Orthologous genes in OrthoFinder**

Species Gene Description
 sce-u.3   HSH49   U2 snRNP complex subunit HSH49 
 sce-r.3   HSH49   U2 snRNP complex subunit HSH49 
 sce-m.4   HSH49   U2 snRNP complex subunit HSH49 
 hsa-u.4   SF3B4   splicing factor 3b subunit 4 
 mmu-u.4   Sf3b4   splicing factor 3b, subunit 4 
 rno-u.3   Sf3b4   splicing factor 3b, subunit 4 
 gga-u.3   SF3B4   splicing factor 3b subunit 4 
 dre-u.3   sf3b4   splicing factor 3b, subunit 4 
 dme-u.3   Spx   Spliceosomal protein on the X 
 cel-u.3   sap-49   Splicing factor 3B subunit 4 
 mcc-u.3   SF3B4   splicing factor 3b subunit 4 
 cfa-u.3   SF3B4   splicing factor 3b subunit 4 

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Top 50 coexpressed genes to HSH49 (sce-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 sce3008   Ribosome biogenesis in eukaryotes  4 78 2.34
 sce563   Glycosylphosphatidylinositol (GPI)-anchor biosynthesis  1 25 -
 sce3020   RNA polymerase  2 31 -
 sce3013   Nucleocytoplasmic transport  1 65 -
 sce3040   Spliceosome  2 81 -

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sce:HSH49 (U2 snRNP complex subunit HSH49) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

sce-u.3
for
HSH49
sce-r.3
for
HSH49
sce-m.4
for
HSH49
hsa-u.4
for
SF3B4
mmu-u.4
for
Sf3b4
rno-u.3
for
Sf3b4
gga-u.3
for
SF3B4
dre-u.3
for
sf3b4
dme-u.3
for
Spx
cel-u.3
for
sap-49
mcc-u.3
for
SF3B4
cfa-u.3
for
SF3B4
1 LST7 Lst7p 852948 YGR057C 6.7 3.0
 3.5








2 RTR1 RNA polymerase II subunit B1 CTD phosphatase RTR1 856882 YER139C 5.0 2.2
 2.7
 -1.0
 -2.6
 -1.3
 -0.2
 -0.4
 -0.5
 -0.9
 -1.4
3 POP4 RNase P/RNase MRP complex subunit 852560 YBR257W 4.8 2.4
 2.2
 1.1
 1.2
 1.5
 -0.3
 -0.7
 -1.0
 0.7
 2.2
 0.3
4 POP6 ribonuclease P/MRP protein subunit POP6 852918 YGR030C 4.5 2.5









5 YCL002C uncharacterized protein 850353 YCL002C 4.5 2.6









6 YML108W uncharacterized protein 854863 YML108W 4.3 2.2
 2.0








7 SLM4 Slm4p 852369 YBR077C 4.2 1.9
 2.2








8 PRP28 mRNA splicing protein PRP28 851830 YDR243C 4.2 1.8
 2.3
 1.4
 0.7
 1.9
2.6
 1.3
 3.2
 1.6
 3.1
9 OAZ1 Oaz1p 856055 YPL052W 4.2 2.4









10 THG1 tRNA guanylyltransferase 852908 YGR024C 4.0 2.1
 1.9
 -0.4
 0.6
 0.6
 0.2
 0.9
 -0.5
0.6
 0.9
11 MTQ2 S-adenosylmethionine-dependent methyltransferase 851718 YDR140W 3.9 2.3
 1.5
 -1.3
 -0.0
 -0.5
 -0.7
 1.2
-0.0
 -1.6
 -0.4
12 CSN9 Csn9p 851759 YDR179C 3.9 2.5
 1.3








13 CTK2 Ctk2p 853450 YJL006C 3.9 2.3
 1.5








14 NVJ3 Nvj3p 851760 YDR179W-A 3.7 2.1









15 PEX15 Pex15p 854113 YOL044W 3.7 2.1









16 SAS2 histone acetyltransferase 855157 YMR127C 3.7 2.2
 1.4








17 PMP2 proteolipid ATPase 856697 YEL017C-A 3.6 2.1









18 POP8 ribonuclease P 852263 YBL018C 3.6 1.9
 1.6








19 SDC1 Sdc1p 852080 YDR469W 3.6 2.0
-0.8
 1.8
 1.7
 -0.7
 1.4
 2.5
0.2
 2.1
 0.7
 3.3
20 FAR3 Far3p 855073 YMR052W 3.5 1.4
 1.9








21 SNM1 Snm1p 852089 YDR478W 3.5 1.9
 1.5








22 IRC19 Irc19p 850626 YLL033W 3.4 1.2
 2.1








23 MAC1 Mac1p 855035 YMR021C 3.4 1.7
 1.7








24 BCP1 protein-transporting protein BCP1 851963 YDR361C 3.4 1.9
 1.5
 1.3
 0.4
 -0.4
 -0.8
 0.4
 -0.3
 0.6
 -0.8
 0.3
25 RPB10 DNA-directed RNA polymerase core subunit RPB10 854385 YOR210W 3.4 1.9
 1.4
 1.2
 1.0
 -1.0
 -2.0
 1.6
 0.3
 1.3
 -1.1
 1.4
26 RRG7 Rrg7p 854482 YOR305W 3.4 1.7
 1.7








27 LAS1 rRNA-processing protein LAS1 853937 YKR063C 3.4 1.7
 1.6
 0.6
 0.4
 0.6
 -0.3
 1.1
 1.1
 -0.2
 2.1
 2.2
28 YDR249C uncharacterized protein 851836 YDR249C 3.4 1.6
 1.7








29 IZH2 PAQR-type receptor 854160 YOL002C 3.4 1.7
 1.6
 3.1
0.2
 -0.7
-1.1
 0.0
-1.5
 0.5
0.3
 0.0
-0.5
 -0.7
 0.9
-0.1
 0.1
-0.8
 0.8
0.5
30 YLR456W pyridoxal 5'-phosphate synthase 851178 YLR456W 3.3 1.9









31 DRN1 Drn1p 852985 YGR093W 3.3 1.6
 1.6
 0.8
 1.4
 0.2
 3.2
 1.9
 0.7
 0.9
 -1.3
 1.2
32 YAE1 Yae1p 853530 YJR067C 3.3 1.5
 1.8








33 GPI15 phosphatidylinositol N-acetylglucosaminyltransferase GPI15 855690 YNL038W 3.3 1.9









34 ECM9 Ecm9p 853873 YKR004C 3.3 1.6
 1.7








35 RAD10 DNA repair protein RAD10 854878 YML095C 3.3 1.2
 2.0
 0.5
 3.4
 4.4
-1.2
 -0.3
 2.1
 -1.2
 0.2
36 MCM22 Mcm22p 853599 YJR135C 3.3 1.9









37 SIW14 putative tyrosine protein phosphatase SIW14 855699 YNL032W 3.2 1.4
 1.7








38 YGR016W uncharacterized protein 852899 YGR016W 3.2 1.2
 2.0








39 UGA3 Uga3p 851384 YDL170W 3.2 1.3
 1.8








40 SYS1 Sys1p 853453 YJL004C 3.2 1.8
 1.4








41 CUL3 cullin CUL3 852886 YGR003W 3.2 1.9
 1.3
 0.2
-0.5
 0.5
0.3
 1.2
1.2
 0.5
-0.1
 0.7
-0.2
 1.6
-1.1
 1.3
1.1
 0.9
0.8
 -0.0
-0.6
42 RPC25 DNA-directed RNA polymerase III subunit RPC25 853713 YKL144C 3.2 1.0
 2.1
 0.2
 1.5
 -0.7
 -1.4
 -0.0
 -1.6
 -0.3
 0.4
 1.6
43 HNT3 DNA 5'-adenosine monophosphate hydrolase 854432 YOR258W 3.1 1.9
 1.2
 -0.1
 -2.2
 -0.4
 1.1
 -0.5
 1.4
1.5
 -1.2
44 KXD1 Kxd1p 852801 YGL079W 3.1 1.5
 1.6








45 SMD2 mRNA splicing protein SMD2 850981 YLR275W 3.1 1.0
 2.0
 -0.7
 -0.7
 0.2
 6.3
 4.5
 2.8
 2.2
 1.0
 -0.2
46 HTL1 Htl1p 850384 YCR020W-B 3.1 1.8









47 TCA17 Tca17p 856663 YEL048C 3.1 1.7
 1.4








48 NUP53 FG-nucleoporin NUP53 855184 YMR153W 3.1 1.8
0.9
 2.9
 2.3
 3.2
 2.4
 5.0
 2.6
 2.8
 0.8
49 JLP2 Jlp2p 855162 YMR132C 3.1 1.5
 1.5
 -1.4
 -1.1
 0.1
 -0.9
 0.1
 0.3
 -0.4
-0.9
 -0.1
 -1.1
50 YLR287C uncharacterized protein 850993 YLR287C 3.0 1.7
 1.3








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