Orthologous genes in OrthoFinder**

Species Gene Description
 sce-u.3   USA1   Usa1p 
 sce-r.3   USA1   Usa1p 
 sce-m.4   USA1   Usa1p 

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Top 50 coexpressed genes to USA1 (sce-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 sce4138   Autophagy - yeast  4 90 2.12
 sce4136   Autophagy - other  3 23 3.01
 sce480   Glutathione metabolism  1 23 -
 sce4120   Ubiquitin mediated proteolysis  2 51 -
 sce4141   Protein processing in endoplasmic reticulum  3 93 -

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sce:USA1 (Usa1p) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target

sce-u.3
for
USA1
sce-r.3
for
USA1
sce-m.4
for
USA1
1 HRD3 ubiquitin ligase complex subunit HRD3 850904 YLR207W 5.9 3.2
 2.5
2 DCR2 phosphoprotein phosphatase 851075 YLR361C 5.0 2.4
 2.4
3 UBX2 Ubx2p 854995 YML013W 4.6 1.8
 2.6
4 GMC1 putative oxidoreductase 852117 YDR506C 4.3 2.2
 2.0
5 YIL001W uncharacterized protein 854816 YIL001W 4.3 2.7
 1.5
6 RTT101 cullin RTT101 853400 YJL047C 4.2 2.4
7 TAX4 Tax4p 853362 YJL083W 4.1 2.5
 1.5
8 YDL109C putative lipase 851449 YDL109C 4.0 2.3
9 ATG15 triglyceride lipase ATG15 850432 YCR068W 3.8 1.8
 1.9
10 KRE5 Kre5p 854514 YOR336W 3.7 1.8
 1.9
11 TAG1 Tag1p 850870 YLR173W 3.7 1.9
 1.7
12 SWA2 Swa2p 851918 YDR320C 3.5 2.1
 1.4
13 WAR1 War1p 854899 YML076C 3.5 2.0
14 VPS5 sorting nexin 1 854235 YOR069W 3.5 1.9
 1.6
15 HSF1 stress-responsive transcription factor HSF1 852806 YGL073W 3.5 2.0
 1.5
16 YMR160W uncharacterized protein 855195 YMR160W 3.5 1.8
 1.6
17 CRT10 Crt10p 854091 YOL063C 3.5 2.0
18 GEM1 ERMES complex Ca(2+)-binding regulatory GTPase GEM1 851249 YAL048C 3.4 1.8
 1.6
19 ATG18 phosphoinositide binding protein ATG18 850577 YFR021W 3.4 1.9
 1.4
20 RGT1 Rgt1p 853828 YKL038W 3.4 2.4
 0.9
21 SNT2 DNA-binding E3 ubiquitin-protein ligase SNT2 852746 YGL131C 3.3 1.4
 1.9
22 PTM1 Ptm1p 853827 YKL039W 3.2 1.8
23 PAN1 Pan1p 854822 YIR006C 3.2 1.4
 1.7
24 YML037C uncharacterized protein 854971 YML037C 3.2 1.8
25 MLH1 mismatch repair ATPase MLH1 855203 YMR167W 3.2 1.6
 1.6
26 GPB1 Gpb1p 854553 YOR371C 3.2 2.1
 1.0
27 OXP1 5-oxoprolinase 853665 YKL215C 3.2 1.9
 1.2
28 ADP1 putative ATP-dependent permease ADP1 850369 YCR011C 3.1 1.3
 1.7
29 PEX1 AAA family ATPase peroxin 1 853636 YKL197C 3.1 1.9
 1.2
30 ERC1 Erc1p 856427 YHR032W 3.1 1.2
 1.9
31 VAC7 Vac7p 855673 YNL054W 3.1 1.8
 1.3
32 TUL1 ubiquitin-protein ligase TUL1 853832 YKL034W 3.1 1.2
 1.8
33 MGR1 Mgr1p 850313 YCL044C 3.1 1.1
 1.9
34 NPR2 nitrogen permease regulating protein NPR2 856647 YEL062W 3.0 2.0
 1.0
35 RAV1 Rav1p 853490 YJR033C 3.0 2.0
 1.0
36 CBK1 serine/threonine protein kinase CBK1 855561 YNL161W 3.0 1.3
 1.7
37 MYO5 myosin 5 855136 YMR109W 3.0 1.4
 1.5
38 FAR11 Far11p 855596 YNL127W 3.0 1.4
 1.5
39 RAD10 DNA repair protein RAD10 854878 YML095C 2.9 1.5
 1.4
40 SLH1 putative RNA helicase 853187 YGR271W 2.9 1.7
41 VPS34 phosphatidylinositol 3-kinase VPS34 850941 YLR240W 2.9 1.3
 1.6
42 TDP1 tyrosyl-DNA phosphodiesterase 1 852525 YBR223C 2.9 1.7
 1.2
43 UBA3 NEDD8-activating protein UBA3 856179 YPR066W 2.9 1.3
 1.5
44 YBR220C uncharacterized protein 852521 YBR220C 2.9 1.2
 1.6
45 SYP1 Syp1p 850396 YCR030C 2.9 1.4
 1.4
46 APC4 anaphase promoting complex subunit 4 851696 YDR118W 2.9 1.6
47 VPS15 ubiquitin-binding serine/threonine protein kinase VPS15 852394 YBR097W 2.8 1.6
48 GIP4 protein phosphatase regulator GIP4 851202 YAL031C 2.8 1.2
 1.6
49 TRM5 tRNA (guanine) methyltransferase 856467 YHR070W 2.8 1.2
 1.6
50 APL2 Apl2p 853723 YKL135C

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