Orthologous genes in OrthoFinder**

Species Gene Description
 mmu-u.4   Pcf11   PCF11 cleavage and polyadenylation factor subunit 
 mmu-r.6   Pcf11   PCF11 cleavage and polyadenylation factor subunit 
 mmu-m.5   Pcf11   PCF11 cleavage and polyadenylation factor subunit 
 rno-u.3   Pcf11   PCF11 cleavage and polyadenylation factor subunit 
 hsa-u.4   PCF11   PCF11 cleavage and polyadenylation factor subunit 
 mcc-u.3   PCF11   PCF11 cleavage and polyadenylation factor subunit 
 cfa-u.3   PCF11   PCF11 cleavage and polyadenylation factor subunit 
 gga-u.3   PCF11   PCF11 cleavage and polyadenylation factor subunit 
 dre-u.3   pcf11   PCF11 cleavage and polyadenylation factor subunit 
 dme-u.3   Pcf11   Pcf11 cleavage and polyadenylation factor subunit 
 cel-u.3   pcf-11   CID domain-containing protein;Polyadenylation and cleavage factor homolog 11 
 sce-u.3   PCF11   Pcf11p 
 spo-u.3   SPCC63.03   DNAJC11 family protein 

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Top 50 coexpressed genes to Pcf11 (mmu-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 mmu3040   Spliceosome  5 126 4.48
 mmu5134   Legionellosis  2 61 -
 mmu4211   Longevity regulating pathway  2 90 -
 mmu4922   Glucagon signaling pathway  2 104 -
 mmu5205   Proteoglycans in cancer  2 205 -

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mmu:Pcf11 (PCF11 cleavage and polyadenylation factor subunit) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID CoexPub LINK Target Reference

mmu-u.4
for
Pcf11
mmu-r.6
for
Pcf11
mmu-m.5
for
Pcf11
rno-u.3
for
Pcf11
hsa-u.4
for
PCF11
mcc-u.3
for
PCF11
cfa-u.3
for
PCF11
gga-u.3
for
PCF11
dre-u.3
for
pcf11
dme-u.3
for
Pcf11
cel-u.3
for
pcf-11
sce-u.3
for
PCF11
spo-u.3
for
SPCC63.03
1 Ccnl1 cyclin L1 56706 0 8.7 7.8
 4.3
 6.6
 6.8
1.5
 3.5
 6.9
 7.9
5.6
 7.8
7.2
 1.2
 1.0

2 Arid4b AT rich interactive domain 4B (RBP1-like) 94246 0 8.4 7.1
 4.4
 8.4
6.0
 6.1
4.9
 5.4
5.3
 6.7
4.4
 5.2
5.0
 2.7
0.6
 2.3
 1.7
-0.7
3 Chd2 chromodomain helicase DNA binding protein 2 244059 0 8.3 7.4
 4.1
 5.3
3.4
 5.8
4.7
 6.4
1.3
 4.0
2.4
 4.4
4.3
 4.2
0.9
 1.0
 0.4
 -0.5
4 Ythdc1 YTH domain containing 1 231386 0 7.9 8.0
 3.4
 6.1
 7.4
 7.2
 4.3
 6.3
 2.1
 4.0


5 Clk1 CDC-like kinase 1 12747 0 7.7 6.9
 3.8
 5.9
4.5
 5.2
4.3
 7.7
6.2
 6.2
5.5
 6.5
6.2
 5.3
4.6
 2.7
 -0.0
 0.4
 -0.2
6 Arid4a AT rich interactive domain 4A (RBP1-like) 238247 0 7.5 8.0
 3.0
 8.4
6.0
 6.1
4.9
 5.4
5.3
 6.7
4.4
 5.2
5.0
 2.7
0.6
 2.3
 1.7
-0.7
7 Nipbl NIPBL cohesin loading factor 71175 0 7.3 7.7
 2.9
 7.6
 5.8
 6.2
 4.5
 5.1
1.0
 1.9
1.3
 2.3
 1.5
 0.3
 -0.5
8 Ankhd1 ankyrin repeat and KH domain containing 1 108857 0 7.0 7.6
 2.8
 3.4
2.2
 3.5
2.5
 4.3
1.9
 3.1
2.2
 5.0
1.7
 0.2
 1.5
 3.7

9 Topors topoisomerase I binding, arginine/serine-rich 106021 0 6.8 7.1
 2.8
 6.5
 4.7
 3.8
 5.5
 1.7
0.5
 3.8
1.7
 0.5
-1.0


10 Sirt1 sirtuin 1 93759 0 6.6 6.2
 3.2
 10.5
 5.3
 6.6
 2.2
 2.5
 1.1
 1.4
 0.5
 0.9
-0.0
11 Rsrc2 arginine/serine-rich coiled-coil 2 208606 0 6.6 6.0
 3.2
 5.4
 4.9
 5.1
 4.6
 4.7
 2.6
 4.2
 0.3

12 Nufip2 nuclear fragile X mental retardation protein interacting protein 2 68564 0 6.5 7.3
 2.4
 3.1
 6.1
 5.5
 3.4
 1.1
 1.5



13 Zbtb11 zinc finger and BTB domain containing 11 271377 0 6.5 7.0
 2.6
 4.9
 4.4
 4.5
 7.0
 1.3
 1.1



14 Smg1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase 233789 0 6.5 5.9
 3.2
 3.3
 4.8
 1.6
 3.7
 2.8
 1.6
 2.9
 1.6

15 Thoc2 THO complex 2 331401 0 6.5 6.1
 3.1
 4.9
4.3
 3.9
 1.8
 2.5
 7.0
 4.2
 2.4
 0.3
 -1.7
 -0.2
-1.5
16 Prpf38b PRP38 pre-mRNA processing factor 38 (yeast) domain containing B 66921 0 6.5 6.4
 2.9
 5.7
 5.7
 6.2
 3.9
 5.6
 3.2
 0.0
 -0.1

17 Bclaf1 BCL2-associated transcription factor 1 72567 0 6.4 6.9
 2.6
 4.6
 4.8
 2.6
 3.9
 3.4




18 Sf3b1 splicing factor 3b, subunit 1 81898 0 6.4 6.7
 2.6
 5.1
 3.9
 2.1
 4.4
 4.1
2.2
 1.2
 -0.2
 -1.2
19 Chd1 chromodomain helicase DNA binding protein 1 12648 0 6.3 6.5
 2.6
 5.3
3.4
 5.8
4.7
 6.4
1.3
 4.0
2.4
 4.4
4.3
 4.2
0.9
 1.0
 0.4
 -0.5
20 Zc3h11a zinc finger CCCH type containing 11A 70579 0 6.2 6.6
 2.5
 3.8
 4.1
 4.6
 3.6
 6.5
 7.4



21 Mllt10 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10 17354 0 6.2 7.5
 2.0
 2.8
2.3
 2.3
 4.5
 1.2
 0.3


22 Prpf4b pre-mRNA processing factor 4B 19134 0 6.1 6.4
 2.5
 6.5
 4.8
 3.2
 4.5
 5.3
 3.9
0.8
 1.9
 -0.6
-0.2
23 Ppp1r10 protein phosphatase 1, regulatory subunit 10 52040 0 6.0 6.1
4.9
 7.9
 2.1
 5.1
5.4
 8.1


24 Ppp4r3b protein phosphatase 4 regulatory subunit 3B 104570 0 6.0 5.6
 2.9
 4.1
4.1
 6.1
5.3
 3.4
3.3
 5.0
2.0
 2.0
1.3
 0.8
0.0
 3.8
 5.1
 -1.4
25 Pnisr PNN interacting serine/arginine-rich 66625 0 6.0 4.4
 3.6
 5.5
 4.3
 3.8
 4.0
 8.2
 5.7



26 Rsf1 remodeling and spacing factor 1 233532 0 6.0 6.6
 2.3
 6.2
 5.4
 3.3
 5.2
 5.8
 3.2
1.3
 0.2


27 Prpf39 pre-mRNA processing factor 39 328110 0 5.9 4.9
 3.2
 6.6
 2.4
 2.9
 5.0
2.9
2.1
 4.2
 1.3
 0.5
 -0.0
28 Rb1cc1 RB1-inducible coiled-coil 1 12421 0 5.9 5.3
 2.9
 4.4
 2.8
 2.9
 2.1
 3.1
 2.8
 4.7
 1.7

29 Zfp131 zinc finger protein 131 72465 0 5.9 5.8
 2.7
 7.6
 5.1
 3.5
 3.7
 2.5
 1.6
 1.9
1.2


30 Rock1 Rho-associated coiled-coil containing protein kinase 1 19877 0 5.9 5.5
 2.8
 3.3
1.9
 3.4
2.8
 3.3
0.5
 4.6
2.5
 4.0
2.5
 1.1
1.0
 1.7
 1.1

31 Zfp638 zinc finger protein 638 18139 0 5.9 5.2
 3.0
 5.0
 7.1
 6.2
 2.7
 1.4
 6.8



32 Resf1 retroelement silencing factor 1 67246 0 5.9 5.6
 2.7
 6.4
 5.3
 3.9
 2.6
 3.0




33 Clk4 CDC like kinase 4 12750 0 5.8 5.0
 3.1
 5.9
4.5
 5.2
4.3
 7.7
6.2
 6.2
5.5
 6.5
6.2
 5.3
4.6
 2.7
 -0.0
 0.4
 -0.2
34 Rlf rearranged L-myc fusion sequence 109263 0 5.8 4.7
 3.2
 4.9
 4.8
 4.1
 5.1
 3.4
 0.8



35 Zfp292 zinc finger protein 292 30046 0 5.8 6.2
 2.3
 2.6
 4.4
 2.6
 2.8
 3.6
 2.2
1.0



36 Baz2b bromodomain adjacent to zinc finger domain, 2B 407823 0 5.8 6.5
 2.1
 5.9
1.6
 1.9
 3.8
1.9
 4.1
1.4
 6.7
2.3
 3.3
1.9
 2.1
 0.2
0.2
37 Rbm26 RNA binding motif protein 26 74213 0 5.8 5.3
 2.8
 5.4
4.6
 3.6
2.8
 3.3
0.4
 4.1
3.7
 4.1
3.3
 1.2
0.6
 0.4
 2.3

38 Cnot4 CCR4-NOT transcription complex, subunit 4 53621 0 5.8 5.7
 2.5
 2.4
 4.0
 0.5
 2.0
 1.9
 1.2
0.2
 2.8
 4.7
 1.5
 0.0
39 Esco1 establishment of sister chromatid cohesion N-acetyltransferase 1 77805 0 5.7 2.9
 4.2
 4.2
0.8
 3.4
-0.7
 4.0
0.2
 2.9
-0.9
 2.2
-1.8
 2.0
-0.9
 -0.2
 -1.9
 0.9
40 Atrx ATRX, chromatin remodeler 22589 0 5.7 5.7
 2.5
 5.6
 3.5
 1.3
 1.6
 5.6
 2.0
 1.1
 0.6

41 Ddx5 DEAD box helicase 5 13207 0 5.7 5.6
 2.6
 5.6
1.0
 6.5
4.7
 6.4
5.9
 5.9
3.1
 3.7
2.4
 5.6
3.2
 3.1
1.6
 2.4
0.3
 -1.1
42 Cdk12 cyclin-dependent kinase 12 69131 0 5.7 6.9
 1.8
 3.7
2.9
 5.1
2.9
 2.9
2.0
 4.7
1.0
 5.2
0.6
 0.3
-0.1
 0.6
0.4
 0.4
-0.1
 2.6
0.6
43 Rbbp6 retinoblastoma binding protein 6, ubiquitin ligase 19647 1 5.7 3.8
 3.5
 11.4
 7.1
 7.3
 6.8
 8.9
 5.8
 3.8
 1.1
 -0.2
 1.7
1.1
44 Ddx46 DEAD box helicase 46 212880 0 5.6 5.1
 2.8
2.4
 4.1
 3.4
 6.1
 0.3
 0.4
1.0
 0.1
45 Sltm SAFB-like, transcription modulator 66660 0 5.6 5.2
 2.7
6.1
 7.7
 4.2
 5.7
 5.7
3.0

46 Ankrd12 ankyrin repeat domain 12 106585 0 5.6 5.7
 2.4
 4.5
 5.8
 4.5
 3.5
 2.9
 2.2
 1.2


47 Setd2 SET domain containing 2 235626 0 5.6 5.7
 2.4
 3.0
 4.2
 2.4
 3.7
 2.4
 3.6
 1.1
 4.8
0.1
 1.2
 -1.1
48 Cdk13 cyclin-dependent kinase 13 69562 0 5.5 6.5
 1.9
 3.7
2.9
 5.1
2.9
 2.9
2.0
 4.7
1.0
 5.2
0.6
 0.3
-0.1
 0.6
0.4
 0.4
-0.1
 2.6
0.6
49 Cep95 centrosomal protein 95 320162 0 5.5 4.9
 2.8
 1.9
 4.9
 3.9
 4.6
 -0.2




50 Ankrd11 ankyrin repeat domain 11 77087 0 5.5 5.7
 2.3
 4.5
 1.8
 2.2
 1.1
 5.8
 5.5



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