

Species Gene Description
 rno-u.3   Clock   clock circadian regulator 
 rno-r.3   Clock   clock circadian regulator 
 rno-m.5   Clock   clock circadian regulator 
 mmu-u.4   Clock   circadian locomotor output cycles kaput 
 hsa-u.4   CLOCK   clock circadian regulator 
 mcc-u.3   CLOCK   clock circadian regulator 
 cfa-u.3   CLOCK   clock circadian regulator 
 gga-u.3   CLOCK   clock circadian regulator 
 dre-u.3   clocka   clock circadian regulator a 
 dre-u.3   clockb   clock circadian regulator b 
 dme-u.3   Clk   Clock 

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Top 50 coexpressed genes to Clock (rno-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 rno4120   Ubiquitin mediated proteolysis  3 137 2.08
 rno4611   Platelet activation  2 126 -
 rno4390   Hippo signaling pathway  2 158 -
 rno4530   Tight junction  3 167 -
 rno4144   Endocytosis  2 274 -

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rno:Clock (clock circadian regulator) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

rno-u.3
for
Clock
rno-r.3
for
Clock
rno-m.5
for
Clock
mmu-u.4
for
Clock
hsa-u.4
for
CLOCK
mcc-u.3
for
CLOCK
cfa-u.3
for
CLOCK
gga-u.3
for
CLOCK
dre-u.3
for
clocka
dre-u.3
for
clockb
dme-u.3
for
Clk
1 Arntl aryl hydrocarbon receptor nuclear translocator-like 29657 7.5 6.0
 1.1
 8.8
 -0.3
 0.7
 0.1
 3.0
 3.4
3.0
 3.0
2.7
 -0.6
2 Hipk3 homeodomain interacting protein kinase 3 83617 7.1 2.7
 4.1
 3.4
 3.5
 4.7
 2.5
 3.4
 1.8
 1.6
3 Ankib1 ankyrin repeat and IBR domain containing 1 368062 6.9 2.8
 3.8
 3.7
 4.3
 2.9
 2.8
 1.8
 1.9
1.5
 0.7
0.7
4 Lmtk2 lemur tyrosine kinase 2 304286 6.1 1.7
 4.0
 1.7
 0.7
 -0.1
 1.5
 2.0
 0.8
 0.5
5 Ypel2 yippee-like 2 360590 5.9 3.3
 2.3
 -0.6
-0.9
 -0.9
-1.2
 0.6
0.6
 -0.1
-0.4
 1.9
1.8
 1.6
0.9
 3.7
1.3
 -0.0
-0.5
6 Cep350 centrosomal protein 350 246304 5.8 2.5
 3.0
 2.3
 3.8
 4.5
 2.7
 2.1
 0.6
 0.4
7 Zbtb21 zinc finger and BTB domain containing 21 304056 5.7 3.2
3.1
 2.6
 0.9
 1.6
 -0.3
 -0.0
 2.2
8 Arnt aryl hydrocarbon receptor nuclear translocator 25242 5.4 1.1
 4.0
 -0.3
-1.2
 0.6
0.0
 1.5
-0.6
 1.8
1.1
 0.2
0.1
 4.2
1.7
 3.0
2.5
 -1.0
9 LOC102557111 WAS/WASL-interacting protein family member 3-like 102557111 5.3 2.9
3.5
3.4
 4.4
3.6
 3.0
 1.5
-0.8
 0.8
0.4
 1.7
1.4
 2.2
1.8
 -0.2
10 Trip11 thyroid hormone receptor interactor 11 314393 5.3 1.9
 3.2
 5.3
 4.7
 1.8
 1.4
 4.5
 0.6
 1.5
 1.3
11 Rest RE1-silencing transcription factor 83618 5.3 1.2
 3.9
 -0.1
 3.0
 1.9
 2.1
 3.4
 -0.2
 1.3
12 Birc6 baculoviral IAP repeat-containing 6 313876 5.3 2.9
2.8
 4.1
 3.7
 2.6
 2.7
 3.0
 1.2
 0.8
13 Tjp1 tight junction protein 1 292994 5.3 2.4
 2.7
 0.5
 2.1
 1.6
 1.1
 1.3
 0.5
0.5
 0.4
-0.2
 0.5
14 Uhmk1 U2AF homology motif kinase 1 246332 5.3 1.2
 3.9
 1.6
 4.9
 2.5
 1.0
 -0.6
 0.6
 1.4
15 Rc3h1 ring finger and CCCH-type domains 1 680586 5.1 2.8
3.6
3.0
 3.1
1.9
 4.9
1.1
 1.0
-0.1
 2.8
1.8
 2.5
2.3
 2.6
2.5
 0.2
16 Rock2 Rho-associated coiled-coil containing protein kinase 2 25537 5.0 3.2
 1.6
 4.2
2.7
 4.2
2.8
 4.2
0.8
 2.1
0.6
 4.4
1.1
 1.0
-0.5
 2.3
-0.7
 0.2
17 Taok1 TAO kinase 1 286993 4.9 3.6
 1.1
 5.9
0.2
 5.1
0.9
 2.9
-0.4
 3.0
-0.5
 1.7
1.3
 4.8
0.3
 3.9
1.5
18 Pank3 pantothenate kinase 3 360511 4.9 2.3
 2.5
 3.5
-0.1
 3.9
0.7
 3.9
0.2
 3.4
1.1
 2.2
-0.3
 0.3
-0.5
 1.5
1.3
 0.2
19 Tet2 tet methylcytosine dioxygenase 2 310859 4.9 2.7
3.4
 3.4
 1.9
 -0.0
 1.7
 0.3
 1.9
 1.1
20 Mob1b MOB kinase activator 1B 360920 4.8 1.7
 3.0
 2.9
1.5
 2.7
0.9
 1.5
0.4
 4.6
1.0
 2.3
-0.5
 0.3
-0.3
 0.4
0.4
 0.7
0.2
21 Npas2 neuronal PAS domain protein 2 316351 4.7 4.3
 0.3
 7.0
 2.3
 2.3
 -1.4
 2.6
0.5
 6.6
 3.4
22 Eea1 early endosome antigen 1 314764 4.7 3.5
 1.0
 5.8
 5.3
 4.7
 1.3
 3.5
 0.5
 0.0
23 Sash1 SAM and SH3 domain containing 1 365037 4.7 2.6
2.2
 1.2
 0.2
 0.2
 0.8
 2.1
-0.7
 1.5
-0.2
24 Atxn7 ataxin 7 361015 4.6 3.2
 1.2
 1.3
-0.5
 -1.1
 1.0
0.5
 2.3
-0.5
 4.2
3.7
 3.0
2.9
 2.8
2.8
25 Itpk1 inositol-tetrakisphosphate 1-kinase 500709 4.6 1.2
 3.3
 2.8
 0.3
 0.1
 -0.5
 1.5
 2.4
-0.7
 2.5
-0.1
26 Lonrf3 LON peptidase N-terminal domain and ring finger 3 298322 4.6 2.6
3.6
0.6
 0.7
0.6
 1.1
0.7
 1.0
0.8
 3.9
2.1
 1.4
0.6
 2.3
0.7
 3.0
27 Frs2 fibroblast growth factor receptor substrate 2 314850 4.6 2.3
 2.1
 2.7
0.1
 4.0
-0.4
 2.2
-0.1
 1.1
-0.6
 0.3
-0.2
 3.4
0.5
 2.6
1.9
 -0.2
28 Wapl WAPL cohesin release factor 290577 4.5 2.5
 1.9
 2.6
 1.3
 0.8
 2.7
 0.1
 2.0
0.6
 3.0
0.8
 -0.3
29 Hectd1 HECT domain E3 ubiquitin protein ligase 1 362736 4.4 2.0
 2.3
 0.9
 4.2
 4.1
 2.6
 4.0
 1.0
 0.4
 -0.0
30 Hectd2 HECT domain E3 ubiquitin protein ligase 2 309514 4.4 1.8
 2.4
 2.4
1.5
 0.1
 4.4
 0.8
 2.9
31 Ralgapa1 Ral GTPase activating protein catalytic subunit alpha 1 56785 4.4 2.6
 1.6
 2.7
0.4
 1.4
-1.2
 4.0
2.5
 0.5
0.3
 1.0
1.0
 1.6
0.8
 0.9
0.4
 -0.7
32 Nek9 NIMA-related kinase 9 299204 4.4 0.9
 3.3
 -0.1
 -0.1
 1.0
 0.9
 1.0
 -0.6
 0.4
33 Prkci protein kinase C, iota 84006 4.4 2.4
 1.8
 3.1
1.0
 1.5
-0.4
 1.7
0.8
 2.3
0.0
 1.2
-1.6
 0.2
-1.1
 -0.6
-0.8
 -0.0
34 Ecpas Ecm29 proteasome adaptor and scaffold 313196 4.3 1.8
 2.4







35 Ralgapb Ral GTPase activating protein non-catalytic subunit beta 362257 4.3 2.4
3.2
 3.0
 3.2
 5.4
 1.5
 2.3
 1.8
 -0.2
36 Ric1 RIC1 homolog, RAB6A GEF complex partner 1 309306 4.2 2.3
3.4
 1.5
 2.1
 1.5
 1.3
 3.2
 1.9
 0.6
37 Cul5 cullin 5 64624 4.2 2.1
 2.0
 2.0
 2.4
 1.4
 1.5
 2.2
 -0.7
-1.0
 0.7
-1.1
 -0.4
38 Ythdf3 YTH N(6)-methyladenosine RNA binding protein 3 361920 4.2 2.3
 1.8
 3.3
-0.0
 2.0
-0.3
 2.6
-0.8
 1.0
0.6
 2.3
0.4
 1.6
0.7
 1.8
1.6
 -0.6
39 Ythdc2 YTH domain containing 2 307446 4.2 2.3
3.9
 1.9
 1.1
 0.8
 0.3
 1.7
 0.4
40 Zmynd11 zinc finger, MYND-type containing 11 291259 4.2 2.2
 1.9
 2.2
 3.9
 3.2
 0.4
 1.8

-0.3
41 Jmjd1c jumonji domain containing 1C 171120 4.2 2.4
 1.6
 3.2
 1.9
 1.5
 -0.1
 2.2
 3.3
 2.7
42 Lnpep leucyl and cystinyl aminopeptidase 171105 4.1 1.3
 2.7
 2.3
 3.4
 2.3
 2.6
 1.6
 0.9
 1.2
43 Fgd4 FYVE, RhoGEF and PH domain containing 4 246174 4.1 1.9
 2.1
 1.6
-1.9
 0.2
 1.0
-0.5
 -0.5
-0.9
 1.8
 1.5
0.8
 2.1
-0.1
44 Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 304759 4.1 2.1
 1.8







45 Clcn5 chloride voltage-gated channel 5 25749 4.1 1.1
 2.8
 1.6
1.0
 3.4
0.5
 1.7
1.6
 3.5
1.1
 2.4
1.0
 2.2
2.0
 4.0
2.3
 -1.1
46 Jmy junction mediating and regulatory protein, p53 cofactor 683593 4.1 2.3
1.3
 1.6
 0.6
 0.4
 0.0
 0.9
 1.4
47 Cdc42bpa CDC42 binding protein kinase alpha 114116 4.0 2.4
 1.5
 2.7
2.4
 3.7
2.5
 2.0
1.1
 1.4
0.7
 2.0
1.5
 2.7
0.8
 1.2
0.6
 -0.4
48 Ahr aryl hydrocarbon receptor 25690 4.0 1.7
 2.2
 1.5
 1.4
 1.2
 0.5
 1.9
0.1
 1.0
-0.1
 1.2
0.1
 0.4
49 Ddx3x DEAD-box helicase 3, X-linked 317335 4.0 2.1
 1.7
 2.8
1.2
 1.3
0.7
 1.3
0.2
 0.8
-0.5
 2.4
-1.6
 0.6
-0.4
 1.1
0.7
 0.1
0.1
50 Ube4a ubiquitination factor E4A 315608 4.0 0.8
 3.1
 -0.3
 1.6
 0.7
 1.1
 0.2
 0.6
 1.6
 0.5
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