Orthologous genes in OrthoFinder**

Species Gene Description
 mmu-u.4   Tsr1   TSR1 20S rRNA accumulation 
 mmu-r.6   Tsr1   TSR1 20S rRNA accumulation 
 mmu-m.5   Tsr1   TSR1 20S rRNA accumulation 
 rno-u.3   Tsr1   TSR1, ribosome maturation factor 
 hsa-u.4   TSR1   TSR1 ribosome maturation factor 
 mcc-u.3   TSR1   TSR1 ribosome maturation factor 
 gga-u.3   TSR1   TSR1, ribosome maturation factor 
 dre-u.3   tsr1   TSR1 ribosome maturation factor 
 dme-u.3   Tsr1   Tsr1 ribosome assembly factor 
 cel-u.3   tag-151   Pre-rRNA-processing protein TSR1 homolog 
 sce-u.3   TSR1   Tsr1p 

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Top 50 coexpressed genes to Tsr1 (mmu-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 mmu3008   Ribosome biogenesis in eukaryotes  13 78 6.98
 mmu3020   RNA polymerase  1 32 -
 mmu970   Aminoacyl-tRNA biosynthesis  1 66 -
 mmu5017   Spinocerebellar ataxia  1 141 -

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mmu:Tsr1 (TSR1 20S rRNA accumulation) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID CoexPub LINK Target Reference

mmu-u.4
for
Tsr1
mmu-r.6
for
Tsr1
mmu-m.5
for
Tsr1
rno-u.3
for
Tsr1
hsa-u.4
for
TSR1
mcc-u.3
for
TSR1
gga-u.3
for
TSR1
dre-u.3
for
tsr1
dme-u.3
for
Tsr1
cel-u.3
for
tag-151
sce-u.3
for
TSR1
1 Ftsj3 FtsJ RNA methyltransferase homolog 3 (E. coli) 56095 0 12.8 13.7
 5.0
 9.6
 6.2
 4.6
 8.2
 11.2
 11.6
 4.6
 4.3
2 Wdr43 WD repeat domain 43 72515 0 12.7 10.9
 6.5
 10.2
 9.0
 4.9
 5.4
 9.0
 8.4
 7.2
 5.5
3 Ddx21 DExD box helicase 21 56200 0 12.6 12.4
 5.6
 8.4
 8.2
 6.0
 7.0
 5.0


4 Gnl3 guanine nucleotide binding protein-like 3 (nucleolar) 30877 0 12.0 11.1
 5.7
 7.7
 8.0
 5.4
 5.9



5 Nifk nucleolar protein interacting with the FHA domain of MKI67 67949 0 11.7 11.4
 5.2
 6.4
 5.3
 6.1
 3.5
 7.6
 4.1
 4.4
 1.9
6 Nolc1 nucleolar and coiled-body phosphoprotein 1 70769 0 11.6 11.6
 5.0
 7.9
 10.9
 9.5
 7.8
 8.1
7.1
 1.5
7 Rrp12 ribosomal RNA processing 12 homolog 107094 0 11.1 11.0
 4.9
 9.5
 5.5
 2.4
 8.4
 14.0
 8.8
 3.8
 6.2
8 Nop2 NOP2 nucleolar protein 110109 0 11.0 11.0
 4.8
 9.6
 7.8
 3.9
 12.3
 8.6
 11.4
 6.3
 7.8
9 Grwd1 glutamate-rich WD repeat containing 1 101612 0 10.9 11.0
 4.7
 5.5
 6.4
 5.0
5.6
 6.3
 7.8
 5.7
10 Wdr75 WD repeat domain 75 73674 0 10.7 11.3
 4.3
 3.2
 4.3
 3.1
 5.3
 7.8
 8.4
 7.2
 6.5
11 Pprc1 peroxisome proliferative activated receptor, gamma, coactivator-related 1 226169 0 10.7 9.7
 5.2
 7.1
 5.8
 4.6
 7.5
 5.7


12 Nop58 NOP58 ribonucleoprotein 55989 0 10.6 11.4
 4.2
 6.9
 5.6
 5.3
 4.6
 10.0
 7.1
 5.4
 1.9
13 Pwp2 PWP2 periodic tryptophan protein homolog (yeast) 110816 0 10.3 10.3
 4.5
 7.6
 2.7
 2.7
 7.5
 4.6
 10.6
 7.3
 5.8
14 Mak16 MAK16 homolog 67920 1 10.3 10.2
 4.5
 6.0
 9.2
 7.0
 5.4
 6.0
 4.8
 9.1
 4.8
15 Gtpbp4 GTP binding protein 4 69237 0 10.1 10.1
 4.4
 6.3
 8.8
 7.9
 6.3
 5.1
 3.0
 10.7
 6.8
16 Nop56 NOP56 ribonucleoprotein 67134 0 10.1 9.1
 4.9
 7.3
 6.8
 4.6
 6.8
 8.7
 7.3
 5.8
 0.7
17 Mybbp1a MYB binding protein (P160) 1a 18432 0 10.0 10.6
 4.0
 6.9
 12.4
 3.5
 7.9
 12.0
 8.5
2.9
18 Trmt61a tRNA methyltransferase 61A 328162 0 10.0 9.8
 4.5
 7.7
 3.1
 3.0
 2.3
 3.5
 2.9
 2.4
 3.3
19 Ppan peter pan homolog 235036 0 10.0 9.3
 4.7
 6.5
 6.4
 5.0
3.0
 5.9
 5.8
 8.7
 4.0
 2.9
0.9
20 Utp4 UTP4 small subunit processome component 21771 0 9.4 9.2
 4.2
 6.1
 5.9
 8.0
 7.9
 8.1
 5.4
 6.3
 7.8
21 Gpatch4 G patch domain containing 4 66614 0 9.4 9.3
 4.1
 5.9
 7.4
 6.4
 5.0
 4.5
 4.2
0.3
22 Sdad1 SDA1 domain containing 1 231452 0 9.1 10.5
 3.2
 8.2
 5.2
 4.9
 6.1
 4.7
 12.3
 4.3
 4.5
23 Wdr77 WD repeat domain 77 70465 0 8.9 8.3
 4.2
 6.5
 3.6
 7.3
 4.6
 4.6
 0.4

24 Rrp15 ribosomal RNA processing 15 homolog 67223 0 8.9 8.9
 3.9
 6.6
 6.1
 5.6
 6.3
 8.7
 4.6
 1.4
 0.8
25 Nop14 NOP14 nucleolar protein 75416 0 8.9 9.1
 3.7
 9.3
 8.5
 4.6
 3.2
 6.0
 9.7
 4.8
 6.3
26 Wdr3 WD repeat domain 3 269470 0 8.7 8.5
 3.9
 7.5
 9.6
 3.0
 8.1
 9.8
 7.8
 5.6
 5.9
27 Noc3l NOC3 like DNA replication regulator 57753 0 8.7 9.7
 3.2
 7.4
 6.5
 2.9
 4.3
 10.6
 10.9
 7.1
 5.6
28 Abce1 ATP-binding cassette, sub-family E (OABP), member 1 24015 0 8.5 9.1
 3.4
 7.1
 7.0
 5.3
 3.5
 8.2
 3.1
 5.7
 2.8
29 Utp20 UTP20 small subunit processome component 70683 0 8.4 8.1
 3.9
 5.4
 7.6
 5.8
 6.4
 10.5
 7.9
 5.7
 3.2
30 Nip7 NIP7, nucleolar pre-rRNA processing protein 66164 0 8.4 7.9
 4.0
 5.3
 5.9
 7.5
 4.6
 7.2
 5.6
 5.3
 2.9
31 Nsun2 NOL1/NOP2/Sun domain family member 2 28114 0 8.4 8.2
 3.8
 7.6
 7.9
 5.8
 4.2
 4.0
 5.0
 4.3
 2.1
32 Gar1 GAR1 ribonucleoprotein 68147 1 8.3 7.0
 4.4
 6.9
 3.7
 4.9
 4.4
 10.5
 5.5
 3.7
 2.4
33 Nol11 nucleolar protein 11 68979 0 8.3 8.8
 3.3
 7.3
 4.5
 5.6
 1.2
 4.7
 8.1

34 Urb2 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) 382038 1 8.2 8.0
 3.7
 2.4
 7.1
 7.0
 5.1
 2.5


35 Nol8 nucleolar protein 8 70930 0 8.1 8.1
 3.5
 6.7
 3.7
 3.8
 0.9
 4.5
 4.9

36 Nob1 NIN1/RPN12 binding protein 1 homolog 67619 0 8.0 8.2
 3.4
 3.6
 4.6
 5.1
 5.2
 3.1
 6.6
 9.0
 5.2
37 Thumpd1 THUMP domain containing 1 233802 0 8.0 6.9
 4.1
 3.4
 2.0
 0.1
 4.9
 5.9
 2.4
 0.6
 -0.0
38 Rars arginyl-tRNA synthetase 104458 0 8.0 7.6
 3.7
 5.2
 3.7
 4.9
 4.9
 6.4
 2.9
 5.8
39 Surf6 surfeit gene 6 20935 0 8.0 7.8
 3.6
 2.1
 4.9
 6.1
 5.0
 6.1
 6.5
 2.9
40 Polr1b polymerase (RNA) I polypeptide B 20017 0 8.0 8.9
 3.0
 6.5
 8.2
 2.5
 4.2
 9.4
 8.9
 4.2
 6.3
41 Ddx18 DEAD box helicase 18 66942 0 7.9 7.3
 3.8
 5.0
 5.9
 3.5
 7.0
 10.0
 9.0
 11.7
 3.8
42 Rrs1 ribosome biogenesis regulator 1 59014 1 7.9 7.7
 3.6
 6.7
 6.6
 3.6
 3.1
 6.1
 6.0
 8.0
 4.8
43 Pum3 pumilio RNA-binding family member 3 52874 0 7.9 8.1
 3.3
 7.7
 7.6
 4.5
 3.3
 9.4
 7.1
 11.3
 7.3
44 Heatr1 HEAT repeat containing 1 217995 0 7.9 9.4
 2.6
 9.6
 7.9
 4.9
 5.1
 8.5
 11.2
 7.7
 6.3
45 Bysl bystin-like 53414 1 7.8 7.5
 3.5
 6.7
 6.8
 7.5
 5.5
 7.8
 8.1
 15.5
 6.4
46 Naa25 N(alpha)-acetyltransferase 25, NatB auxiliary subunit 231713 0 7.7 7.3
 3.6
 4.7
 6.5
 2.9
 5.0
 3.4
 1.6
 2.7
 -1.0
47 Pdcd11 programmed cell death 11 18572 0 7.7 6.9
 3.8
 3.2
 8.4
 4.9
 4.8
 9.3
 11.4
 6.5
 5.8
48 Utp15 UTP15 small subunit processome component 105372 0 7.5 7.3
 3.4
 5.8
 6.4
 4.2
 4.2
 10.6
 6.7
 3.8
 3.1
49 Ltv1 LTV1 ribosome biogenesis factor 353258 0 7.5 7.5
 3.3
 5.1
 7.9
 4.2
 3.9
 6.4
 2.2
 9.8
 3.7
50 Brix1 BRX1, biogenesis of ribosomes 67832 0 7.4 6.8
 3.6
 5.2
 6.0
 3.7
 3.3
 8.1
 8.6
 6.1
 3.5
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