Orthologous genes in OrthoFinder**

Species Gene Description
 sce-u.3   SSU72   RNA polymerase II subunit A C-terminal domain phosphatase 
 sce-r.3   SSU72   RNA polymerase II subunit A C-terminal domain phosphatase 
 sce-m.4   SSU72   RNA polymerase II subunit A C-terminal domain phosphatase 
 hsa-u.4   SSU72   SSU72 homolog, RNA polymerase II CTD phosphatase 
 mmu-u.4   Ssu72   Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) 
 rno-u.3   Ssu72   SSU72 homolog, RNA polymerase II CTD phosphatase 
 gga-u.3   SSU72   SSU72 homolog, RNA polymerase II CTD phosphatase 
 dre-u.3   ssu72   SSU72 homolog, RNA polymerase II CTD phosphatase 
 dme-u.3   Ssu72   Ssu72 CTD phosphatase 
 cel-u.3   ssup-72   RNA polymerase II subunit A C-terminal domain phosphatase ssup-72 
 mcc-u.3   SSU72   SSU72 homolog, RNA polymerase II CTD phosphatase 
 cfa-u.3   SSU72   SSU72 homolog, RNA polymerase II CTD phosphatase 

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Top 50 coexpressed genes to SSU72 (sce-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 sce3015   mRNA surveillance pathway  4 47 3.15
 sce4120   Ubiquitin mediated proteolysis  2 51 -
 sce3013   Nucleocytoplasmic transport  2 65 -
 sce4111   Cell cycle - yeast  4 130 -
 sce4113   Meiosis - yeast  3 133 -

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sce:SSU72 (RNA polymerase II subunit A C-terminal domain phosphatase) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

sce-u.3
for
SSU72
sce-r.3
for
SSU72
sce-m.4
for
SSU72
hsa-u.4
for
SSU72
mmu-u.4
for
Ssu72
rno-u.3
for
Ssu72
gga-u.3
for
SSU72
dre-u.3
for
ssu72
dme-u.3
for
Ssu72
cel-u.3
for
ssup-72
mcc-u.3
for
SSU72
cfa-u.3
for
SSU72
1 NEL1 GTPase-activating protein NEL1 856430 YHR035W 5.6 2.5
 2.9








2 PTI1 cleavage polyadenylation factor subunit PTI1 853060 YGR156W 4.6 2.4
 2.0








3 HRP1 Hrp1p 853997 YOL123W 4.6 2.4
 2.1
 -0.7
-1.0
 0.1
 -0.3
-0.8
 -0.2
-0.5
 0.4
-1.0
 0.8
-0.5
 -1.1
 -0.3
-0.5
4 PDL32 putative ADP-ribose 1''-phosphate phosphatase 855112 YMR087W 4.5 1.4
 2.9








5 EXO70 GTP-Rho binding exocyst subunit EXO70 853359 YJL085W 4.4 2.3
 2.0
0.5
0.1
 2.1
 0.8
 0.7
 0.1
 3.3
6 PCF11 Pcf11p 851814 YDR228C 4.4 2.5
 1.8
 1.4
 0.4
 -0.1
 2.2
 -0.6
 1.0
 1.0
 -1.5
 0.0
7 EMC5 Emc5p 854785 YIL027C 4.3 2.2
 2.0








8 ORC5 origin recognition complex subunit 5 855460 YNL261W 4.1 2.0
 2.1
 -0.5
 -0.1
 0.3
 -0.2
 0.9
 0.1
 3.5
 0.3
 -0.8
9 HNT2 bis(5'-adenosyl)-triphosphatase 851899 YDR305C 4.0 2.5
 1.4
-0.3
 1.6
 2.1
 1.8

1.3
10 NRD1 Nrd1 complex RNA-binding subunit 855470 YNL251C 3.9 1.7
 2.1








11 ANR2 Anr2p 853819 YKL047W 3.9 1.7
 2.1








12 YLR036C uncharacterized protein 850725 YLR036C 3.9 2.2









13 VPS28 ESCRT-I subunit protein VPS28 856040 YPL065W 3.9 1.7
 2.1
 1.4
 4.2
 6.7
 -1.1
 0.7
 1.0
 1.1
 3.3
 1.3
14 SHU2 Shu2p 851650 YDR078C 3.8 1.3
 2.4








15 VPH2 Vph2p 853741 YKL119C 3.8 1.6
 2.1








16 RHO2 Rho family GTPase RHO2 855634 YNL090W 3.8 2.2
 1.5








17 YGR117C uncharacterized protein 853014 YGR117C 3.7 1.3
 2.2








18 RET3 coatomer subunit zeta 856097 YPL010W 3.7 2.0
 1.6
 1.9
-0.1
 1.3
-1.3
 2.2
1.2
 2.3
 2.4
-1.2
 1.5
 1.2
 3.3
0.7
 0.8
19 KAP120 Kap120p 855978 YPL125W 3.6 2.0
 1.5
 -1.1
 -0.7
 0.8
 -0.3
 -1.1
 1.0
-0.2
 -1.6
20 RKM5 S-adenosylmethionine-dependent methyltransferase 850828 YLR137W 3.5 1.3
 2.1








21 ROY1 Roy1p 855300 YMR258C 3.5 1.6
 1.8








22 MPD2 protein disulfide isomerase MPD2 854065 YOL088C 3.5 1.6
 1.8








23 RRN3 rDNA-binding RNA polymerase I transcriptional factor 853734 YKL125W 3.5 1.4
 2.0
 -0.5
 1.8
 0.8
 0.7
 -0.0
 1.7
 -1.1
 -1.4
 -0.6
24 LSM12 Lsm12p 856521 YHR121W 3.4 1.6
 1.7
 1.0
-1.7
 2.4
 2.5
 1.8
 1.2
-0.6
 3.2
 2.6
 3.7
 0.5
25 KEG1 Keg1p 850603 YFR042W 3.3 1.4
 1.8








26 TYW3 tRNA methyltransferase TYW3 852832 YGL050W 3.3 1.7
 1.5
 1.5
 -0.9
 -0.2
 -0.4
 0.7

0.6
 -1.1
27 SEC72 Sec63 complex subunit SEC72 850999 YLR292C 3.2 1.6
 1.6








28 APC4 anaphase promoting complex subunit 4 851696 YDR118W 3.1 1.8









29 MIT1 Mit1p 856711 YEL007W 3.1 0.6
 2.4








30 YCR090C uncharacterized protein 850452 YCR090C 3.1 2.1
 0.9
1.7
 4.7
 -0.1
 1.5
 0.6
 -0.2
 3.2
 1.5
31 NUT1 Nut1p 852726 YGL151W 3.1 1.6
 1.5








32 APC11 anaphase promoting complex subunit 11 851554 YDL008W 3.1 1.6
 1.4
 1.4
 2.0
 2.4
1.4
3.3
 1.0
 1.1
33 ARP10 Arp10p 851683 YDR106W 3.0 1.7









34 GPI15 phosphatidylinositol N-acetylglucosaminyltransferase GPI15 855690 YNL038W 3.0 1.7









35 RNA14 cleavage polyadenylation factor subunit RNA14 855083 YMR061W 3.0 1.2
 1.7
 0.0
 0.2
 0.8
 3.6
 1.5
 1.5
 0.0
 0.3
 0.5
36 HSL7 protein arginine N-methyltransferase 852431 YBR133C 3.0 1.6
 1.3
 1.8
 -0.5
 0.2
 -1.2
 -0.1
 0.8
 -0.4
 0.2
 0.1
37 PSF1 DNA replication protein PSF1 851576 YDR013W 3.0 0.8
 2.1
 -1.5
 -1.3
 -1.2
 -1.5
 -0.1
 1.6
 4.4
 0.7
 2.3
38 RRD2 peptidylprolyl isomerase RRD2 855951 YPL152W 3.0 1.4
 1.6
 1.3
 -0.9
 0.2
 0.1
 -0.3
 0.9
-0.1
 1.5
 1.0
 0.8
39 KAP122 Kap122p 852868 YGL016W 3.0 2.0
 1.0








40 KAP114 Kap114p 852610 YGL241W 3.0 1.3
 1.6
 0.1
 -1.0
 0.1
 -1.7
 -2.0
 0.4
-0.6
 -1.0
41 MAK3 peptide alpha-N-acetyltransferase MAK3 856163 YPR051W 3.0 1.4
 1.5
 -0.4
 -0.7
 -1.0
 1.4
 -0.6
 4.6
-0.7
 0.5
 1.2
 -0.4
42 CTF8 Ctf8p 856598 YHR191C 3.0 1.6
 1.3








43 DFG10 putative polyprenol reductase 854762 YIL049W 2.9 0.9
 2.0
 0.6
 1.9
 -0.9
 -0.4
 -0.4
 -0.2
 2.3
 1.6
 1.5
44 POP5 RNA-binding protein POP5 851200 YAL033W 2.9 1.4
 1.5
 2.2
 1.8
 0.7
 1.4
 0.6
 0.1
 1.1
 2.5
 0.8
45 PHA2 prephenate dehydratase PHA2 855400 YNL316C 2.9 1.5
 1.4








46 TRS33 Trs33p 854282 YOR115C 2.9 1.3
 1.6
 -0.4
-1.1
 1.7
1.7
 2.3
1.4
 1.9
 1.4
0.1
 -0.3
 2.2
 2.1
0.6
 1.6
0.6
47 RPC25 DNA-directed RNA polymerase III subunit RPC25 853713 YKL144C 2.9 1.4
 1.5
 3.2
 0.5
 -0.3
 0.3
 0.8
 2.6
 1.6
 1.9
 -0.5
48 YMR209C uncharacterized protein 855249 YMR209C 2.9 1.2
 1.6








49 YHC3 amino acid transporter YHC3 853387 YJL059W 2.9 1.0
 1.8








50 ADD66 Add66p 853629 YKL206C 2.9 1.1
 1.8








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